RNA–Protein interactions for RNA: ENST00000396128.8

KLHL28-202, Transcript of kelch like family member 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL28, Length 6,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-202ENST00000396128 HTTP42858 3142 aa2.87□□□□□ -1.95
KLHL28-202ENST00000396128 PRRC2CQ9Y520 2896 aaKnown RBP2.87□□□□□ -1.95
KLHL28-202ENST00000396128 SZT2Q5T011 3432 aa2.86□□□□□ -1.95
KLHL28-202ENST00000396128 NOTCH1P46531 2555 aa2.85□□□□□ -1.95
KLHL28-202ENST00000396128 REV3LO60673 3130 aa2.84□□□□□ -1.95
KLHL28-202ENST00000396128 EYSQ5T1H1 3165 aa2.84□□□□□ -1.95
KLHL28-202ENST00000396128 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
KLHL28-202ENST00000396128 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.96
KLHL28-202ENST00000396128 STAB2Q8WWQ8 2551 aa2.82□□□□□ -1.96
KLHL28-202ENST00000396128 HIVEP1P15822 2718 aa2.82□□□□□ -1.96
KLHL28-202ENST00000396128 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
KLHL28-202ENST00000396128 COL6A3P12111 3177 aa2.81□□□□□ -1.96
KLHL28-202ENST00000396128 LAMA1P25391 3075 aa2.81□□□□□ -1.96
KLHL28-202ENST00000396128 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
KLHL28-202ENST00000396128 SPTBN5Q9NRC6 3674 aaKnown RBP2.79□□□□□ -1.96
KLHL28-202ENST00000396128 TENM4Q6N022 2769 aa2.78□□□□□ -1.96
KLHL28-202ENST00000396128 MUC3AQ02505 3323 aa2.78□□□□□ -1.96
KLHL28-202ENST00000396128 NBEAL2Q6ZNJ1 2754 aa2.77□□□□□ -1.97
KLHL28-202ENST00000396128 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
KLHL28-202ENST00000396128 UBR5O95071 2799 aaPredicted RBP2.77□□□□□ -1.97
KLHL28-202ENST00000396128 ITPR1Q14643 2758 aa2.76□□□□□ -1.97
KLHL28-202ENST00000396128 DMDP11532 3685 aa2.75□□□□□ -1.97
KLHL28-202ENST00000396128 DSPP15924 2871 aaKnown RBP2.74□□□□□ -1.97
KLHL28-202ENST00000396128 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
KLHL28-202ENST00000396128 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
KLHL28-202ENST00000396128 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
KLHL28-202ENST00000396128 UTP20O75691 2785 aaKnown RBP2.73□□□□□ -1.97
KLHL28-202ENST00000396128 TRIOO75962 3097 aa2.72□□□□□ -1.97
KLHL28-202ENST00000396128 APCP25054 2843 aa2.72□□□□□ -1.97
KLHL28-202ENST00000396128 FRYLO94915 3013 aa2.71□□□□□ -1.97
KLHL28-202ENST00000396128 WDFY4Q6ZS81 3184 aa2.71□□□□□ -1.98
KLHL28-202ENST00000396128 LOC400499M0QZD8 3231 aa2.71□□□□□ -1.98
KLHL28-202ENST00000396128 SPENQ96T58 3664 aaKnown RBP2.7□□□□□ -1.98
KLHL28-202ENST00000396128 FRYQ5TBA9 3013 aa2.69□□□□□ -1.98
KLHL28-202ENST00000396128 ALMS1Q8TCU4 4167 aa2.69□□□□□ -1.98
KLHL28-202ENST00000396128 FREM2Q5SZK8 3169 aa2.69□□□□□ -1.98
KLHL28-202ENST00000396128 VPS13AQ96RL7 3174 aa2.68□□□□□ -1.98
KLHL28-202ENST00000396128 CSMD2Q7Z408 3487 aa2.68□□□□□ -1.98
KLHL28-202ENST00000396128 CELSR3Q9NYQ7 3312 aa2.68□□□□□ -1.98
KLHL28-202ENST00000396128 LRBAP50851 2863 aa2.67□□□□□ -1.98
KLHL28-202ENST00000396128 TENM2Q9NT68 2774 aa2.67□□□□□ -1.98
KLHL28-202ENST00000396128 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
KLHL28-202ENST00000396128 ASPMQ8IZT6 3477 aa2.66□□□□□ -1.98
KLHL28-202ENST00000396128 PRUNE2Q8WUY3 3088 aa2.66□□□□□ -1.98
KLHL28-202ENST00000396128 KRTAP23-1A1A580 65 aa2.65□□□□□ -1.99
KLHL28-202ENST00000396128 NIPBLQ6KC79 2804 aaeCLIP2.64□□□□□ -1.99
KLHL28-202ENST00000396128 CRYBG3Q68DQ2 2970 aa2.64□□□□□ -1.99
KLHL28-202ENST00000396128 KRTAP4-5Q9BYR2 181 aa2.64□□□□□ -1.99
KLHL28-202ENST00000396128 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
KLHL28-202ENST00000396128 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
KLHL28-202ENST00000396128 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
KLHL28-202ENST00000396128 INE1O15225 51 aa2.63□□□□□ -1.99
KLHL28-202ENST00000396128 NBPF19A0A087WUL8 3843 aa2.62□□□□□ -1.99
KLHL28-202ENST00000396128 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
KLHL28-202ENST00000396128 CFAP47Q6ZTR5 3102 aa2.61□□□□□ -1.99
KLHL28-202ENST00000396128 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
KLHL28-202ENST00000396128 FLNCQ14315 2725 aa2.6□□□□□ -1.99
KLHL28-202ENST00000396128 TNRC18O15417 2968 aaPredicted RBP2.59□□□□□ -2
KLHL28-202ENST00000396128 BOD1L1Q8NFC6 3051 aa2.58□□□□□ -2
KLHL28-202ENST00000396128 SMG1Q96Q15 3661 aaKnown RBP2.58□□□□□ -2
KLHL28-202ENST00000396128 RELNP78509 3460 aa2.58□□□□□ -2
KLHL28-202ENST00000396128 NBEAQ8NFP9 2946 aa2.57□□□□□ -2
KLHL28-202ENST00000396128 AKAP9Q99996 3911 aa2.57□□□□□ -2
KLHL28-202ENST00000396128 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
KLHL28-202ENST00000396128 TENM1Q9UKZ4 2725 aa2.56□□□□□ -2
KLHL28-202ENST00000396128 ATMQ13315 3056 aa2.56□□□□□ -2
KLHL28-202ENST00000396128 KRTAP3-2Q9BYR7 98 aa2.55□□□□□ -2
KLHL28-202ENST00000396128 COL12A1Q99715 3063 aa2.55□□□□□ -2
KLHL28-202ENST00000396128 LAMA5O15230 3695 aa2.53□□□□□ -2
KLHL28-202ENST00000396128 ANK3Q12955 4377 aaKnown RBP2.53□□□□□ -2
KLHL28-202ENST00000396128 TACC2O95359 2948 aa2.53□□□□□ -2
KLHL28-202ENST00000396128 LCE3AQ5TA76 89 aa2.53□□□□□ -2
KLHL28-202ENST00000396128 DMXL1Q9Y485 3027 aa2.52□□□□□ -2.01
KLHL28-202ENST00000396128 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
KLHL28-202ENST00000396128 TENM3Q9P273 2699 aa2.51□□□□□ -2.01
KLHL28-202ENST00000396128 PDZD2O15018 2839 aa2.51□□□□□ -2.01
KLHL28-202ENST00000396128 TGP01266 2768 aa2.51□□□□□ -2.01
KLHL28-202ENST00000396128 KALRNO60229 2985 aa2.5□□□□□ -2.01
KLHL28-202ENST00000396128 LORP23490 312 aaPredicted RBP2.5□□□□□ -2.01
KLHL28-202ENST00000396128 HRNRQ86YZ3 2850 aaPredicted RBP2.5□□□□□ -2.01
KLHL28-202ENST00000396128 DCHS2Q6V1P9 2916 aa2.48□□□□□ -2.01
KLHL28-202ENST00000396128 DMXL2Q8TDJ6 3036 aa2.48□□□□□ -2.01
KLHL28-202ENST00000396128 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
KLHL28-202ENST00000396128 NF1P21359 2839 aa2.48□□□□□ -2.01
KLHL28-202ENST00000396128 MT1HP80294 61 aa2.47□□□□□ -2.01
KLHL28-202ENST00000396128 ADGRG4Q8IZF6 3080 aa2.46□□□□□ -2.02
KLHL28-202ENST00000396128 CELSR2Q9HCU4 2923 aa2.46□□□□□ -2.02
KLHL28-202ENST00000396128 ASH1LQ9NR48 2969 aaKnown RBP2.45□□□□□ -2.02
KLHL28-202ENST00000396128 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
KLHL28-202ENST00000396128 CELSR1Q9NYQ6 3014 aa2.44□□□□□ -2.02
KLHL28-202ENST00000396128 ZZEF1O43149 2961 aa2.44□□□□□ -2.02
KLHL28-202ENST00000396128 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
KLHL28-202ENST00000396128 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
KLHL28-202ENST00000396128 KRTAP19-4Q3LI73 84 aa2.43□□□□□ -2.02
KLHL28-202ENST00000396128 FBN2P35556 2912 aa2.43□□□□□ -2.02
KLHL28-202ENST00000396128 CUBNO60494 3623 aa2.41□□□□□ -2.02
KLHL28-202ENST00000396128 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
KLHL28-202ENST00000396128 BSNQ9UPA5 3926 aa2.4□□□□□ -2.03
KLHL28-202ENST00000396128 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
KLHL28-202ENST00000396128 MT2AP02795 61 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms