RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
SEC13-206ENST00000397102 TRACP01848 142 aa6.92□□□□□ -1.3
SEC13-206ENST00000397102 CCKP06307 115 aa6.91□□□□□ -1.3
SEC13-206ENST00000397102 A0A0B4J2C4 111 aa6.9□□□□□ -1.3
SEC13-206ENST00000397102 A0A1B0GV72 72 aa6.9□□□□□ -1.3
SEC13-206ENST00000397102 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
SEC13-206ENST00000397102 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
SEC13-206ENST00000397102 H3BQ85 93 aa6.85□□□□□ -1.31
SEC13-206ENST00000397102 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
SEC13-206ENST00000397102 LYRM7Q5U5X0 104 aa6.84□□□□□ -1.31
SEC13-206ENST00000397102 J3KT08 172 aa6.83□□□□□ -1.32
SEC13-206ENST00000397102 DNAL4O96015 105 aa6.83□□□□□ -1.32
SEC13-206ENST00000397102 MT1BP07438 61 aa6.83□□□□□ -1.32
SEC13-206ENST00000397102 COX8AP10176 69 aa6.83□□□□□ -1.32
SEC13-206ENST00000397102 KMT2DO14686 5537 aa6.82□□□□□ -1.32
SEC13-206ENST00000397102 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
SEC13-206ENST00000397102 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
SEC13-206ENST00000397102 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
SEC13-206ENST00000397102 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
SEC13-206ENST00000397102 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
SEC13-206ENST00000397102 DLEU1O43261 78 aa6.8□□□□□ -1.32
SEC13-206ENST00000397102 Q5VV11 94 aa6.8□□□□□ -1.32
SEC13-206ENST00000397102 HIST1H2BLQ99880 126 aa6.8□□□□□ -1.32
SEC13-206ENST00000397102 VPS25Q9BRG1 176 aa6.8□□□□□ -1.32
SEC13-206ENST00000397102 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
SEC13-206ENST00000397102 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
SEC13-206ENST00000397102 TRIAP1O43715 76 aa6.79□□□□□ -1.32
SEC13-206ENST00000397102 NDUFB1O75438 58 aa6.79□□□□□ -1.32
SEC13-206ENST00000397102 KRTAP10-5P60370 271 aa6.79□□□□□ -1.32
SEC13-206ENST00000397102 HIST3H2BBQ8N257 126 aa6.78□□□□□ -1.32
SEC13-206ENST00000397102 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
SEC13-206ENST00000397102 S100A2P29034 98 aa6.77□□□□□ -1.33
SEC13-206ENST00000397102 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
SEC13-206ENST00000397102 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
SEC13-206ENST00000397102 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
SEC13-206ENST00000397102 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
SEC13-206ENST00000397102 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
SEC13-206ENST00000397102 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
SEC13-206ENST00000397102 A6NJY4 79 aa6.72□□□□□ -1.33
SEC13-206ENST00000397102 CEND1Q8N111 149 aa6.72□□□□□ -1.33
SEC13-206ENST00000397102 KRTAP4-2Q9BYR5 136 aa6.72□□□□□ -1.33
SEC13-206ENST00000397102 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
SEC13-206ENST00000397102 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
SEC13-206ENST00000397102 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.34
SEC13-206ENST00000397102 Q6ZVQ6 151 aa6.71□□□□□ -1.34
SEC13-206ENST00000397102 C14orf144Q96I85 54 aa6.71□□□□□ -1.34
SEC13-206ENST00000397102 Q6ZQT0 140 aa6.7□□□□□ -1.34
SEC13-206ENST00000397102 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
SEC13-206ENST00000397102 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
SEC13-206ENST00000397102 PSMB2P49721 201 aa6.67□□□□□ -1.34
SEC13-206ENST00000397102 FXYD2P54710 66 aa6.67□□□□□ -1.34
SEC13-206ENST00000397102 COX6CP09669 75 aa6.66□□□□□ -1.34
SEC13-206ENST00000397102 C9JAW5 83 aa6.65□□□□□ -1.34
SEC13-206ENST00000397102 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
SEC13-206ENST00000397102 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
SEC13-206ENST00000397102 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
SEC13-206ENST00000397102 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
SEC13-206ENST00000397102 IGKV2-30P06310 120 aa6.62□□□□□ -1.35
SEC13-206ENST00000397102 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
SEC13-206ENST00000397102 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
SEC13-206ENST00000397102 PRR15Q8IV56 129 aa6.61□□□□□ -1.35
SEC13-206ENST00000397102 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
SEC13-206ENST00000397102 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
SEC13-206ENST00000397102 SPRR2EP22531 72 aa6.59□□□□□ -1.35
SEC13-206ENST00000397102 SPRR2BP35325 72 aa6.59□□□□□ -1.35
SEC13-206ENST00000397102 SPRR2AP35326 72 aa6.59□□□□□ -1.35
SEC13-206ENST00000397102 K7ERJ3 54 aa6.58□□□□□ -1.36
SEC13-206ENST00000397102 S100A6P06703 90 aa6.58□□□□□ -1.36
SEC13-206ENST00000397102 A0A1B0GW54 56 aa6.57□□□□□ -1.36
SEC13-206ENST00000397102 NDUFS5O43920 106 aa6.57□□□□□ -1.36
SEC13-206ENST00000397102 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
SEC13-206ENST00000397102 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
SEC13-206ENST00000397102 KRTAP2-2Q9BYT5 123 aa6.56□□□□□ -1.36
SEC13-206ENST00000397102 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
SEC13-206ENST00000397102 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
SEC13-206ENST00000397102 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
SEC13-206ENST00000397102 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
SEC13-206ENST00000397102 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
SEC13-206ENST00000397102 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
SEC13-206ENST00000397102 Q5W150 140 aa6.53□□□□□ -1.36
SEC13-206ENST00000397102 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SEC13-206ENST00000397102 S4R3F8 94 aa6.51□□□□□ -1.37
SEC13-206ENST00000397102 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
SEC13-206ENST00000397102 HSD52Q0P140 79 aa6.5□□□□□ -1.37
SEC13-206ENST00000397102 SCGB1C2P0DMR2 95 aa6.49□□□□□ -1.37
SEC13-206ENST00000397102 JMJD7-PLA2G4BH0Y9G9 81 aa6.48□□□□□ -1.37
SEC13-206ENST00000397102 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
SEC13-206ENST00000397102 S100A1P23297 94 aa6.47□□□□□ -1.37
SEC13-206ENST00000397102 NREPQ16612 68 aa6.47□□□□□ -1.37
SEC13-206ENST00000397102 K7EQZ3 153 aa6.46□□□□□ -1.38
SEC13-206ENST00000397102 PDE6GP18545 87 aa6.46□□□□□ -1.38
SEC13-206ENST00000397102 LCA10Q71F78 164 aa6.46□□□□□ -1.38
SEC13-206ENST00000397102 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
SEC13-206ENST00000397102 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
SEC13-206ENST00000397102 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
SEC13-206ENST00000397102 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
SEC13-206ENST00000397102 HCG22E2RYF7 251 aa6.38□□□□□ -1.39
SEC13-206ENST00000397102 SPRR2DP22532 72 aa6.38□□□□□ -1.39
SEC13-206ENST00000397102 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
SEC13-206ENST00000397102 C1orf64Q8NEQ6 169 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms