RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 TENM1Q9UKZ4 2725 aa3.64□□□□□ -1.83
A1CF-206ENST00000395489 TNP1P09430 55 aa3.64□□□□□ -1.83
A1CF-206ENST00000395489 FREM2Q5SZK8 3169 aa3.63□□□□□ -1.83
A1CF-206ENST00000395489 VCANP13611 3396 aa3.63□□□□□ -1.83
A1CF-206ENST00000395489 HTTP42858 3142 aa3.63□□□□□ -1.83
A1CF-206ENST00000395489 CELSR3Q9NYQ7 3312 aa3.63□□□□□ -1.83
A1CF-206ENST00000395489 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
A1CF-206ENST00000395489 EYSQ5T1H1 3165 aa3.61□□□□□ -1.83
A1CF-206ENST00000395489 ASH1LQ9NR48 2969 aaKnown RBP3.6□□□□□ -1.83
A1CF-206ENST00000395489 REV3LO60673 3130 aa3.6□□□□□ -1.83
A1CF-206ENST00000395489 CRYBG3Q68DQ2 2970 aa3.59□□□□□ -1.84
A1CF-206ENST00000395489 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
A1CF-206ENST00000395489 WDFY3Q8IZQ1 3526 aa3.58□□□□□ -1.84
A1CF-206ENST00000395489 ZANQ9Y493 2812 aa3.57□□□□□ -1.84
A1CF-206ENST00000395489 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
A1CF-206ENST00000395489 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
A1CF-206ENST00000395489 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
A1CF-206ENST00000395489 MXRA5Q9NR99 2828 aa3.56□□□□□ -1.84
A1CF-206ENST00000395489 DMXL1Q9Y485 3027 aa3.55□□□□□ -1.84
A1CF-206ENST00000395489 CELSR2Q9HCU4 2923 aa3.55□□□□□ -1.84
A1CF-206ENST00000395489 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
A1CF-206ENST00000395489 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
A1CF-206ENST00000395489 KRTAP10-11P60412 298 aa3.52□□□□□ -1.85
A1CF-206ENST00000395489 Q6ZRN7 208 aaPredicted RBP3.52□□□□□ -1.85
A1CF-206ENST00000395489 HRNRQ86YZ3 2850 aaPredicted RBP3.52□□□□□ -1.85
A1CF-206ENST00000395489 NBPF19A0A087WUL8 3843 aa3.51□□□□□ -1.85
A1CF-206ENST00000395489 MYO15AQ9UKN7 3530 aa3.51□□□□□ -1.85
A1CF-206ENST00000395489 DMXL2Q8TDJ6 3036 aa3.51□□□□□ -1.85
A1CF-206ENST00000395489 SPEGQ15772 3267 aa3.51□□□□□ -1.85
A1CF-206ENST00000395489 Q5VSD8 79 aa3.5□□□□□ -1.85
A1CF-206ENST00000395489 KRTAP10-9P60411 292 aa3.5□□□□□ -1.85
A1CF-206ENST00000395489 DCHS2Q6V1P9 2916 aa3.49□□□□□ -1.85
A1CF-206ENST00000395489 VWFP04275 2813 aa3.48□□□□□ -1.85
A1CF-206ENST00000395489 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
A1CF-206ENST00000395489 DMDP11532 3685 aa3.47□□□□□ -1.85
A1CF-206ENST00000395489 KRTAP7-1Q8IUC3 87 aa3.47□□□□□ -1.85
A1CF-206ENST00000395489 PKD1L1Q8TDX9 2849 aa3.46□□□□□ -1.86
A1CF-206ENST00000395489 ATMQ13315 3056 aa3.45□□□□□ -1.86
A1CF-206ENST00000395489 ADGRG4Q8IZF6 3080 aa3.44□□□□□ -1.86
A1CF-206ENST00000395489 TENM2Q9NT68 2774 aa3.44□□□□□ -1.86
A1CF-206ENST00000395489 SPENQ96T58 3664 aaKnown RBP3.44□□□□□ -1.86
A1CF-206ENST00000395489 LAMA5O15230 3695 aa3.43□□□□□ -1.86
A1CF-206ENST00000395489 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
A1CF-206ENST00000395489 FBN2P35556 2912 aa3.42□□□□□ -1.86
A1CF-206ENST00000395489 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
A1CF-206ENST00000395489 KRTAP10-3P60369 221 aa3.41□□□□□ -1.86
A1CF-206ENST00000395489 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.86
A1CF-206ENST00000395489 MUC3AQ02505 3323 aa3.4□□□□□ -1.87
A1CF-206ENST00000395489 SMR3AQ99954 134 aa3.39□□□□□ -1.87
A1CF-206ENST00000395489 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
A1CF-206ENST00000395489 KRTAP1-3Q8IUG1 177 aa3.38□□□□□ -1.87
A1CF-206ENST00000395489 KRTAP1-1Q07627 177 aa3.38□□□□□ -1.87
A1CF-206ENST00000395489 CFAP47Q6ZTR5 3102 aa3.38□□□□□ -1.87
A1CF-206ENST00000395489 XP32Q5T750 250 aa3.38□□□□□ -1.87
A1CF-206ENST00000395489 ASPMQ8IZT6 3477 aa3.37□□□□□ -1.87
A1CF-206ENST00000395489 LOC400499M0QZD8 3231 aa3.37□□□□□ -1.87
A1CF-206ENST00000395489 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
A1CF-206ENST00000395489 ZFHX4Q86UP3 3567 aa3.35□□□□□ -1.87
A1CF-206ENST00000395489 TENM4Q6N022 2769 aa3.34□□□□□ -1.87
A1CF-206ENST00000395489 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
A1CF-206ENST00000395489 DCHS1Q96JQ0 3298 aa3.31□□□□□ -1.88
A1CF-206ENST00000395489 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
A1CF-206ENST00000395489 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
A1CF-206ENST00000395489 SMG1Q96Q15 3661 aaKnown RBP3.27□□□□□ -1.89
A1CF-206ENST00000395489 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
A1CF-206ENST00000395489 MEGF8Q7Z7M0 2845 aa3.26□□□□□ -1.89
A1CF-206ENST00000395489 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
A1CF-206ENST00000395489 COL7A1Q02388 2944 aa3.23□□□□□ -1.89
A1CF-206ENST00000395489 RELNP78509 3460 aa3.21□□□□□ -1.9
A1CF-206ENST00000395489 VPS13CQ709C8 3753 aa3.21□□□□□ -1.9
A1CF-206ENST00000395489 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
A1CF-206ENST00000395489 BSNQ9UPA5 3926 aa3.2□□□□□ -1.9
A1CF-206ENST00000395489 KRTAP10-1P60331 282 aa3.19□□□□□ -1.9
A1CF-206ENST00000395489 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
A1CF-206ENST00000395489 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
A1CF-206ENST00000395489 M0R2T5 61 aa3.16□□□□□ -1.9
A1CF-206ENST00000395489 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.9
A1CF-206ENST00000395489 CSMD1Q96PZ7 3565 aa3.13□□□□□ -1.91
A1CF-206ENST00000395489 KRTAP10-2P60368 255 aa3.13□□□□□ -1.91
A1CF-206ENST00000395489 OTOGQ6ZRI0 2925 aa3.12□□□□□ -1.91
A1CF-206ENST00000395489 FBN3Q75N90 2809 aa3.1□□□□□ -1.91
A1CF-206ENST00000395489 CSMD2Q7Z408 3487 aa3.09□□□□□ -1.91
A1CF-206ENST00000395489 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.92
A1CF-206ENST00000395489 AKAP9Q99996 3911 aa3.08□□□□□ -1.92
A1CF-206ENST00000395489 ZNF469Q96JG9 3925 aaPredicted RBP3.06□□□□□ -1.92
A1CF-206ENST00000395489 KRTAP3-2Q9BYR7 98 aa3.03□□□□□ -1.92
A1CF-206ENST00000395489 TRRAPQ9Y4A5 3859 aa3□□□□□ -1.93
A1CF-206ENST00000395489 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
A1CF-206ENST00000395489 SVEP1Q4LDE5 3571 aa2.97□□□□□ -1.93
A1CF-206ENST00000395489 CUBNO60494 3623 aa2.95□□□□□ -1.94
A1CF-206ENST00000395489 KRTAP3-3Q9BYR6 98 aa2.94□□□□□ -1.94
A1CF-206ENST00000395489 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
A1CF-206ENST00000395489 LYSTQ99698 3801 aa2.84□□□□□ -1.96
A1CF-206ENST00000395489 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
A1CF-206ENST00000395489 KRTAP21-3Q3LHN1 58 aa2.81□□□□□ -1.96
A1CF-206ENST00000395489 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
A1CF-206ENST00000395489 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
A1CF-206ENST00000395489 ANK2Q01484 3957 aa2.78□□□□□ -1.96
A1CF-206ENST00000395489 CMYA5Q8N3K9 4069 aa2.78□□□□□ -1.97
A1CF-206ENST00000395489 MT3P25713 68 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms