RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 NDUFB1O75438 58 aa12.96□□□□□ -0.34
TSPAN4-203ENST00000397397 IGHV6-1A0A0B4J1U7 121 aa12.95□□□□□ -0.34
TSPAN4-203ENST00000397397 A0A1B0GVX0 72 aa12.95□□□□□ -0.34
TSPAN4-203ENST00000397397 A8MWP4 228 aa12.95□□□□□ -0.34
TSPAN4-203ENST00000397397 DSCR10P59022 87 aa12.93□□□□□ -0.34
TSPAN4-203ENST00000397397 IGKV3D-7A0A0C4DH55 119 aa12.91□□□□□ -0.34
TSPAN4-203ENST00000397397 LINC00313P59037 77 aa12.89□□□□□ -0.35
TSPAN4-203ENST00000397397 XP32Q5T750 250 aa12.89□□□□□ -0.35
TSPAN4-203ENST00000397397 C8orf87E5RJ46 101 aa12.87□□□□□ -0.35
TSPAN4-203ENST00000397397 NOTCH2NLQ7Z3S9 236 aa12.87□□□□□ -0.35
TSPAN4-203ENST00000397397 PRR15Q8IV56 129 aa12.87□□□□□ -0.35
TSPAN4-203ENST00000397397 K7EQZ3 153 aa12.86□□□□□ -0.35
TSPAN4-203ENST00000397397 Q8N9L7 120 aa12.82□□□□□ -0.36
TSPAN4-203ENST00000397397 K7ERU9 68 aa12.81□□□□□ -0.36
TSPAN4-203ENST00000397397 CXCL6P80162 114 aa12.81□□□□□ -0.36
TSPAN4-203ENST00000397397 C8orf17Q9NRJ1 99 aa12.81□□□□□ -0.36
TSPAN4-203ENST00000397397 RNF213Q63HN8 5207 aa12.81□□□□□ -0.36
TSPAN4-203ENST00000397397 KRTAP16-1A8MUX0 517 aa12.77□□□□□ -0.37
TSPAN4-203ENST00000397397 LINC00643Q86TS7 51 aa12.77□□□□□ -0.37
TSPAN4-203ENST00000397397 ATP5EP2Q5VTU8 51 aa12.76□□□□□ -0.37
TSPAN4-203ENST00000397397 MMP24-AS1A0A0U1RRL7 71 aa12.74□□□□□ -0.37
TSPAN4-203ENST00000397397 RPL37P61927 97 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-203ENST00000397397 Q75L30 129 aa12.71□□□□□ -0.38
TSPAN4-203ENST00000397397 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.38
TSPAN4-203ENST00000397397 MUC17Q685J3 4493 aa12.7□□□□□ -0.38
TSPAN4-203ENST00000397397 A8MUU9 505 aa12.69□□□□□ -0.38
TSPAN4-203ENST00000397397 hDV103S1A0JD37 113 aa12.68□□□□□ -0.38
TSPAN4-203ENST00000397397 SEC61BP60468 96 aaKnown RBP12.68□□□□□ -0.38
TSPAN4-203ENST00000397397 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
TSPAN4-203ENST00000397397 TMEM254Q8TBM7 123 aa12.66□□□□□ -0.38
TSPAN4-203ENST00000397397 CASC2Q6XLA1 102 aa12.63□□□□□ -0.39
TSPAN4-203ENST00000397397 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-203ENST00000397397 HCG22E2RYF7 251 aa12.62□□□□□ -0.39
TSPAN4-203ENST00000397397 HIST1H4AP62805 103 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-203ENST00000397397 PCOTHQ58A44 107 aa12.61□□□□□ -0.39
TSPAN4-203ENST00000397397 Q8N9P0 234 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-203ENST00000397397 ATP11AUNQ6ZP68 121 aa12.59□□□□□ -0.39
TSPAN4-203ENST00000397397 NDUFS5O43920 106 aa12.54□□□□□ -0.4
TSPAN4-203ENST00000397397 A0A087WVE0 104 aa12.51□□□□□ -0.41
TSPAN4-203ENST00000397397 MUC2Q02817 5179 aa12.48□□□□□ -0.41
TSPAN4-203ENST00000397397 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
TSPAN4-203ENST00000397397 ZCCHC13Q8WW36 166 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-203ENST00000397397 KRTAP4-1Q9BYQ7 146 aa12.42□□□□□ -0.42
TSPAN4-203ENST00000397397 IMUPQ9GZP8 106 aa12.39□□□□□ -0.43
TSPAN4-203ENST00000397397 TP53AIP1Q9HCN2 124 aa12.34□□□□□ -0.43
TSPAN4-203ENST00000397397 Q5W150 140 aa12.32□□□□□ -0.44
TSPAN4-203ENST00000397397 A0A0U1RQV1 116 aa12.23□□□□□ -0.45
TSPAN4-203ENST00000397397 FAT4Q6V0I7 4981 aa12.23□□□□□ -0.45
TSPAN4-203ENST00000397397 SCGB1A1P11684 91 aa12.22□□□□□ -0.45
TSPAN4-203ENST00000397397 UQCRQO14949 82 aa12.2□□□□□ -0.46
TSPAN4-203ENST00000397397 SPINK7P58062 85 aa12.2□□□□□ -0.46
TSPAN4-203ENST00000397397 FAM236AA0A1B0GUQ0 79 aa12.2□□□□□ -0.46
TSPAN4-203ENST00000397397 FAM236BA0A1B0GV22 79 aa12.2□□□□□ -0.46
TSPAN4-203ENST00000397397 OCR1Q9BZK8 76 aa12.17□□□□□ -0.46
TSPAN4-203ENST00000397397 IGKV2D-30A0A075B6S6 120 aa12.16□□□□□ -0.46
TSPAN4-203ENST00000397397 IGKV2-30P06310 120 aa12.16□□□□□ -0.46
TSPAN4-203ENST00000397397 TRAV22A0A0B4J277 110 aa12.15□□□□□ -0.46
TSPAN4-203ENST00000397397 C7orf65Q6ZTY9 151 aa12.12□□□□□ -0.47
TSPAN4-203ENST00000397397 H0Y9P7 68 aa12.1□□□□□ -0.47
TSPAN4-203ENST00000397397 HRES1P13985 223 aa12.1□□□□□ -0.47
TSPAN4-203ENST00000397397 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-203ENST00000397397 ATOX1O00244 68 aa12.04□□□□□ -0.48
TSPAN4-203ENST00000397397 SMIM20Q8N5G0 67 aa12.03□□□□□ -0.48
TSPAN4-203ENST00000397397 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
TSPAN4-203ENST00000397397 LOC101927531A0A1B0GV80 90 aa12.01□□□□□ -0.49
TSPAN4-203ENST00000397397 MP68P56378 58 aa12.01□□□□□ -0.49
TSPAN4-203ENST00000397397 KRTAP19-2Q3LHN2 52 aa12.01□□□□□ -0.49
TSPAN4-203ENST00000397397 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
TSPAN4-203ENST00000397397 MPLKIPQ8TAP9 179 aa12□□□□□ -0.49
TSPAN4-203ENST00000397397 RBM12B-AS1Q9P1G2 102 aa12□□□□□ -0.49
TSPAN4-203ENST00000397397 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
TSPAN4-203ENST00000397397 LINC00208Q96KT6 92 aa11.97□□□□□ -0.49
TSPAN4-203ENST00000397397 C1orf64Q8NEQ6 169 aa11.96□□□□□ -0.49
TSPAN4-203ENST00000397397 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.49
TSPAN4-203ENST00000397397 FAM236DA0A1B0GTK5 79 aa11.94□□□□□ -0.5
TSPAN4-203ENST00000397397 FAM236CP0DP71 79 aa11.94□□□□□ -0.5
TSPAN4-203ENST00000397397 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
TSPAN4-203ENST00000397397 H3BPC8 53 aa11.91□□□□□ -0.5
TSPAN4-203ENST00000397397 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
TSPAN4-203ENST00000397397 SERP2Q8N6R1 65 aa11.86□□□□□ -0.51
TSPAN4-203ENST00000397397 KLKP1Q107X0 134 aa11.79□□□□□ -0.52
TSPAN4-203ENST00000397397 FLGP20930 4061 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-203ENST00000397397 MT1HP80294 61 aa11.74□□□□□ -0.53
TSPAN4-203ENST00000397397 C20orf197Q8N268 126 aa11.7□□□□□ -0.54
TSPAN4-203ENST00000397397 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
TSPAN4-203ENST00000397397 COX7CP15954 63 aa11.69□□□□□ -0.54
TSPAN4-203ENST00000397397 H1FX-AS1Q4G0G2 97 aa11.69□□□□□ -0.54
TSPAN4-203ENST00000397397 ANAPC13Q9BS18 74 aa11.69□□□□□ -0.54
TSPAN4-203ENST00000397397 KRTAP3-1Q9BYR8 98 aa11.68□□□□□ -0.54
TSPAN4-203ENST00000397397 KRTAP9-2Q9BYQ4 174 aa11.67□□□□□ -0.54
TSPAN4-203ENST00000397397 M0R2T5 61 aa11.63□□□□□ -0.55
TSPAN4-203ENST00000397397 A8MUN3 132 aa11.52□□□□□ -0.56
TSPAN4-203ENST00000397397 S4R3F8 94 aa11.49□□□□□ -0.57
TSPAN4-203ENST00000397397 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
TSPAN4-203ENST00000397397 CCDC179H3BU77 68 aa11.43□□□□□ -0.58
TSPAN4-203ENST00000397397 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-203ENST00000397397 NDUFC1O43677 76 aa11.41□□□□□ -0.58
TSPAN4-203ENST00000397397 LORP23490 312 aaPredicted RBP11.41□□□□□ -0.58
TSPAN4-203ENST00000397397 LCA10Q71F78 164 aa11.41□□□□□ -0.58
TSPAN4-203ENST00000397397 CYSTM1Q9H1C7 97 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms