RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 COL6A3P12111 3177 aa9.57□□□□□ -0.88
SREBF1-203ENST00000395751 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
SREBF1-203ENST00000395751 DMXL1Q9Y485 3027 aa9.53□□□□□ -0.88
SREBF1-203ENST00000395751 M0QZ58 72 aa9.53□□□□□ -0.88
SREBF1-203ENST00000395751 CELSR2Q9HCU4 2923 aa9.53□□□□□ -0.88
SREBF1-203ENST00000395751 SPEGQ15772 3267 aa9.51□□□□□ -0.89
SREBF1-203ENST00000395751 NIPBLQ6KC79 2804 aaeCLIP9.51□□□□□ -0.89
SREBF1-203ENST00000395751 SZT2Q5T011 3432 aa9.5□□□□□ -0.89
SREBF1-203ENST00000395751 IGSF10Q6WRI0 2623 aa9.49□□□□□ -0.89
SREBF1-203ENST00000395751 H0YAA0 97 aa9.49□□□□□ -0.89
SREBF1-203ENST00000395751 ZANQ9Y493 2812 aa9.45□□□□□ -0.9
SREBF1-203ENST00000395751 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
SREBF1-203ENST00000395751 KRTAP13-2Q52LG2 175 aa9.41□□□□□ -0.9
SREBF1-203ENST00000395751 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
SREBF1-203ENST00000395751 KRTAP10-2P60368 255 aa9.4□□□□□ -0.9
SREBF1-203ENST00000395751 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
SREBF1-203ENST00000395751 C10orf95Q9H7T3 257 aa9.38□□□□□ -0.91
SREBF1-203ENST00000395751 ITPR2Q14571 2701 aa9.37□□□□□ -0.91
SREBF1-203ENST00000395751 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
SREBF1-203ENST00000395751 DCHS2Q6V1P9 2916 aa9.32□□□□□ -0.92
SREBF1-203ENST00000395751 FBN2P35556 2912 aa9.31□□□□□ -0.92
SREBF1-203ENST00000395751 HRNRQ86YZ3 2850 aaPredicted RBP9.29□□□□□ -0.92
SREBF1-203ENST00000395751 J3QL48 77 aa9.29□□□□□ -0.92
SREBF1-203ENST00000395751 NF1P21359 2839 aa9.28□□□□□ -0.92
SREBF1-203ENST00000395751 P0C880 135 aa9.25□□□□□ -0.93
SREBF1-203ENST00000395751 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
SREBF1-203ENST00000395751 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
SREBF1-203ENST00000395751 LOC400499M0QZD8 3231 aa9.19□□□□□ -0.94
SREBF1-203ENST00000395751 TGP01266 2768 aa9.13□□□□□ -0.95
SREBF1-203ENST00000395751 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
SREBF1-203ENST00000395751 CRYBG3Q68DQ2 2970 aa9.12□□□□□ -0.95
SREBF1-203ENST00000395751 EYSQ5T1H1 3165 aa9.08□□□□□ -0.96
SREBF1-203ENST00000395751 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
SREBF1-203ENST00000395751 MXRA5Q9NR99 2828 aa9.05□□□□□ -0.96
SREBF1-203ENST00000395751 USP34Q70CQ2 3546 aa9.03□□□□□ -0.96
SREBF1-203ENST00000395751 DCHS1Q96JQ0 3298 aa9□□□□□ -0.97
SREBF1-203ENST00000395751 SPTBN5Q9NRC6 3674 aaKnown RBP8.96□□□□□ -0.98
SREBF1-203ENST00000395751 PDZD2O15018 2839 aa8.94□□□□□ -0.98
SREBF1-203ENST00000395751 MYO15AQ9UKN7 3530 aa8.94□□□□□ -0.98
SREBF1-203ENST00000395751 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
SREBF1-203ENST00000395751 TNP1P09430 55 aa8.93□□□□□ -0.98
SREBF1-203ENST00000395751 Q5VSD8 79 aa8.92□□□□□ -0.98
SREBF1-203ENST00000395751 M0R2T5 61 aa8.9□□□□□ -0.98
SREBF1-203ENST00000395751 KRTAP10-8P60410 259 aa8.89□□□□□ -0.99
SREBF1-203ENST00000395751 TENM3Q9P273 2699 aa8.89□□□□□ -0.99
SREBF1-203ENST00000395751 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
SREBF1-203ENST00000395751 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
SREBF1-203ENST00000395751 WDFY3Q8IZQ1 3526 aa8.83□□□□□ -1
SREBF1-203ENST00000395751 TENM4Q6N022 2769 aa8.78□□□□□ -1
SREBF1-203ENST00000395751 CSMD1Q96PZ7 3565 aa8.71□□□□□ -1.02
SREBF1-203ENST00000395751 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
SREBF1-203ENST00000395751 XP32Q5T750 250 aa8.63□□□□□ -1.03
SREBF1-203ENST00000395751 ZFHX4Q86UP3 3567 aa8.62□□□□□ -1.03
SREBF1-203ENST00000395751 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
SREBF1-203ENST00000395751 KRTAP15-1Q3LI76 137 aa8.59□□□□□ -1.03
SREBF1-203ENST00000395751 RELNP78509 3460 aa8.58□□□□□ -1.04
SREBF1-203ENST00000395751 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
SREBF1-203ENST00000395751 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
SREBF1-203ENST00000395751 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
SREBF1-203ENST00000395751 PKD1L1Q8TDX9 2849 aa8.57□□□□□ -1.04
SREBF1-203ENST00000395751 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
SREBF1-203ENST00000395751 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
SREBF1-203ENST00000395751 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
SREBF1-203ENST00000395751 SMG1Q96Q15 3661 aaKnown RBP8.45□□□□□ -1.06
SREBF1-203ENST00000395751 VWFP04275 2813 aa8.45□□□□□ -1.06
SREBF1-203ENST00000395751 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
SREBF1-203ENST00000395751 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
SREBF1-203ENST00000395751 KRTAP21-3Q3LHN1 58 aa8.32□□□□□ -1.08
SREBF1-203ENST00000395751 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
SREBF1-203ENST00000395751 CUBNO60494 3623 aa8.29□□□□□ -1.08
SREBF1-203ENST00000395751 LAMA5O15230 3695 aa8.28□□□□□ -1.08
SREBF1-203ENST00000395751 DMDP11532 3685 aa8.28□□□□□ -1.08
SREBF1-203ENST00000395751 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.09
SREBF1-203ENST00000395751 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
SREBF1-203ENST00000395751 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
SREBF1-203ENST00000395751 MEGF8Q7Z7M0 2845 aa8.23□□□□□ -1.09
SREBF1-203ENST00000395751 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.11
SREBF1-203ENST00000395751 COL7A1Q02388 2944 aa8.12□□□□□ -1.11
SREBF1-203ENST00000395751 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
SREBF1-203ENST00000395751 SPENQ96T58 3664 aaKnown RBP8.09□□□□□ -1.11
SREBF1-203ENST00000395751 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
SREBF1-203ENST00000395751 INE1O15225 51 aa8.06□□□□□ -1.12
SREBF1-203ENST00000395751 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
SREBF1-203ENST00000395751 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
SREBF1-203ENST00000395751 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
SREBF1-203ENST00000395751 TRRAPQ9Y4A5 3859 aa7.68□□□□□ -1.18
SREBF1-203ENST00000395751 CSMD2Q7Z408 3487 aa7.65□□□□□ -1.18
SREBF1-203ENST00000395751 NBPF19A0A087WUL8 3843 aa7.64□□□□□ -1.19
SREBF1-203ENST00000395751 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
SREBF1-203ENST00000395751 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
SREBF1-203ENST00000395751 BSNQ9UPA5 3926 aa7.49□□□□□ -1.21
SREBF1-203ENST00000395751 VPS13CQ709C8 3753 aa7.47□□□□□ -1.21
SREBF1-203ENST00000395751 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
SREBF1-203ENST00000395751 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
SREBF1-203ENST00000395751 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
SREBF1-203ENST00000395751 ALMS1Q8TCU4 4167 aa7.31□□□□□ -1.24
SREBF1-203ENST00000395751 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
SREBF1-203ENST00000395751 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
SREBF1-203ENST00000395751 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
SREBF1-203ENST00000395751 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms