RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-218ENST00000399644 SMG1Q96Q15 3661 aaKnown RBP6.14□□□□□ -1.43
CACNA1C-218ENST00000399644 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
CACNA1C-218ENST00000399644 TEP1Q99973 2627 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-218ENST00000399644 TNRC18O15417 2968 aaPredicted RBP6.12□□□□□ -1.43
CACNA1C-218ENST00000399644 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-218ENST00000399644 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-218ENST00000399644 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
CACNA1C-218ENST00000399644 MAP1AP78559 2803 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-218ENST00000399644 DMXL2Q8TDJ6 3036 aa6.09□□□□□ -1.43
CACNA1C-218ENST00000399644 DMXL1Q9Y485 3027 aa6.09□□□□□ -1.43
CACNA1C-218ENST00000399644 RELNP78509 3460 aa6.08□□□□□ -1.44
CACNA1C-218ENST00000399644 TEX15Q9BXT5 2789 aa6.08□□□□□ -1.44
CACNA1C-218ENST00000399644 ZZEF1O43149 2961 aa6.06□□□□□ -1.44
CACNA1C-218ENST00000399644 TACC2O95359 2948 aa6.06□□□□□ -1.44
CACNA1C-218ENST00000399644 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
CACNA1C-218ENST00000399644 ATMQ13315 3056 aa6.05□□□□□ -1.44
CACNA1C-218ENST00000399644 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
CACNA1C-218ENST00000399644 MUC3AQ02505 3323 aa6.02□□□□□ -1.45
CACNA1C-218ENST00000399644 SVEP1Q4LDE5 3571 aa6.01□□□□□ -1.45
CACNA1C-218ENST00000399644 COL12A1Q99715 3063 aa6□□□□□ -1.45
CACNA1C-218ENST00000399644 CENPEQ02224 2701 aa6□□□□□ -1.45
CACNA1C-218ENST00000399644 NBEAL1Q6ZS30 2694 aa5.99□□□□□ -1.45
CACNA1C-218ENST00000399644 ZNF292O60281 2723 aa5.98□□□□□ -1.45
CACNA1C-218ENST00000399644 COL6A5A8TX70 2615 aa5.98□□□□□ -1.45
CACNA1C-218ENST00000399644 NOTCH1P46531 2555 aa5.96□□□□□ -1.46
CACNA1C-218ENST00000399644 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
CACNA1C-218ENST00000399644 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
CACNA1C-218ENST00000399644 XP32Q5T750 250 aa5.93□□□□□ -1.46
CACNA1C-218ENST00000399644 STAB2Q8WWQ8 2551 aa5.92□□□□□ -1.46
CACNA1C-218ENST00000399644 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
CACNA1C-218ENST00000399644 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.47
CACNA1C-218ENST00000399644 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
CACNA1C-218ENST00000399644 CHD6Q8TD26 2715 aa5.88□□□□□ -1.47
CACNA1C-218ENST00000399644 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
CACNA1C-218ENST00000399644 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.47
CACNA1C-218ENST00000399644 H0YAA0 97 aa5.83□□□□□ -1.48
CACNA1C-218ENST00000399644 CUBNO60494 3623 aa5.81□□□□□ -1.48
CACNA1C-218ENST00000399644 GCN1Q92616 2671 aaKnown RBP5.79□□□□□ -1.48
CACNA1C-218ENST00000399644 IGSF10Q6WRI0 2623 aa5.77□□□□□ -1.49
CACNA1C-218ENST00000399644 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
CACNA1C-218ENST00000399644 CRYBG3Q68DQ2 2970 aa5.76□□□□□ -1.49
CACNA1C-218ENST00000399644 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
CACNA1C-218ENST00000399644 UTP20O75691 2785 aaKnown RBP5.76□□□□□ -1.49
CACNA1C-218ENST00000399644 ITPR2Q14571 2701 aa5.75□□□□□ -1.49
CACNA1C-218ENST00000399644 BSNQ9UPA5 3926 aa5.75□□□□□ -1.49
CACNA1C-218ENST00000399644 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
CACNA1C-218ENST00000399644 HRNRQ86YZ3 2850 aaPredicted RBP5.73□□□□□ -1.49
CACNA1C-218ENST00000399644 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
CACNA1C-218ENST00000399644 ITPR1Q14643 2758 aa5.72□□□□□ -1.49
CACNA1C-218ENST00000399644 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
CACNA1C-218ENST00000399644 CELSR1Q9NYQ6 3014 aa5.68□□□□□ -1.5
CACNA1C-218ENST00000399644 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
CACNA1C-218ENST00000399644 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
CACNA1C-218ENST00000399644 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
CACNA1C-218ENST00000399644 DCHS2Q6V1P9 2916 aa5.65□□□□□ -1.5
CACNA1C-218ENST00000399644 VPS13CQ709C8 3753 aa5.65□□□□□ -1.5
CACNA1C-218ENST00000399644 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
CACNA1C-218ENST00000399644 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
CACNA1C-218ENST00000399644 FLNCQ14315 2725 aa5.59□□□□□ -1.51
CACNA1C-218ENST00000399644 FBN2P35556 2912 aa5.59□□□□□ -1.51
CACNA1C-218ENST00000399644 ZANQ9Y493 2812 aa5.58□□□□□ -1.52
CACNA1C-218ENST00000399644 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
CACNA1C-218ENST00000399644 HIVEP1P15822 2718 aa5.56□□□□□ -1.52
CACNA1C-218ENST00000399644 TENM4Q6N022 2769 aa5.55□□□□□ -1.52
CACNA1C-218ENST00000399644 APCP25054 2843 aa5.53□□□□□ -1.52
CACNA1C-218ENST00000399644 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
CACNA1C-218ENST00000399644 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
CACNA1C-218ENST00000399644 NF1P21359 2839 aa5.4□□□□□ -1.54
CACNA1C-218ENST00000399644 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
CACNA1C-218ENST00000399644 MXRA5Q9NR99 2828 aa5.34□□□□□ -1.56
CACNA1C-218ENST00000399644 ANK3Q12955 4377 aaKnown RBP5.31□□□□□ -1.56
CACNA1C-218ENST00000399644 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
CACNA1C-218ENST00000399644 AKAP9Q99996 3911 aa5.28□□□□□ -1.56
CACNA1C-218ENST00000399644 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
CACNA1C-218ENST00000399644 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
CACNA1C-218ENST00000399644 TRRAPQ9Y4A5 3859 aa5.27□□□□□ -1.57
CACNA1C-218ENST00000399644 INE1O15225 51 aa5.26□□□□□ -1.57
CACNA1C-218ENST00000399644 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
CACNA1C-218ENST00000399644 NIPBLQ6KC79 2804 aaeCLIP5.24□□□□□ -1.57
CACNA1C-218ENST00000399644 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
CACNA1C-218ENST00000399644 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CACNA1C-218ENST00000399644 CSMD3Q7Z407 3707 aa5.17□□□□□ -1.58
CACNA1C-218ENST00000399644 PDZD2O15018 2839 aa5.11□□□□□ -1.59
CACNA1C-218ENST00000399644 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
CACNA1C-218ENST00000399644 TENM3Q9P273 2699 aa5.08□□□□□ -1.6
CACNA1C-218ENST00000399644 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
CACNA1C-218ENST00000399644 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
CACNA1C-218ENST00000399644 FBN1P35555 2871 aaKnown RBP5.03□□□□□ -1.6
CACNA1C-218ENST00000399644 VWFP04275 2813 aa5.02□□□□□ -1.61
CACNA1C-218ENST00000399644 HUWE1Q7Z6Z7 4374 aaKnown RBP5□□□□□ -1.61
CACNA1C-218ENST00000399644 PKD1L1Q8TDX9 2849 aa4.98□□□□□ -1.61
CACNA1C-218ENST00000399644 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
CACNA1C-218ENST00000399644 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
CACNA1C-218ENST00000399644 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
CACNA1C-218ENST00000399644 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
CACNA1C-218ENST00000399644 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CACNA1C-218ENST00000399644 TGP01266 2768 aa4.9□□□□□ -1.63
CACNA1C-218ENST00000399644 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
CACNA1C-218ENST00000399644 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
CACNA1C-218ENST00000399644 DNAH10Q8IVF4 4471 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms