RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
PDE1C-203ENST00000396184 MKI67P46013 3256 aaKnown RBP3.72□□□□□ -1.81
PDE1C-203ENST00000396184 HIVEP1P15822 2718 aa3.71□□□□□ -1.82
PDE1C-203ENST00000396184 COL12A1Q99715 3063 aa3.71□□□□□ -1.82
PDE1C-203ENST00000396184 XIRP2A4UGR9 3374 aa3.71□□□□□ -1.82
PDE1C-203ENST00000396184 HTTP42858 3142 aa3.71□□□□□ -1.82
PDE1C-203ENST00000396184 Q6ZRN7 208 aaPredicted RBP3.69□□□□□ -1.82
PDE1C-203ENST00000396184 TACC2O95359 2948 aa3.66□□□□□ -1.82
PDE1C-203ENST00000396184 TGP01266 2768 aa3.65□□□□□ -1.83
PDE1C-203ENST00000396184 DNAH14Q0VDD8 3507 aa3.62□□□□□ -1.83
PDE1C-203ENST00000396184 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
PDE1C-203ENST00000396184 LAMA3Q16787 3333 aa3.59□□□□□ -1.83
PDE1C-203ENST00000396184 TNRC18O15417 2968 aaPredicted RBP3.58□□□□□ -1.84
PDE1C-203ENST00000396184 BRCA2P51587 3418 aa3.58□□□□□ -1.84
PDE1C-203ENST00000396184 LAMA1P25391 3075 aa3.57□□□□□ -1.84
PDE1C-203ENST00000396184 CRYBG3Q68DQ2 2970 aa3.57□□□□□ -1.84
PDE1C-203ENST00000396184 NF1P21359 2839 aa3.57□□□□□ -1.84
PDE1C-203ENST00000396184 BOD1L1Q8NFC6 3051 aa3.57□□□□□ -1.84
PDE1C-203ENST00000396184 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
PDE1C-203ENST00000396184 COL6A3P12111 3177 aa3.55□□□□□ -1.84
PDE1C-203ENST00000396184 SRRM2Q9UQ35 2752 aaKnown RBP3.55□□□□□ -1.84
PDE1C-203ENST00000396184 CFAP47Q6ZTR5 3102 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 DMXL1Q9Y485 3027 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 PDZD2O15018 2839 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 TENM3Q9P273 2699 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
PDE1C-203ENST00000396184 NIPBLQ6KC79 2804 aaeCLIP3.53□□□□□ -1.84
PDE1C-203ENST00000396184 ZZEF1O43149 2961 aa3.53□□□□□ -1.84
PDE1C-203ENST00000396184 ATMQ13315 3056 aa3.53□□□□□ -1.84
PDE1C-203ENST00000396184 VCANP13611 3396 aa3.52□□□□□ -1.85
PDE1C-203ENST00000396184 ZANQ9Y493 2812 aa3.52□□□□□ -1.85
PDE1C-203ENST00000396184 DCHS2Q6V1P9 2916 aa3.51□□□□□ -1.85
PDE1C-203ENST00000396184 XP32Q5T750 250 aa3.5□□□□□ -1.85
PDE1C-203ENST00000396184 CDH23Q9H251 3354 aa3.49□□□□□ -1.85
PDE1C-203ENST00000396184 A0A1B0GVY2 172 aa3.48□□□□□ -1.85
PDE1C-203ENST00000396184 TENM1Q9UKZ4 2725 aa3.48□□□□□ -1.85
PDE1C-203ENST00000396184 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
PDE1C-203ENST00000396184 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
PDE1C-203ENST00000396184 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
PDE1C-203ENST00000396184 MXRA5Q9NR99 2828 aa3.46□□□□□ -1.86
PDE1C-203ENST00000396184 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
PDE1C-203ENST00000396184 INE1O15225 51 aa3.45□□□□□ -1.86
PDE1C-203ENST00000396184 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
PDE1C-203ENST00000396184 FBN2P35556 2912 aa3.43□□□□□ -1.86
PDE1C-203ENST00000396184 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
PDE1C-203ENST00000396184 SZT2Q5T011 3432 aa3.42□□□□□ -1.86
PDE1C-203ENST00000396184 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
PDE1C-203ENST00000396184 USP34Q70CQ2 3546 aa3.41□□□□□ -1.86
PDE1C-203ENST00000396184 SPEGQ15772 3267 aa3.4□□□□□ -1.86
PDE1C-203ENST00000396184 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
PDE1C-203ENST00000396184 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
PDE1C-203ENST00000396184 SPTBN5Q9NRC6 3674 aaKnown RBP3.36□□□□□ -1.87
PDE1C-203ENST00000396184 TENM2Q9NT68 2774 aa3.35□□□□□ -1.87
PDE1C-203ENST00000396184 TENM4Q6N022 2769 aa3.35□□□□□ -1.87
PDE1C-203ENST00000396184 ZFHX3Q15911 3703 aa3.35□□□□□ -1.87
PDE1C-203ENST00000396184 VWFP04275 2813 aa3.32□□□□□ -1.88
PDE1C-203ENST00000396184 MYO15AQ9UKN7 3530 aa3.31□□□□□ -1.88
PDE1C-203ENST00000396184 PKD1L1Q8TDX9 2849 aa3.3□□□□□ -1.88
PDE1C-203ENST00000396184 KRTAP3-1Q9BYR8 98 aa3.28□□□□□ -1.88
PDE1C-203ENST00000396184 WDFY3Q8IZQ1 3526 aa3.28□□□□□ -1.88
PDE1C-203ENST00000396184 LOC400499M0QZD8 3231 aa3.27□□□□□ -1.89
PDE1C-203ENST00000396184 EYSQ5T1H1 3165 aa3.27□□□□□ -1.89
PDE1C-203ENST00000396184 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
PDE1C-203ENST00000396184 ZFHX4Q86UP3 3567 aa3.25□□□□□ -1.89
PDE1C-203ENST00000396184 DCHS1Q96JQ0 3298 aa3.22□□□□□ -1.89
PDE1C-203ENST00000396184 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
PDE1C-203ENST00000396184 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
PDE1C-203ENST00000396184 MEGF8Q7Z7M0 2845 aa3.2□□□□□ -1.9
PDE1C-203ENST00000396184 MUC3AQ02505 3323 aa3.19□□□□□ -1.9
PDE1C-203ENST00000396184 COL7A1Q02388 2944 aa3.16□□□□□ -1.9
PDE1C-203ENST00000396184 FBN1P35555 2871 aaKnown RBP3.16□□□□□ -1.9
PDE1C-203ENST00000396184 SPENQ96T58 3664 aaKnown RBP3.16□□□□□ -1.9
PDE1C-203ENST00000396184 DMDP11532 3685 aa3.15□□□□□ -1.9
PDE1C-203ENST00000396184 LAMA5O15230 3695 aa3.14□□□□□ -1.91
PDE1C-203ENST00000396184 SMG1Q96Q15 3661 aaKnown RBP3.14□□□□□ -1.91
PDE1C-203ENST00000396184 FBN3Q75N90 2809 aa3.14□□□□□ -1.91
PDE1C-203ENST00000396184 OTOGQ6ZRI0 2925 aa3.13□□□□□ -1.91
PDE1C-203ENST00000396184 RELNP78509 3460 aa3.12□□□□□ -1.91
PDE1C-203ENST00000396184 KRTAP3-2Q9BYR7 98 aa3.1□□□□□ -1.91
PDE1C-203ENST00000396184 CUBNO60494 3623 aa3.09□□□□□ -1.92
PDE1C-203ENST00000396184 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
PDE1C-203ENST00000396184 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
PDE1C-203ENST00000396184 KRTAP3-3Q9BYR6 98 aa3.05□□□□□ -1.92
PDE1C-203ENST00000396184 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
PDE1C-203ENST00000396184 SVEP1Q4LDE5 3571 aa3.01□□□□□ -1.93
PDE1C-203ENST00000396184 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
PDE1C-203ENST00000396184 NBPF19A0A087WUL8 3843 aa3.01□□□□□ -1.93
PDE1C-203ENST00000396184 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
PDE1C-203ENST00000396184 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
PDE1C-203ENST00000396184 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
PDE1C-203ENST00000396184 BSNQ9UPA5 3926 aa2.9□□□□□ -1.95
PDE1C-203ENST00000396184 CSMD3Q7Z407 3707 aa2.9□□□□□ -1.95
PDE1C-203ENST00000396184 TRRAPQ9Y4A5 3859 aa2.88□□□□□ -1.95
PDE1C-203ENST00000396184 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
PDE1C-203ENST00000396184 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
PDE1C-203ENST00000396184 VPS13CQ709C8 3753 aa2.86□□□□□ -1.95
PDE1C-203ENST00000396184 LORP23490 312 aaPredicted RBP2.83□□□□□ -1.96
PDE1C-203ENST00000396184 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
PDE1C-203ENST00000396184 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms