RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 Q6ZVQ6 151 aa8.89□□□□□ -0.99
AP1S3-202ENST00000396653 DSCR10P59022 87 aa8.88□□□□□ -0.99
AP1S3-202ENST00000396653 LINC00313P59037 77 aa8.88□□□□□ -0.99
AP1S3-202ENST00000396653 RPL37P61927 97 aaKnown RBP8.88□□□□□ -0.99
AP1S3-202ENST00000396653 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
AP1S3-202ENST00000396653 LINC00846Q9NV44 126 aa8.88□□□□□ -0.99
AP1S3-202ENST00000396653 IGHV6-1A0A0B4J1U7 121 aa8.87□□□□□ -0.99
AP1S3-202ENST00000396653 Q75L30 129 aa8.85□□□□□ -0.99
AP1S3-202ENST00000396653 BPY2O14599 106 aa8.84□□□□□ -0.99
AP1S3-202ENST00000396653 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
AP1S3-202ENST00000396653 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
AP1S3-202ENST00000396653 FAM240AA0A1B0GVK7 77 aa8.83□□□□□ -1
AP1S3-202ENST00000396653 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
AP1S3-202ENST00000396653 ACYP1P07311 99 aa8.83□□□□□ -1
AP1S3-202ENST00000396653 A8MUU9 505 aa8.82□□□□□ -1
AP1S3-202ENST00000396653 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
AP1S3-202ENST00000396653 PRR15Q8IV56 129 aa8.82□□□□□ -1
AP1S3-202ENST00000396653 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
AP1S3-202ENST00000396653 K7EQZ3 153 aa8.78□□□□□ -1
AP1S3-202ENST00000396653 PCOTHQ58A44 107 aa8.78□□□□□ -1
AP1S3-202ENST00000396653 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
AP1S3-202ENST00000396653 MMP24-AS1A0A0U1RRL7 71 aa8.74□□□□□ -1.01
AP1S3-202ENST00000396653 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
AP1S3-202ENST00000396653 CXCL6P80162 114 aa8.73□□□□□ -1.01
AP1S3-202ENST00000396653 J3QR89 54 aa8.71□□□□□ -1.02
AP1S3-202ENST00000396653 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
AP1S3-202ENST00000396653 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.02
AP1S3-202ENST00000396653 Q8N9L7 120 aa8.7□□□□□ -1.02
AP1S3-202ENST00000396653 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
AP1S3-202ENST00000396653 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
AP1S3-202ENST00000396653 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
AP1S3-202ENST00000396653 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
AP1S3-202ENST00000396653 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
AP1S3-202ENST00000396653 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
AP1S3-202ENST00000396653 HCG22E2RYF7 251 aa8.62□□□□□ -1.03
AP1S3-202ENST00000396653 LINC00643Q86TS7 51 aa8.62□□□□□ -1.03
AP1S3-202ENST00000396653 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
AP1S3-202ENST00000396653 MUC2Q02817 5179 aa8.61□□□□□ -1.03
AP1S3-202ENST00000396653 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
AP1S3-202ENST00000396653 K7ERU9 68 aa8.55□□□□□ -1.04
AP1S3-202ENST00000396653 NDUFS5O43920 106 aa8.55□□□□□ -1.04
AP1S3-202ENST00000396653 HIST1H4AP62805 103 aaKnown RBP8.51□□□□□ -1.05
AP1S3-202ENST00000396653 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.06
AP1S3-202ENST00000396653 TP53AIP1Q9HCN2 124 aa8.46□□□□□ -1.06
AP1S3-202ENST00000396653 FAT4Q6V0I7 4981 aa8.44□□□□□ -1.06
AP1S3-202ENST00000396653 SPINK7P58062 85 aa8.43□□□□□ -1.06
AP1S3-202ENST00000396653 Q5W150 140 aa8.43□□□□□ -1.06
AP1S3-202ENST00000396653 A0A087WVE0 104 aa8.42□□□□□ -1.06
AP1S3-202ENST00000396653 HRES1P13985 223 aa8.41□□□□□ -1.06
AP1S3-202ENST00000396653 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
AP1S3-202ENST00000396653 MPLKIPQ8TAP9 179 aa8.39□□□□□ -1.07
AP1S3-202ENST00000396653 COX6B2Q6YFQ2 88 aa8.37□□□□□ -1.07
AP1S3-202ENST00000396653 IMUPQ9GZP8 106 aa8.37□□□□□ -1.07
AP1S3-202ENST00000396653 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
AP1S3-202ENST00000396653 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
AP1S3-202ENST00000396653 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
AP1S3-202ENST00000396653 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
AP1S3-202ENST00000396653 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
AP1S3-202ENST00000396653 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
AP1S3-202ENST00000396653 UQCRQO14949 82 aa8.32□□□□□ -1.08
AP1S3-202ENST00000396653 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
AP1S3-202ENST00000396653 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
AP1S3-202ENST00000396653 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
AP1S3-202ENST00000396653 MT1HP80294 61 aa8.28□□□□□ -1.08
AP1S3-202ENST00000396653 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
AP1S3-202ENST00000396653 FLGP20930 4061 aaPredicted RBP8.25□□□□□ -1.09
AP1S3-202ENST00000396653 ATOX1O00244 68 aa8.24□□□□□ -1.09
AP1S3-202ENST00000396653 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
AP1S3-202ENST00000396653 H0Y9P7 68 aa8.22□□□□□ -1.09
AP1S3-202ENST00000396653 SCGB1A1P11684 91 aa8.21□□□□□ -1.1
AP1S3-202ENST00000396653 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
AP1S3-202ENST00000396653 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
AP1S3-202ENST00000396653 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
AP1S3-202ENST00000396653 MP68P56378 58 aa8.16□□□□□ -1.1
AP1S3-202ENST00000396653 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
AP1S3-202ENST00000396653 SMIM20Q8N5G0 67 aa8.15□□□□□ -1.1
AP1S3-202ENST00000396653 H3BPC8 53 aa8.13□□□□□ -1.11
AP1S3-202ENST00000396653 M0R2T5 61 aa8.13□□□□□ -1.11
AP1S3-202ENST00000396653 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
AP1S3-202ENST00000396653 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
AP1S3-202ENST00000396653 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
AP1S3-202ENST00000396653 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
AP1S3-202ENST00000396653 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
AP1S3-202ENST00000396653 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
AP1S3-202ENST00000396653 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
AP1S3-202ENST00000396653 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
AP1S3-202ENST00000396653 KLKP1Q107X0 134 aa8□□□□□ -1.13
AP1S3-202ENST00000396653 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
AP1S3-202ENST00000396653 A8MUN3 132 aa7.94□□□□□ -1.14
AP1S3-202ENST00000396653 S4R3F8 94 aa7.92□□□□□ -1.14
AP1S3-202ENST00000396653 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
AP1S3-202ENST00000396653 LCA10Q71F78 164 aa7.86□□□□□ -1.15
AP1S3-202ENST00000396653 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
AP1S3-202ENST00000396653 SNURFQ9Y675 71 aa7.84□□□□□ -1.15
AP1S3-202ENST00000396653 COX7CP15954 63 aa7.83□□□□□ -1.16
AP1S3-202ENST00000396653 DMAC1Q96GE9 116 aa7.83□□□□□ -1.16
AP1S3-202ENST00000396653 MT2AP02795 61 aa7.82□□□□□ -1.16
AP1S3-202ENST00000396653 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
AP1S3-202ENST00000396653 LCE2DQ5TA82 110 aaPredicted RBP7.8□□□□□ -1.16
AP1S3-202ENST00000396653 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms