RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
DYSF-202ENST00000394120 HIVEP1P15822 2718 aa7.36□□□□□ -1.23
DYSF-202ENST00000394120 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
DYSF-202ENST00000394120 CFAP47Q6ZTR5 3102 aa7.35□□□□□ -1.23
DYSF-202ENST00000394120 KRTAP13-2Q52LG2 175 aa7.33□□□□□ -1.24
DYSF-202ENST00000394120 M0QZ58 72 aa7.31□□□□□ -1.24
DYSF-202ENST00000394120 ZANQ9Y493 2812 aa7.31□□□□□ -1.24
DYSF-202ENST00000394120 RPS29P62273 56 aaKnown RBP7.3□□□□□ -1.24
DYSF-202ENST00000394120 CELSR2Q9HCU4 2923 aa7.3□□□□□ -1.24
DYSF-202ENST00000394120 REV3LO60673 3130 aa7.26□□□□□ -1.25
DYSF-202ENST00000394120 HRNRQ86YZ3 2850 aaPredicted RBP7.26□□□□□ -1.25
DYSF-202ENST00000394120 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
DYSF-202ENST00000394120 SPTBN5Q9NRC6 3674 aaKnown RBP7.23□□□□□ -1.25
DYSF-202ENST00000394120 Q5VSD8 79 aa7.22□□□□□ -1.25
DYSF-202ENST00000394120 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
DYSF-202ENST00000394120 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
DYSF-202ENST00000394120 DCHS2Q6V1P9 2916 aa7.19□□□□□ -1.26
DYSF-202ENST00000394120 NDUFAF8A1L188 74 aa7.18□□□□□ -1.26
DYSF-202ENST00000394120 A8MUU9 505 aa7.18□□□□□ -1.26
DYSF-202ENST00000394120 M0R2T5 61 aa7.18□□□□□ -1.26
DYSF-202ENST00000394120 USP34Q70CQ2 3546 aa7.18□□□□□ -1.26
DYSF-202ENST00000394120 EYSQ5T1H1 3165 aa7.17□□□□□ -1.26
DYSF-202ENST00000394120 LOC400499M0QZD8 3231 aa7.15□□□□□ -1.27
DYSF-202ENST00000394120 FBN2P35556 2912 aa7.14□□□□□ -1.27
DYSF-202ENST00000394120 KMT2BQ9UMN6 2715 aaPredicted RBP7.13□□□□□ -1.27
DYSF-202ENST00000394120 NF1P21359 2839 aa7.11□□□□□ -1.27
DYSF-202ENST00000394120 DMXL1Q9Y485 3027 aa7.09□□□□□ -1.27
DYSF-202ENST00000394120 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
DYSF-202ENST00000394120 H0YAA0 97 aa7.06□□□□□ -1.28
DYSF-202ENST00000394120 MYO15AQ9UKN7 3530 aa7.06□□□□□ -1.28
DYSF-202ENST00000394120 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
DYSF-202ENST00000394120 MXRA5Q9NR99 2828 aa6.98□□□□□ -1.29
DYSF-202ENST00000394120 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
DYSF-202ENST00000394120 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
DYSF-202ENST00000394120 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
DYSF-202ENST00000394120 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
DYSF-202ENST00000394120 CRYBG3Q68DQ2 2970 aa6.92□□□□□ -1.3
DYSF-202ENST00000394120 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
DYSF-202ENST00000394120 TGP01266 2768 aa6.84□□□□□ -1.31
DYSF-202ENST00000394120 WDFY3Q8IZQ1 3526 aa6.84□□□□□ -1.32
DYSF-202ENST00000394120 DCHS1Q96JQ0 3298 aa6.83□□□□□ -1.32
DYSF-202ENST00000394120 P0C880 135 aa6.81□□□□□ -1.32
DYSF-202ENST00000394120 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
DYSF-202ENST00000394120 RELNP78509 3460 aa6.8□□□□□ -1.32
DYSF-202ENST00000394120 TNP1P09430 55 aa6.79□□□□□ -1.32
DYSF-202ENST00000394120 XP32Q5T750 250 aa6.78□□□□□ -1.32
DYSF-202ENST00000394120 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
DYSF-202ENST00000394120 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
DYSF-202ENST00000394120 PDZD2O15018 2839 aa6.71□□□□□ -1.33
DYSF-202ENST00000394120 TENM1Q9UKZ4 2725 aa6.68□□□□□ -1.34
DYSF-202ENST00000394120 CSMD1Q96PZ7 3565 aa6.67□□□□□ -1.34
DYSF-202ENST00000394120 MUC3AQ02505 3323 aa6.66□□□□□ -1.34
DYSF-202ENST00000394120 ASPMQ8IZT6 3477 aa6.63□□□□□ -1.35
DYSF-202ENST00000394120 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
DYSF-202ENST00000394120 LAMA5O15230 3695 aa6.61□□□□□ -1.35
DYSF-202ENST00000394120 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
DYSF-202ENST00000394120 VWFP04275 2813 aa6.56□□□□□ -1.36
DYSF-202ENST00000394120 TENM2Q9NT68 2774 aa6.55□□□□□ -1.36
DYSF-202ENST00000394120 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
DYSF-202ENST00000394120 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
DYSF-202ENST00000394120 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
DYSF-202ENST00000394120 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
DYSF-202ENST00000394120 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
DYSF-202ENST00000394120 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
DYSF-202ENST00000394120 DMDP11532 3685 aa6.45□□□□□ -1.38
DYSF-202ENST00000394120 SVEP1Q4LDE5 3571 aa6.45□□□□□ -1.38
DYSF-202ENST00000394120 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
DYSF-202ENST00000394120 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
DYSF-202ENST00000394120 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
DYSF-202ENST00000394120 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
DYSF-202ENST00000394120 SRRM2Q9UQ35 2752 aaKnown RBP6.32□□□□□ -1.4
DYSF-202ENST00000394120 CUBNO60494 3623 aa6.32□□□□□ -1.4
DYSF-202ENST00000394120 FBN3Q75N90 2809 aa6.32□□□□□ -1.4
DYSF-202ENST00000394120 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
DYSF-202ENST00000394120 ANK3Q12955 4377 aaKnown RBP6.25□□□□□ -1.41
DYSF-202ENST00000394120 NBPF19A0A087WUL8 3843 aa6.22□□□□□ -1.41
DYSF-202ENST00000394120 MEGF8Q7Z7M0 2845 aa6.22□□□□□ -1.41
DYSF-202ENST00000394120 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
DYSF-202ENST00000394120 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
DYSF-202ENST00000394120 SPENQ96T58 3664 aaKnown RBP6.18□□□□□ -1.42
DYSF-202ENST00000394120 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
DYSF-202ENST00000394120 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
DYSF-202ENST00000394120 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
DYSF-202ENST00000394120 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
DYSF-202ENST00000394120 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
DYSF-202ENST00000394120 ZFHX3Q15911 3703 aa6.09□□□□□ -1.43
DYSF-202ENST00000394120 COL7A1Q02388 2944 aa6.03□□□□□ -1.44
DYSF-202ENST00000394120 BSNQ9UPA5 3926 aa6.01□□□□□ -1.45
DYSF-202ENST00000394120 HUWE1Q7Z6Z7 4374 aaKnown RBP5.9□□□□□ -1.46
DYSF-202ENST00000394120 VPS13CQ709C8 3753 aa5.9□□□□□ -1.46
DYSF-202ENST00000394120 KRTAP10-4P60372 401 aaPredicted RBP5.87□□□□□ -1.47
DYSF-202ENST00000394120 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
DYSF-202ENST00000394120 INE1O15225 51 aa5.82□□□□□ -1.48
DYSF-202ENST00000394120 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.5
DYSF-202ENST00000394120 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
DYSF-202ENST00000394120 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
DYSF-202ENST00000394120 AKAP9Q99996 3911 aa5.61□□□□□ -1.51
DYSF-202ENST00000394120 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
DYSF-202ENST00000394120 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
DYSF-202ENST00000394120 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms