RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MXRA5Q9NR99 2828 aa8.32□□□□□ -1.08
PCDHGA11-201ENST00000398587 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
PCDHGA11-201ENST00000398587 OXTP01178 125 aa8.3□□□□□ -1.08
PCDHGA11-201ENST00000398587 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
PCDHGA11-201ENST00000398587 LCA10Q71F78 164 aa8.3□□□□□ -1.08
PCDHGA11-201ENST00000398587 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
PCDHGA11-201ENST00000398587 Q5VV11 94 aa8.28□□□□□ -1.08
PCDHGA11-201ENST00000398587 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
PCDHGA11-201ENST00000398587 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
PCDHGA11-201ENST00000398587 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
PCDHGA11-201ENST00000398587 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
PCDHGA11-201ENST00000398587 S4R3F8 94 aa8.21□□□□□ -1.1
PCDHGA11-201ENST00000398587 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
PCDHGA11-201ENST00000398587 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
PCDHGA11-201ENST00000398587 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
PCDHGA11-201ENST00000398587 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
PCDHGA11-201ENST00000398587 RELNP78509 3460 aa8.12□□□□□ -1.11
PCDHGA11-201ENST00000398587 DCHS1Q96JQ0 3298 aa8.1□□□□□ -1.11
PCDHGA11-201ENST00000398587 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
PCDHGA11-201ENST00000398587 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
PCDHGA11-201ENST00000398587 CELSR1Q9NYQ6 3014 aa8.08□□□□□ -1.12
PCDHGA11-201ENST00000398587 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
PCDHGA11-201ENST00000398587 M0R2T5 61 aa8.04□□□□□ -1.12
PCDHGA11-201ENST00000398587 TENM1Q9UKZ4 2725 aa8.03□□□□□ -1.12
PCDHGA11-201ENST00000398587 R4GN34 69 aa8.02□□□□□ -1.13
PCDHGA11-201ENST00000398587 LAMA5O15230 3695 aa8□□□□□ -1.13
PCDHGA11-201ENST00000398587 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
PCDHGA11-201ENST00000398587 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
PCDHGA11-201ENST00000398587 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
PCDHGA11-201ENST00000398587 PDZD2O15018 2839 aa7.98□□□□□ -1.13
PCDHGA11-201ENST00000398587 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
PCDHGA11-201ENST00000398587 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.15
PCDHGA11-201ENST00000398587 TENM2Q9NT68 2774 aa7.88□□□□□ -1.15
PCDHGA11-201ENST00000398587 M0QZ58 72 aa7.88□□□□□ -1.15
PCDHGA11-201ENST00000398587 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
PCDHGA11-201ENST00000398587 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
PCDHGA11-201ENST00000398587 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
PCDHGA11-201ENST00000398587 A8MUU9 505 aa7.85□□□□□ -1.15
PCDHGA11-201ENST00000398587 SPENQ96T58 3664 aaKnown RBP7.85□□□□□ -1.15
PCDHGA11-201ENST00000398587 ROMO1P60602 79 aa7.84□□□□□ -1.15
PCDHGA11-201ENST00000398587 SMG1Q96Q15 3661 aaKnown RBP7.83□□□□□ -1.16
PCDHGA11-201ENST00000398587 C20orf166-AS1Q96NR2 134 aa7.82□□□□□ -1.16
PCDHGA11-201ENST00000398587 VWFP04275 2813 aa7.82□□□□□ -1.16
PCDHGA11-201ENST00000398587 LUZP6Q538Z0 58 aa7.82□□□□□ -1.16
PCDHGA11-201ENST00000398587 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
PCDHGA11-201ENST00000398587 TGP01266 2768 aa7.8□□□□□ -1.16
PCDHGA11-201ENST00000398587 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
PCDHGA11-201ENST00000398587 A6NN06 94 aa7.7□□□□□ -1.18
PCDHGA11-201ENST00000398587 A8MU10 97 aa7.68□□□□□ -1.18
PCDHGA11-201ENST00000398587 BSNQ9UPA5 3926 aa7.65□□□□□ -1.18
PCDHGA11-201ENST00000398587 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
PCDHGA11-201ENST00000398587 XP32Q5T750 250 aa7.61□□□□□ -1.19
PCDHGA11-201ENST00000398587 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
PCDHGA11-201ENST00000398587 CSMD1Q96PZ7 3565 aa7.59□□□□□ -1.19
PCDHGA11-201ENST00000398587 NBPF19A0A087WUL8 3843 aa7.59□□□□□ -1.19
PCDHGA11-201ENST00000398587 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
PCDHGA11-201ENST00000398587 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
PCDHGA11-201ENST00000398587 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
PCDHGA11-201ENST00000398587 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
PCDHGA11-201ENST00000398587 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
PCDHGA11-201ENST00000398587 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
PCDHGA11-201ENST00000398587 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
PCDHGA11-201ENST00000398587 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
PCDHGA11-201ENST00000398587 FBN3Q75N90 2809 aa7.38□□□□□ -1.23
PCDHGA11-201ENST00000398587 SRRM2Q9UQ35 2752 aaKnown RBP7.38□□□□□ -1.23
PCDHGA11-201ENST00000398587 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
PCDHGA11-201ENST00000398587 H3BS24 57 aa7.35□□□□□ -1.23
PCDHGA11-201ENST00000398587 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
PCDHGA11-201ENST00000398587 H0YAA0 97 aa7.34□□□□□ -1.23
PCDHGA11-201ENST00000398587 TNP1P09430 55 aa7.28□□□□□ -1.24
PCDHGA11-201ENST00000398587 VPS13CQ709C8 3753 aa7.27□□□□□ -1.25
PCDHGA11-201ENST00000398587 TRRAPQ9Y4A5 3859 aa7.27□□□□□ -1.25
PCDHGA11-201ENST00000398587 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
PCDHGA11-201ENST00000398587 CUBNO60494 3623 aa7.26□□□□□ -1.25
PCDHGA11-201ENST00000398587 P0C880 135 aa7.22□□□□□ -1.25
PCDHGA11-201ENST00000398587 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
PCDHGA11-201ENST00000398587 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
PCDHGA11-201ENST00000398587 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
PCDHGA11-201ENST00000398587 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
PCDHGA11-201ENST00000398587 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
PCDHGA11-201ENST00000398587 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
PCDHGA11-201ENST00000398587 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
PCDHGA11-201ENST00000398587 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PCDHGA11-201ENST00000398587 HUWE1Q7Z6Z7 4374 aaKnown RBP6.89□□□□□ -1.31
PCDHGA11-201ENST00000398587 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
PCDHGA11-201ENST00000398587 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
PCDHGA11-201ENST00000398587 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
PCDHGA11-201ENST00000398587 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
PCDHGA11-201ENST00000398587 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
PCDHGA11-201ENST00000398587 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
PCDHGA11-201ENST00000398587 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
PCDHGA11-201ENST00000398587 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.35
PCDHGA11-201ENST00000398587 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
PCDHGA11-201ENST00000398587 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
PCDHGA11-201ENST00000398587 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
PCDHGA11-201ENST00000398587 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
PCDHGA11-201ENST00000398587 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
PCDHGA11-201ENST00000398587 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
PCDHGA11-201ENST00000398587 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
PCDHGA11-201ENST00000398587 DNHD1Q96M86 4753 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms