RNA–Protein interactions for RNA: ENST00000395833.7

LMO2-202, Transcript of LIM domain only 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-202ENST00000395833 C8orf17Q9NRJ1 99 aa16.75■□□□□ 0.27
LMO2-202ENST00000395833 SMIM20Q8N5G0 67 aa16.72■□□□□ 0.27
LMO2-202ENST00000395833 SERP2Q8N6R1 65 aa16.72■□□□□ 0.27
LMO2-202ENST00000395833 KRTAP29-1A8MX34 341 aaPredicted RBP16.7■□□□□ 0.26
LMO2-202ENST00000395833 TRAV7A0A075B6U4 112 aa16.68■□□□□ 0.26
LMO2-202ENST00000395833 hDV103S1A0JD37 113 aa16.68■□□□□ 0.26
LMO2-202ENST00000395833 COX7CP15954 63 aa16.65■□□□□ 0.26
LMO2-202ENST00000395833 FLG2Q5D862 2391 aaPredicted RBP16.65■□□□□ 0.26
LMO2-202ENST00000395833 NOTCH2NLQ7Z3S9 236 aa16.64■□□□□ 0.25
LMO2-202ENST00000395833 LRP1Q07954 4544 aaKnown RBP16.64■□□□□ 0.25
LMO2-202ENST00000395833 C8orf87E5RJ46 101 aa16.62■□□□□ 0.25
LMO2-202ENST00000395833 OCR1Q9BZK8 76 aa16.62■□□□□ 0.25
LMO2-202ENST00000395833 CCDC179H3BU77 68 aa16.61■□□□□ 0.25
LMO2-202ENST00000395833 KRTAP4-5Q9BYR2 181 aa16.61■□□□□ 0.25
LMO2-202ENST00000395833 FAT3Q8TDW7 4589 aa16.6■□□□□ 0.25
LMO2-202ENST00000395833 UQCRQO14949 82 aa16.59■□□□□ 0.25
LMO2-202ENST00000395833 TNXBP22105 4242 aa16.56■□□□□ 0.24
LMO2-202ENST00000395833 TMEM254Q8TBM7 123 aa16.56■□□□□ 0.24
LMO2-202ENST00000395833 LINC00313P59037 77 aa16.55■□□□□ 0.24
LMO2-202ENST00000395833 MT1HL1P0DM35 61 aa16.53■□□□□ 0.24
LMO2-202ENST00000395833 RETNLBQ9BQ08 111 aa16.53■□□□□ 0.24
LMO2-202ENST00000395833 MRPL34Q9BQ48 92 aaKnown RBP16.53■□□□□ 0.24
LMO2-202ENST00000395833 BIRC6Q9NR09 4857 aa16.51■□□□□ 0.23
LMO2-202ENST00000395833 OXTP01178 125 aa16.5■□□□□ 0.23
LMO2-202ENST00000395833 NDUFS5O43920 106 aa16.47■□□□□ 0.23
LMO2-202ENST00000395833 C20orf197Q8N268 126 aa16.43■□□□□ 0.22
LMO2-202ENST00000395833 TP53AIP1Q9HCN2 124 aa16.37■□□□□ 0.21
LMO2-202ENST00000395833 MYCBP2O75592 4640 aa16.37■□□□□ 0.21
LMO2-202ENST00000395833 KRTAP16-1A8MUX0 517 aa16.35■□□□□ 0.21
LMO2-202ENST00000395833 C5orf47Q569G3 176 aa16.34■□□□□ 0.21
LMO2-202ENST00000395833 DMBT1Q9UGM3 2413 aaPredicted RBP16.33■□□□□ 0.2
LMO2-202ENST00000395833 SNURFQ9Y675 71 aa16.32■□□□□ 0.2
LMO2-202ENST00000395833 HERC2O95714 4834 aa16.3■□□□□ 0.2
LMO2-202ENST00000395833 C9orf92A6NGG3 77 aa16.29■□□□□ 0.2
LMO2-202ENST00000395833 H0Y9P7 68 aa16.28■□□□□ 0.2
LMO2-202ENST00000395833 MP68P56378 58 aa16.27■□□□□ 0.2
LMO2-202ENST00000395833 Q8N9P0 234 aaPredicted RBP16.27■□□□□ 0.2
LMO2-202ENST00000395833 FP248Q71RG6 208 aaPredicted RBP16.26■□□□□ 0.19
LMO2-202ENST00000395833 TRAV22A0A0B4J277 110 aa16.25■□□□□ 0.19
LMO2-202ENST00000395833 A0A0U1RQV1 116 aa16.25■□□□□ 0.19
LMO2-202ENST00000395833 KLKP1Q107X0 134 aa16.24■□□□□ 0.19
LMO2-202ENST00000395833 CYSTM1Q9H1C7 97 aa16.24■□□□□ 0.19
LMO2-202ENST00000395833 LINC00208Q96KT6 92 aa16.18■□□□□ 0.18
LMO2-202ENST00000395833 IGLV7-46A0A075B6I9 117 aa16.17■□□□□ 0.18
LMO2-202ENST00000395833 J3QL48 77 aa16.15■□□□□ 0.18
LMO2-202ENST00000395833 ABCA13Q86UQ4 5058 aa16.15■□□□□ 0.18
LMO2-202ENST00000395833 H3BPC8 53 aa16.14■□□□□ 0.17
LMO2-202ENST00000395833 Q5W150 140 aa16.12■□□□□ 0.17
LMO2-202ENST00000395833 ZCCHC13Q8WW36 166 aaKnown RBP16.11■□□□□ 0.17
LMO2-202ENST00000395833 C1orf64Q8NEQ6 169 aa16.1■□□□□ 0.17
LMO2-202ENST00000395833 PRR4Q16378 134 aa16.09■□□□□ 0.17
LMO2-202ENST00000395833 NDUFC1O43677 76 aa16.07■□□□□ 0.16
LMO2-202ENST00000395833 KRTAP13-3Q3SY46 172 aa16.05■□□□□ 0.16
LMO2-202ENST00000395833 H7BZZ5 65 aa16.05■□□□□ 0.16
LMO2-202ENST00000395833 C20orf166-AS1Q96NR2 134 aa16.05■□□□□ 0.16
LMO2-202ENST00000395833 A8MUU9 505 aa16.03■□□□□ 0.16
LMO2-202ENST00000395833 TMEM258P61165 79 aa15.96■□□□□ 0.15
LMO2-202ENST00000395833 LOC101927531A0A1B0GV80 90 aa15.95■□□□□ 0.14
LMO2-202ENST00000395833 Q75L30 129 aa15.92■□□□□ 0.14
LMO2-202ENST00000395833 XP32Q5T750 250 aa15.86■□□□□ 0.13
LMO2-202ENST00000395833 PCOTHQ58A44 107 aa15.86■□□□□ 0.13
LMO2-202ENST00000395833 FAM236DA0A1B0GTK5 79 aa15.84■□□□□ 0.13
LMO2-202ENST00000395833 FAM236CP0DP71 79 aa15.84■□□□□ 0.13
LMO2-202ENST00000395833 IGKV2-30P06310 120 aa15.83■□□□□ 0.13
LMO2-202ENST00000395833 CYP4F30PQ9H0H9 118 aa15.83■□□□□ 0.12
LMO2-202ENST00000395833 TPRXLQ17RH7 258 aa15.82■□□□□ 0.12
LMO2-202ENST00000395833 IGKV2D-30A0A075B6S6 120 aa15.8■□□□□ 0.12
LMO2-202ENST00000395833 RPL37P61927 97 aaKnown RBP15.78■□□□□ 0.12
LMO2-202ENST00000395833 ATP5EP56381 51 aaPredicted RBP15.73■□□□□ 0.11
LMO2-202ENST00000395833 ATP11AUNQ6ZP68 121 aa15.73■□□□□ 0.11
LMO2-202ENST00000395833 C7orf65Q6ZTY9 151 aa15.69■□□□□ 0.1
LMO2-202ENST00000395833 SPANXA2-OT1Q8N9U9 137 aa15.67■□□□□ 0.1
LMO2-202ENST00000395833 HRES1P13985 223 aa15.6■□□□□ 0.09
LMO2-202ENST00000395833 PCLOQ9Y6V0 5065 aa15.54■□□□□ 0.08
LMO2-202ENST00000395833 SPINK7P58062 85 aa15.54■□□□□ 0.08
LMO2-202ENST00000395833 SERP1Q9Y6X1 66 aa15.48■□□□□ 0.07
LMO2-202ENST00000395833 LPAP08519 4548 aa15.46■□□□□ 0.07
LMO2-202ENST00000395833 RPS28P62857 69 aaKnown RBP15.38■□□□□ 0.05
LMO2-202ENST00000395833 C4orf26Q17RF5 130 aa15.35■□□□□ 0.05
LMO2-202ENST00000395833 LRP2P98164 4655 aa15.35■□□□□ 0.05
LMO2-202ENST00000395833 DMAC1Q96GE9 116 aa15.34■□□□□ 0.05
LMO2-202ENST00000395833 SEC61BP60468 96 aaKnown RBP15.31■□□□□ 0.04
LMO2-202ENST00000395833 ACYP2P14621 99 aa15.27■□□□□ 0.03
LMO2-202ENST00000395833 COA5Q86WW8 74 aa15.27■□□□□ 0.03
LMO2-202ENST00000395833 HERC1Q15751 4861 aa15.18■□□□□ 0.02
LMO2-202ENST00000395833 A8MUN3 132 aa15.17■□□□□ 0.02
LMO2-202ENST00000395833 COX6B2Q6YFQ2 88 aa15.15■□□□□ 0.02
LMO2-202ENST00000395833 KRTAP3-1Q9BYR8 98 aa15.09■□□□□ 0.01
LMO2-202ENST00000395833 CHKB-CPT1BH3BT56 60 aa15.09■□□□□ 0.01
LMO2-202ENST00000395833 HMCN2Q8NDA2 5059 aa15.07■□□□□ 0
LMO2-202ENST00000395833 SMIM26A0A096LP01 95 aa15.06■□□□□ 0
LMO2-202ENST00000395833 MUC17Q685J3 4493 aa15.03■□□□□ -0
LMO2-202ENST00000395833 KRTAP4-1Q9BYQ7 146 aa14.96□□□□□ -0.01
LMO2-202ENST00000395833 MPLKIPQ8TAP9 179 aa14.94□□□□□ -0.02
LMO2-202ENST00000395833 RBM12B-AS1Q9P1G2 102 aa14.94□□□□□ -0.02
LMO2-202ENST00000395833 H1FX-AS1Q4G0G2 97 aa14.79□□□□□ -0.04
LMO2-202ENST00000395833 Q1T7F1 81 aa14.74□□□□□ -0.05
LMO2-202ENST00000395833 SPTSSBQ8NFR3 76 aa14.74□□□□□ -0.05
LMO2-202ENST00000395833 V9GYY9 64 aa14.72□□□□□ -0.05
LMO2-202ENST00000395833 S4R3F8 94 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms