RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
CACNA1C-213ENST00000399629 SETXQ7Z333 2677 aaKnown RBP6.38□□□□□ -1.39
CACNA1C-213ENST00000399629 LAMA5O15230 3695 aa6.37□□□□□ -1.39
CACNA1C-213ENST00000399629 AKAP13Q12802 2813 aa6.37□□□□□ -1.39
CACNA1C-213ENST00000399629 PP632Q6XCG6 107 aa6.36□□□□□ -1.39
CACNA1C-213ENST00000399629 KMT2BQ9UMN6 2715 aaPredicted RBP6.36□□□□□ -1.39
CACNA1C-213ENST00000399629 A6NN06 94 aa6.35□□□□□ -1.39
CACNA1C-213ENST00000399629 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
CACNA1C-213ENST00000399629 COL6A5A8TX70 2615 aa6.33□□□□□ -1.4
CACNA1C-213ENST00000399629 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
CACNA1C-213ENST00000399629 UNC79Q9P2D8 2635 aa6.32□□□□□ -1.4
CACNA1C-213ENST00000399629 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-213ENST00000399629 LOC400499M0QZD8 3231 aa6.29□□□□□ -1.4
CACNA1C-213ENST00000399629 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
CACNA1C-213ENST00000399629 ITPR2Q14571 2701 aa6.29□□□□□ -1.4
CACNA1C-213ENST00000399629 LRBAP50851 2863 aa6.27□□□□□ -1.41
CACNA1C-213ENST00000399629 COL12A1Q99715 3063 aa6.25□□□□□ -1.41
CACNA1C-213ENST00000399629 ATMQ13315 3056 aa6.24□□□□□ -1.41
CACNA1C-213ENST00000399629 CSMD1Q96PZ7 3565 aa6.24□□□□□ -1.41
CACNA1C-213ENST00000399629 RELNP78509 3460 aa6.24□□□□□ -1.41
CACNA1C-213ENST00000399629 DSPP15924 2871 aaKnown RBP6.24□□□□□ -1.41
CACNA1C-213ENST00000399629 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
CACNA1C-213ENST00000399629 CENPEQ02224 2701 aa6.21□□□□□ -1.41
CACNA1C-213ENST00000399629 ADGRG4Q8IZF6 3080 aa6.21□□□□□ -1.42
CACNA1C-213ENST00000399629 DMXL2Q8TDJ6 3036 aa6.21□□□□□ -1.42
CACNA1C-213ENST00000399629 KALRNO60229 2985 aa6.21□□□□□ -1.42
CACNA1C-213ENST00000399629 IGSF10Q6WRI0 2623 aa6.19□□□□□ -1.42
CACNA1C-213ENST00000399629 MAP1AP78559 2803 aaPredicted RBP6.17□□□□□ -1.42
CACNA1C-213ENST00000399629 GCN1Q92616 2671 aaKnown RBP6.16□□□□□ -1.42
CACNA1C-213ENST00000399629 ZNF292O60281 2723 aa6.15□□□□□ -1.43
CACNA1C-213ENST00000399629 SMG1Q96Q15 3661 aaKnown RBP6.15□□□□□ -1.43
CACNA1C-213ENST00000399629 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
CACNA1C-213ENST00000399629 STAB2Q8WWQ8 2551 aa6.13□□□□□ -1.43
CACNA1C-213ENST00000399629 CRYBG3Q68DQ2 2970 aa6.12□□□□□ -1.43
CACNA1C-213ENST00000399629 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
CACNA1C-213ENST00000399629 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
CACNA1C-213ENST00000399629 NOTCH1P46531 2555 aa6.1□□□□□ -1.43
CACNA1C-213ENST00000399629 SVEP1Q4LDE5 3571 aa6.08□□□□□ -1.44
CACNA1C-213ENST00000399629 SPENQ96T58 3664 aaKnown RBP6.08□□□□□ -1.44
CACNA1C-213ENST00000399629 NBEAQ8NFP9 2946 aa6.07□□□□□ -1.44
CACNA1C-213ENST00000399629 NBEAL2Q6ZNJ1 2754 aa6.05□□□□□ -1.44
CACNA1C-213ENST00000399629 H0YAA0 97 aa6.04□□□□□ -1.44
CACNA1C-213ENST00000399629 ASH1LQ9NR48 2969 aaKnown RBP6.01□□□□□ -1.45
CACNA1C-213ENST00000399629 TACC2O95359 2948 aa5.97□□□□□ -1.45
CACNA1C-213ENST00000399629 UBR5O95071 2799 aaPredicted RBP5.95□□□□□ -1.46
CACNA1C-213ENST00000399629 CUBNO60494 3623 aa5.94□□□□□ -1.46
CACNA1C-213ENST00000399629 ZZEF1O43149 2961 aa5.93□□□□□ -1.46
CACNA1C-213ENST00000399629 HIVEP1P15822 2718 aa5.91□□□□□ -1.46
CACNA1C-213ENST00000399629 UTP20O75691 2785 aaKnown RBP5.9□□□□□ -1.47
CACNA1C-213ENST00000399629 APCP25054 2843 aa5.87□□□□□ -1.47
CACNA1C-213ENST00000399629 ITPR1Q14643 2758 aa5.86□□□□□ -1.47
CACNA1C-213ENST00000399629 TENM4Q6N022 2769 aa5.86□□□□□ -1.47
CACNA1C-213ENST00000399629 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
CACNA1C-213ENST00000399629 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
CACNA1C-213ENST00000399629 KRTAP12-2P59991 146 aa5.84□□□□□ -1.48
CACNA1C-213ENST00000399629 CSMD2Q7Z408 3487 aa5.82□□□□□ -1.48
CACNA1C-213ENST00000399629 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
CACNA1C-213ENST00000399629 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CACNA1C-213ENST00000399629 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
CACNA1C-213ENST00000399629 VPS13CQ709C8 3753 aa5.75□□□□□ -1.49
CACNA1C-213ENST00000399629 TENM2Q9NT68 2774 aa5.71□□□□□ -1.5
CACNA1C-213ENST00000399629 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
CACNA1C-213ENST00000399629 CELSR2Q9HCU4 2923 aa5.67□□□□□ -1.5
CACNA1C-213ENST00000399629 CELSR1Q9NYQ6 3014 aa5.65□□□□□ -1.5
CACNA1C-213ENST00000399629 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
CACNA1C-213ENST00000399629 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
CACNA1C-213ENST00000399629 FLNCQ14315 2725 aa5.59□□□□□ -1.52
CACNA1C-213ENST00000399629 TENM1Q9UKZ4 2725 aa5.58□□□□□ -1.52
CACNA1C-213ENST00000399629 FBN2P35556 2912 aa5.57□□□□□ -1.52
CACNA1C-213ENST00000399629 NIPBLQ6KC79 2804 aaeCLIP5.55□□□□□ -1.52
CACNA1C-213ENST00000399629 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
CACNA1C-213ENST00000399629 ZANQ9Y493 2812 aa5.52□□□□□ -1.53
CACNA1C-213ENST00000399629 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
CACNA1C-213ENST00000399629 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CACNA1C-213ENST00000399629 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
CACNA1C-213ENST00000399629 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.55
CACNA1C-213ENST00000399629 TENM3Q9P273 2699 aa5.39□□□□□ -1.55
CACNA1C-213ENST00000399629 TRRAPQ9Y4A5 3859 aa5.38□□□□□ -1.55
CACNA1C-213ENST00000399629 NF1P21359 2839 aa5.38□□□□□ -1.55
CACNA1C-213ENST00000399629 TGP01266 2768 aa5.36□□□□□ -1.55
CACNA1C-213ENST00000399629 ALMS1Q8TCU4 4167 aa5.35□□□□□ -1.55
CACNA1C-213ENST00000399629 MXRA5Q9NR99 2828 aa5.35□□□□□ -1.55
CACNA1C-213ENST00000399629 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-213ENST00000399629 AKAP9Q99996 3911 aa5.34□□□□□ -1.55
CACNA1C-213ENST00000399629 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
CACNA1C-213ENST00000399629 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
CACNA1C-213ENST00000399629 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
CACNA1C-213ENST00000399629 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
CACNA1C-213ENST00000399629 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
CACNA1C-213ENST00000399629 KRTAP10-4P60372 401 aaPredicted RBP5.19□□□□□ -1.58
CACNA1C-213ENST00000399629 PKD1L1Q8TDX9 2849 aa5.19□□□□□ -1.58
CACNA1C-213ENST00000399629 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
CACNA1C-213ENST00000399629 PDZD2O15018 2839 aa5.16□□□□□ -1.58
CACNA1C-213ENST00000399629 INE1O15225 51 aa5.16□□□□□ -1.58
CACNA1C-213ENST00000399629 VWFP04275 2813 aa5.15□□□□□ -1.58
CACNA1C-213ENST00000399629 FBN1P35555 2871 aaKnown RBP5.15□□□□□ -1.59
CACNA1C-213ENST00000399629 KRTAP3-3Q9BYR6 98 aa5.14□□□□□ -1.59
CACNA1C-213ENST00000399629 HUWE1Q7Z6Z7 4374 aaKnown RBP5.14□□□□□ -1.59
CACNA1C-213ENST00000399629 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
CACNA1C-213ENST00000399629 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms