RNA–Protein interactions for RNA: ENST00000402142.3

CACNA1I-202, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1I, Length 10,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-202ENST00000402142 Q5VSD8 79 aa7.71□□□□□ -1.17
CACNA1I-202ENST00000402142 DCHS2Q6V1P9 2916 aa7.71□□□□□ -1.18
CACNA1I-202ENST00000402142 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
CACNA1I-202ENST00000402142 TENM4Q6N022 2769 aa7.66□□□□□ -1.18
CACNA1I-202ENST00000402142 VWFP04275 2813 aa7.64□□□□□ -1.19
CACNA1I-202ENST00000402142 LAMA1P25391 3075 aa7.64□□□□□ -1.19
CACNA1I-202ENST00000402142 HTTP42858 3142 aa7.63□□□□□ -1.19
CACNA1I-202ENST00000402142 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
CACNA1I-202ENST00000402142 FBN2P35556 2912 aa7.59□□□□□ -1.2
CACNA1I-202ENST00000402142 KRTAP1-5Q9BYS1 174 aa7.58□□□□□ -1.2
CACNA1I-202ENST00000402142 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
CACNA1I-202ENST00000402142 Q6ZRN7 208 aaPredicted RBP7.58□□□□□ -1.2
CACNA1I-202ENST00000402142 REV3LO60673 3130 aa7.56□□□□□ -1.2
CACNA1I-202ENST00000402142 KRTAP1-1Q07627 177 aa7.56□□□□□ -1.2
CACNA1I-202ENST00000402142 KRTAP1-3Q8IUG1 177 aa7.55□□□□□ -1.2
CACNA1I-202ENST00000402142 H0YAA0 97 aa7.52□□□□□ -1.21
CACNA1I-202ENST00000402142 XIRP2A4UGR9 3374 aa7.49□□□□□ -1.21
CACNA1I-202ENST00000402142 MXRA5Q9NR99 2828 aa7.49□□□□□ -1.21
CACNA1I-202ENST00000402142 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
CACNA1I-202ENST00000402142 LAMA3Q16787 3333 aa7.47□□□□□ -1.21
CACNA1I-202ENST00000402142 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
CACNA1I-202ENST00000402142 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
CACNA1I-202ENST00000402142 BRCA2P51587 3418 aa7.42□□□□□ -1.22
CACNA1I-202ENST00000402142 BOD1L1Q8NFC6 3051 aa7.41□□□□□ -1.22
CACNA1I-202ENST00000402142 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.22
CACNA1I-202ENST00000402142 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
CACNA1I-202ENST00000402142 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
CACNA1I-202ENST00000402142 ATMQ13315 3056 aa7.37□□□□□ -1.23
CACNA1I-202ENST00000402142 ADGRG4Q8IZF6 3080 aa7.35□□□□□ -1.23
CACNA1I-202ENST00000402142 DNAH14Q0VDD8 3507 aa7.34□□□□□ -1.23
CACNA1I-202ENST00000402142 DMXL1Q9Y485 3027 aa7.34□□□□□ -1.24
CACNA1I-202ENST00000402142 INE1O15225 51 aa7.32□□□□□ -1.24
CACNA1I-202ENST00000402142 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
CACNA1I-202ENST00000402142 COL6A3P12111 3177 aa7.3□□□□□ -1.24
CACNA1I-202ENST00000402142 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
CACNA1I-202ENST00000402142 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
CACNA1I-202ENST00000402142 USP34Q70CQ2 3546 aa7.24□□□□□ -1.25
CACNA1I-202ENST00000402142 CELSR1Q9NYQ6 3014 aa7.23□□□□□ -1.25
CACNA1I-202ENST00000402142 CELSR3Q9NYQ7 3312 aa7.2□□□□□ -1.26
CACNA1I-202ENST00000402142 UNC80Q8N2C7 3258 aa7.17□□□□□ -1.26
CACNA1I-202ENST00000402142 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
CACNA1I-202ENST00000402142 KRTAP7-1Q8IUC3 87 aa7.12□□□□□ -1.27
CACNA1I-202ENST00000402142 VCANP13611 3396 aa7.12□□□□□ -1.27
CACNA1I-202ENST00000402142 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CACNA1I-202ENST00000402142 CDH23Q9H251 3354 aa7.09□□□□□ -1.27
CACNA1I-202ENST00000402142 CFAP47Q6ZTR5 3102 aa7.08□□□□□ -1.28
CACNA1I-202ENST00000402142 FBN1P35555 2871 aaKnown RBP7.08□□□□□ -1.28
CACNA1I-202ENST00000402142 TPRXLQ17RH7 258 aa7.06□□□□□ -1.28
CACNA1I-202ENST00000402142 XP32Q5T750 250 aa7.05□□□□□ -1.28
CACNA1I-202ENST00000402142 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
CACNA1I-202ENST00000402142 MYO15AQ9UKN7 3530 aa7.02□□□□□ -1.29
CACNA1I-202ENST00000402142 EYSQ5T1H1 3165 aa6.96□□□□□ -1.3
CACNA1I-202ENST00000402142 SZT2Q5T011 3432 aa6.95□□□□□ -1.3
CACNA1I-202ENST00000402142 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
CACNA1I-202ENST00000402142 SPEGQ15772 3267 aa6.87□□□□□ -1.31
CACNA1I-202ENST00000402142 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
CACNA1I-202ENST00000402142 KRTAP13-3Q3SY46 172 aa6.83□□□□□ -1.32
CACNA1I-202ENST00000402142 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
CACNA1I-202ENST00000402142 WDFY3Q8IZQ1 3526 aa6.82□□□□□ -1.32
CACNA1I-202ENST00000402142 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
CACNA1I-202ENST00000402142 MEGF8Q7Z7M0 2845 aa6.81□□□□□ -1.32
CACNA1I-202ENST00000402142 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
CACNA1I-202ENST00000402142 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
CACNA1I-202ENST00000402142 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
CACNA1I-202ENST00000402142 ASPMQ8IZT6 3477 aa6.69□□□□□ -1.34
CACNA1I-202ENST00000402142 LOC400499M0QZD8 3231 aa6.67□□□□□ -1.34
CACNA1I-202ENST00000402142 OTOGQ6ZRI0 2925 aa6.62□□□□□ -1.35
CACNA1I-202ENST00000402142 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CACNA1I-202ENST00000402142 LAMA5O15230 3695 aa6.6□□□□□ -1.35
CACNA1I-202ENST00000402142 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
CACNA1I-202ENST00000402142 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
CACNA1I-202ENST00000402142 DMDP11532 3685 aa6.51□□□□□ -1.37
CACNA1I-202ENST00000402142 SPENQ96T58 3664 aaKnown RBP6.5□□□□□ -1.37
CACNA1I-202ENST00000402142 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
CACNA1I-202ENST00000402142 DCHS1Q96JQ0 3298 aa6.47□□□□□ -1.37
CACNA1I-202ENST00000402142 ZFHX4Q86UP3 3567 aa6.47□□□□□ -1.37
CACNA1I-202ENST00000402142 SMG1Q96Q15 3661 aaKnown RBP6.43□□□□□ -1.38
CACNA1I-202ENST00000402142 CSMD1Q96PZ7 3565 aa6.38□□□□□ -1.39
CACNA1I-202ENST00000402142 RELNP78509 3460 aa6.38□□□□□ -1.39
CACNA1I-202ENST00000402142 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
CACNA1I-202ENST00000402142 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
CACNA1I-202ENST00000402142 VPS13CQ709C8 3753 aa6.22□□□□□ -1.41
CACNA1I-202ENST00000402142 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
CACNA1I-202ENST00000402142 TRRAPQ9Y4A5 3859 aa6.21□□□□□ -1.42
CACNA1I-202ENST00000402142 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
CACNA1I-202ENST00000402142 AKAP9Q99996 3911 aa6.08□□□□□ -1.44
CACNA1I-202ENST00000402142 SVEP1Q4LDE5 3571 aa6.07□□□□□ -1.44
CACNA1I-202ENST00000402142 CUBNO60494 3623 aa6.02□□□□□ -1.45
CACNA1I-202ENST00000402142 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
CACNA1I-202ENST00000402142 BSNQ9UPA5 3926 aa5.94□□□□□ -1.46
CACNA1I-202ENST00000402142 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
CACNA1I-202ENST00000402142 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
CACNA1I-202ENST00000402142 MUC3AQ02505 3323 aa5.85□□□□□ -1.47
CACNA1I-202ENST00000402142 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
CACNA1I-202ENST00000402142 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
CACNA1I-202ENST00000402142 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
CACNA1I-202ENST00000402142 CSMD3Q7Z407 3707 aa5.76□□□□□ -1.49
CACNA1I-202ENST00000402142 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
CACNA1I-202ENST00000402142 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
CACNA1I-202ENST00000402142 DNAH3Q8TD57 4116 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms