RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SMR3BP02814 79 aaPredicted RBP5.62□□□□□ -1.51
PTPRM-203ENST00000400060 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
PTPRM-203ENST00000400060 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
PTPRM-203ENST00000400060 NBEAL1Q6ZS30 2694 aa5.61□□□□□ -1.51
PTPRM-203ENST00000400060 ASPMQ8IZT6 3477 aa5.57□□□□□ -1.52
PTPRM-203ENST00000400060 J3QL48 77 aa5.57□□□□□ -1.52
PTPRM-203ENST00000400060 UTP20O75691 2785 aaKnown RBP5.57□□□□□ -1.52
PTPRM-203ENST00000400060 TACC2O95359 2948 aa5.57□□□□□ -1.52
PTPRM-203ENST00000400060 FLG2Q5D862 2391 aaPredicted RBP5.56□□□□□ -1.52
PTPRM-203ENST00000400060 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
PTPRM-203ENST00000400060 CFAP47Q6ZTR5 3102 aa5.56□□□□□ -1.52
PTPRM-203ENST00000400060 NSD1Q96L73 2696 aaPredicted RBP5.55□□□□□ -1.52
PTPRM-203ENST00000400060 M0QZ58 72 aa5.55□□□□□ -1.52
PTPRM-203ENST00000400060 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
PTPRM-203ENST00000400060 ZZEF1O43149 2961 aa5.53□□□□□ -1.52
PTPRM-203ENST00000400060 ZFHX4Q86UP3 3567 aa5.53□□□□□ -1.52
PTPRM-203ENST00000400060 LAMA5O15230 3695 aa5.52□□□□□ -1.53
PTPRM-203ENST00000400060 HRNRQ86YZ3 2850 aaPredicted RBP5.51□□□□□ -1.53
PTPRM-203ENST00000400060 KMT2BQ9UMN6 2715 aaPredicted RBP5.51□□□□□ -1.53
PTPRM-203ENST00000400060 P0C880 135 aa5.51□□□□□ -1.53
PTPRM-203ENST00000400060 APCP25054 2843 aa5.5□□□□□ -1.53
PTPRM-203ENST00000400060 ZANQ9Y493 2812 aa5.5□□□□□ -1.53
PTPRM-203ENST00000400060 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.53
PTPRM-203ENST00000400060 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
PTPRM-203ENST00000400060 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
PTPRM-203ENST00000400060 HIVEP1P15822 2718 aa5.46□□□□□ -1.54
PTPRM-203ENST00000400060 KRTAP10-1P60331 282 aa5.45□□□□□ -1.54
PTPRM-203ENST00000400060 DCHS1Q96JQ0 3298 aa5.45□□□□□ -1.54
PTPRM-203ENST00000400060 KRTAP10-2P60368 255 aa5.45□□□□□ -1.54
PTPRM-203ENST00000400060 STAB2Q8WWQ8 2551 aa5.44□□□□□ -1.54
PTPRM-203ENST00000400060 ASH1LQ9NR48 2969 aaKnown RBP5.43□□□□□ -1.54
PTPRM-203ENST00000400060 R4GN34 69 aa5.43□□□□□ -1.54
PTPRM-203ENST00000400060 BAHCC1Q9P281 2608 aa5.43□□□□□ -1.54
PTPRM-203ENST00000400060 SPENQ96T58 3664 aaKnown RBP5.42□□□□□ -1.54
PTPRM-203ENST00000400060 CELSR2Q9HCU4 2923 aa5.39□□□□□ -1.55
PTPRM-203ENST00000400060 KRTAP13-2Q52LG2 175 aa5.39□□□□□ -1.55
PTPRM-203ENST00000400060 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
PTPRM-203ENST00000400060 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
PTPRM-203ENST00000400060 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
PTPRM-203ENST00000400060 NF1P21359 2839 aa5.34□□□□□ -1.55
PTPRM-203ENST00000400060 DCHS2Q6V1P9 2916 aa5.33□□□□□ -1.56
PTPRM-203ENST00000400060 FBN2P35556 2912 aa5.33□□□□□ -1.56
PTPRM-203ENST00000400060 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
PTPRM-203ENST00000400060 RELNP78509 3460 aa5.33□□□□□ -1.56
PTPRM-203ENST00000400060 SMG1Q96Q15 3661 aaKnown RBP5.32□□□□□ -1.56
PTPRM-203ENST00000400060 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
PTPRM-203ENST00000400060 MXRA5Q9NR99 2828 aa5.29□□□□□ -1.56
PTPRM-203ENST00000400060 Q5VSD8 79 aa5.25□□□□□ -1.57
PTPRM-203ENST00000400060 CRYBG3Q68DQ2 2970 aa5.24□□□□□ -1.57
PTPRM-203ENST00000400060 TENM4Q6N022 2769 aa5.2□□□□□ -1.58
PTPRM-203ENST00000400060 M0R2T5 61 aa5.18□□□□□ -1.58
PTPRM-203ENST00000400060 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.58
PTPRM-203ENST00000400060 TNP1P09430 55 aa5.14□□□□□ -1.59
PTPRM-203ENST00000400060 KRTAP21-3Q3LHN1 58 aa5.12□□□□□ -1.59
PTPRM-203ENST00000400060 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
PTPRM-203ENST00000400060 CSMD1Q96PZ7 3565 aa5.11□□□□□ -1.59
PTPRM-203ENST00000400060 SVEP1Q4LDE5 3571 aa5.11□□□□□ -1.59
PTPRM-203ENST00000400060 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
PTPRM-203ENST00000400060 CELSR1Q9NYQ6 3014 aa5.1□□□□□ -1.59
PTPRM-203ENST00000400060 XP32Q5T750 250 aa5.08□□□□□ -1.6
PTPRM-203ENST00000400060 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
PTPRM-203ENST00000400060 PDZD2O15018 2839 aa5.06□□□□□ -1.6
PTPRM-203ENST00000400060 INE1O15225 51 aa5.05□□□□□ -1.6
PTPRM-203ENST00000400060 ZFHX3Q15911 3703 aa5.05□□□□□ -1.6
PTPRM-203ENST00000400060 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
PTPRM-203ENST00000400060 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
PTPRM-203ENST00000400060 VPS13CQ709C8 3753 aa5.02□□□□□ -1.61
PTPRM-203ENST00000400060 TENM1Q9UKZ4 2725 aa5.01□□□□□ -1.61
PTPRM-203ENST00000400060 KRTAP13-4Q3LI77 160 aa5.01□□□□□ -1.61
PTPRM-203ENST00000400060 CSMD2Q7Z408 3487 aa5.01□□□□□ -1.61
PTPRM-203ENST00000400060 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
PTPRM-203ENST00000400060 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
PTPRM-203ENST00000400060 VWFP04275 2813 aa4.94□□□□□ -1.62
PTPRM-203ENST00000400060 ALMS1Q8TCU4 4167 aa4.91□□□□□ -1.62
PTPRM-203ENST00000400060 OTOGQ6ZRI0 2925 aa4.9□□□□□ -1.62
PTPRM-203ENST00000400060 TGP01266 2768 aa4.88□□□□□ -1.63
PTPRM-203ENST00000400060 NBPF19A0A087WUL8 3843 aa4.87□□□□□ -1.63
PTPRM-203ENST00000400060 TENM2Q9NT68 2774 aa4.87□□□□□ -1.63
PTPRM-203ENST00000400060 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
PTPRM-203ENST00000400060 ZNF469Q96JG9 3925 aaPredicted RBP4.84□□□□□ -1.64
PTPRM-203ENST00000400060 FBN1P35555 2871 aaKnown RBP4.83□□□□□ -1.64
PTPRM-203ENST00000400060 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PTPRM-203ENST00000400060 A0A1B0GVY2 172 aa4.78□□□□□ -1.65
PTPRM-203ENST00000400060 PKD1L1Q8TDX9 2849 aa4.77□□□□□ -1.65
PTPRM-203ENST00000400060 ANK3Q12955 4377 aaKnown RBP4.77□□□□□ -1.65
PTPRM-203ENST00000400060 KRTAP3-3Q9BYR6 98 aa4.77□□□□□ -1.65
PTPRM-203ENST00000400060 CUBNO60494 3623 aa4.76□□□□□ -1.65
PTPRM-203ENST00000400060 AKAP9Q99996 3911 aa4.72□□□□□ -1.65
PTPRM-203ENST00000400060 FBN3Q75N90 2809 aa4.66□□□□□ -1.66
PTPRM-203ENST00000400060 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
PTPRM-203ENST00000400060 MEGF8Q7Z7M0 2845 aa4.6□□□□□ -1.67
PTPRM-203ENST00000400060 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
PTPRM-203ENST00000400060 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
PTPRM-203ENST00000400060 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
PTPRM-203ENST00000400060 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
PTPRM-203ENST00000400060 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
PTPRM-203ENST00000400060 MT1HL1P0DM35 61 aa4.4□□□□□ -1.7
PTPRM-203ENST00000400060 ANK2Q01484 3957 aa4.34□□□□□ -1.71
PTPRM-203ENST00000400060 CMYA5Q8N3K9 4069 aa4.33□□□□□ -1.72
PTPRM-203ENST00000400060 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms