RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 MAP1AP78559 2803 aaPredicted RBP6.17□□□□□ -1.42
CACNA1C-210ENST00000399606 FLNAP21333 2647 aaKnown RBP6.16□□□□□ -1.42
CACNA1C-210ENST00000399606 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
CACNA1C-210ENST00000399606 CENPEQ02224 2701 aa6.16□□□□□ -1.42
CACNA1C-210ENST00000399606 SMG1Q96Q15 3661 aaKnown RBP6.15□□□□□ -1.43
CACNA1C-210ENST00000399606 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
CACNA1C-210ENST00000399606 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
CACNA1C-210ENST00000399606 CRYBG3Q68DQ2 2970 aa6.12□□□□□ -1.43
CACNA1C-210ENST00000399606 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
CACNA1C-210ENST00000399606 BAHCC1Q9P281 2608 aa6.11□□□□□ -1.43
CACNA1C-210ENST00000399606 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
CACNA1C-210ENST00000399606 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
CACNA1C-210ENST00000399606 SVEP1Q4LDE5 3571 aa6.08□□□□□ -1.44
CACNA1C-210ENST00000399606 SPENQ96T58 3664 aaKnown RBP6.08□□□□□ -1.44
CACNA1C-210ENST00000399606 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
CACNA1C-210ENST00000399606 NBEAQ8NFP9 2946 aa6.07□□□□□ -1.44
CACNA1C-210ENST00000399606 Q6ZRN7 208 aaPredicted RBP6.06□□□□□ -1.44
CACNA1C-210ENST00000399606 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
CACNA1C-210ENST00000399606 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
CACNA1C-210ENST00000399606 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
CACNA1C-210ENST00000399606 KRTAP11-1Q8IUC1 163 aa6.01□□□□□ -1.45
CACNA1C-210ENST00000399606 ASH1LQ9NR48 2969 aaKnown RBP6.01□□□□□ -1.45
CACNA1C-210ENST00000399606 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
CACNA1C-210ENST00000399606 TEP1Q99973 2627 aaKnown RBP5.97□□□□□ -1.45
CACNA1C-210ENST00000399606 TACC2O95359 2948 aa5.97□□□□□ -1.45
CACNA1C-210ENST00000399606 TEX15Q9BXT5 2789 aa5.96□□□□□ -1.45
CACNA1C-210ENST00000399606 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
CACNA1C-210ENST00000399606 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
CACNA1C-210ENST00000399606 CUBNO60494 3623 aa5.94□□□□□ -1.46
CACNA1C-210ENST00000399606 ZZEF1O43149 2961 aa5.93□□□□□ -1.46
CACNA1C-210ENST00000399606 XP32Q5T750 250 aa5.92□□□□□ -1.46
CACNA1C-210ENST00000399606 GCN1Q92616 2671 aaKnown RBP5.92□□□□□ -1.46
CACNA1C-210ENST00000399606 UNC79Q9P2D8 2635 aa5.92□□□□□ -1.46
CACNA1C-210ENST00000399606 UTP20O75691 2785 aaKnown RBP5.9□□□□□ -1.47
CACNA1C-210ENST00000399606 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
CACNA1C-210ENST00000399606 IGSF10Q6WRI0 2623 aa5.87□□□□□ -1.47
CACNA1C-210ENST00000399606 NBEAL2Q6ZNJ1 2754 aa5.87□□□□□ -1.47
CACNA1C-210ENST00000399606 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
CACNA1C-210ENST00000399606 NBEAL1Q6ZS30 2694 aa5.86□□□□□ -1.47
CACNA1C-210ENST00000399606 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
CACNA1C-210ENST00000399606 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
CACNA1C-210ENST00000399606 CSMD2Q7Z408 3487 aa5.82□□□□□ -1.48
CACNA1C-210ENST00000399606 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
CACNA1C-210ENST00000399606 STAB2Q8WWQ8 2551 aa5.78□□□□□ -1.48
CACNA1C-210ENST00000399606 COL6A5A8TX70 2615 aa5.76□□□□□ -1.49
CACNA1C-210ENST00000399606 VPS13CQ709C8 3753 aa5.75□□□□□ -1.49
CACNA1C-210ENST00000399606 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
CACNA1C-210ENST00000399606 FLNCQ14315 2725 aa5.75□□□□□ -1.49
CACNA1C-210ENST00000399606 ITPR1Q14643 2758 aa5.71□□□□□ -1.49
CACNA1C-210ENST00000399606 ITPR2Q14571 2701 aa5.7□□□□□ -1.5
CACNA1C-210ENST00000399606 H0YAA0 97 aa5.68□□□□□ -1.5
CACNA1C-210ENST00000399606 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
CACNA1C-210ENST00000399606 HIVEP1P15822 2718 aa5.67□□□□□ -1.5
CACNA1C-210ENST00000399606 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
CACNA1C-210ENST00000399606 CELSR2Q9HCU4 2923 aa5.67□□□□□ -1.5
CACNA1C-210ENST00000399606 CELSR1Q9NYQ6 3014 aa5.65□□□□□ -1.5
CACNA1C-210ENST00000399606 KMT2BQ9UMN6 2715 aaPredicted RBP5.64□□□□□ -1.51
CACNA1C-210ENST00000399606 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
CACNA1C-210ENST00000399606 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
CACNA1C-210ENST00000399606 UBR5O95071 2799 aaPredicted RBP5.62□□□□□ -1.51
CACNA1C-210ENST00000399606 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
CACNA1C-210ENST00000399606 FBN2P35556 2912 aa5.57□□□□□ -1.52
CACNA1C-210ENST00000399606 APCP25054 2843 aa5.57□□□□□ -1.52
CACNA1C-210ENST00000399606 NIPBLQ6KC79 2804 aaeCLIP5.55□□□□□ -1.52
CACNA1C-210ENST00000399606 ZANQ9Y493 2812 aa5.52□□□□□ -1.53
CACNA1C-210ENST00000399606 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
CACNA1C-210ENST00000399606 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.55
CACNA1C-210ENST00000399606 TRRAPQ9Y4A5 3859 aa5.38□□□□□ -1.55
CACNA1C-210ENST00000399606 TENM4Q6N022 2769 aa5.37□□□□□ -1.55
CACNA1C-210ENST00000399606 KRTAP13-4Q3LI77 160 aa5.35□□□□□ -1.55
CACNA1C-210ENST00000399606 MXRA5Q9NR99 2828 aa5.35□□□□□ -1.55
CACNA1C-210ENST00000399606 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-210ENST00000399606 AKAP9Q99996 3911 aa5.34□□□□□ -1.55
CACNA1C-210ENST00000399606 NF1P21359 2839 aa5.34□□□□□ -1.55
CACNA1C-210ENST00000399606 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
CACNA1C-210ENST00000399606 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
CACNA1C-210ENST00000399606 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
CACNA1C-210ENST00000399606 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CACNA1C-210ENST00000399606 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
CACNA1C-210ENST00000399606 TENM3Q9P273 2699 aa5.19□□□□□ -1.58
CACNA1C-210ENST00000399606 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CACNA1C-210ENST00000399606 INE1O15225 51 aa5.17□□□□□ -1.58
CACNA1C-210ENST00000399606 PKD1L1Q8TDX9 2849 aa5.16□□□□□ -1.58
CACNA1C-210ENST00000399606 VWFP04275 2813 aa5.15□□□□□ -1.58
CACNA1C-210ENST00000399606 FBN1P35555 2871 aaKnown RBP5.15□□□□□ -1.59
CACNA1C-210ENST00000399606 PDZD2O15018 2839 aa5.14□□□□□ -1.59
CACNA1C-210ENST00000399606 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
CACNA1C-210ENST00000399606 TGP01266 2768 aa5.12□□□□□ -1.59
CACNA1C-210ENST00000399606 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
CACNA1C-210ENST00000399606 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
CACNA1C-210ENST00000399606 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
CACNA1C-210ENST00000399606 OTOGQ6ZRI0 2925 aa5.03□□□□□ -1.6
CACNA1C-210ENST00000399606 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
CACNA1C-210ENST00000399606 SRRM2Q9UQ35 2752 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-210ENST00000399606 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-210ENST00000399606 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
CACNA1C-210ENST00000399606 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
CACNA1C-210ENST00000399606 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
CACNA1C-210ENST00000399606 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
CACNA1C-210ENST00000399606 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms