RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NDUFB1O75438 58 aa13.54□□□□□ -0.24
LRFN4-202ENST00000393952 FP248Q71RG6 208 aaPredicted RBP13.54□□□□□ -0.24
LRFN4-202ENST00000393952 PRR15Q8IV56 129 aa13.53□□□□□ -0.24
LRFN4-202ENST00000393952 IGHV6-1A0A0B4J1U7 121 aa13.51□□□□□ -0.25
LRFN4-202ENST00000393952 PRR4Q16378 134 aa13.51□□□□□ -0.25
LRFN4-202ENST00000393952 IGLV7-46A0A075B6I9 117 aa13.49□□□□□ -0.25
LRFN4-202ENST00000393952 HIST1H4AP62805 103 aaKnown RBP13.48□□□□□ -0.25
LRFN4-202ENST00000393952 NOTCH2NLQ7Z3S9 236 aa13.46□□□□□ -0.25
LRFN4-202ENST00000393952 A0A087WVE0 104 aa13.41□□□□□ -0.26
LRFN4-202ENST00000393952 C8orf17Q9NRJ1 99 aa13.41□□□□□ -0.26
LRFN4-202ENST00000393952 HERC1Q15751 4861 aa13.41□□□□□ -0.26
LRFN4-202ENST00000393952 MMP24-AS1A0A0U1RRL7 71 aa13.39□□□□□ -0.27
LRFN4-202ENST00000393952 C9orf92A6NGG3 77 aa13.39□□□□□ -0.27
LRFN4-202ENST00000393952 C8orf87E5RJ46 101 aa13.39□□□□□ -0.27
LRFN4-202ENST00000393952 LINC00313P59037 77 aa13.39□□□□□ -0.27
LRFN4-202ENST00000393952 IMUPQ9GZP8 106 aa13.37□□□□□ -0.27
LRFN4-202ENST00000393952 KRTAP13-3Q3SY46 172 aa13.35□□□□□ -0.27
LRFN4-202ENST00000393952 HCG22E2RYF7 251 aa13.34□□□□□ -0.27
LRFN4-202ENST00000393952 WFDC13Q8IUB5 93 aa13.34□□□□□ -0.27
LRFN4-202ENST00000393952 hDV103S1A0JD37 113 aa13.3□□□□□ -0.28
LRFN4-202ENST00000393952 CASC2Q6XLA1 102 aa13.3□□□□□ -0.28
LRFN4-202ENST00000393952 KRTAP16-1A8MUX0 517 aa13.29□□□□□ -0.28
LRFN4-202ENST00000393952 TPRXLQ17RH7 258 aa13.28□□□□□ -0.28
LRFN4-202ENST00000393952 TMEM254Q8TBM7 123 aa13.25□□□□□ -0.29
LRFN4-202ENST00000393952 MRPL34Q9BQ48 92 aaKnown RBP13.23□□□□□ -0.29
LRFN4-202ENST00000393952 HMCN2Q8NDA2 5059 aa13.21□□□□□ -0.3
LRFN4-202ENST00000393952 LPAP08519 4548 aa13.21□□□□□ -0.3
LRFN4-202ENST00000393952 XP32Q5T750 250 aa13.19□□□□□ -0.3
LRFN4-202ENST00000393952 FAM236AA0A1B0GUQ0 79 aa13.18□□□□□ -0.3
LRFN4-202ENST00000393952 FAM236BA0A1B0GV22 79 aa13.18□□□□□ -0.3
LRFN4-202ENST00000393952 Q8N9P0 234 aaPredicted RBP13.15□□□□□ -0.3
LRFN4-202ENST00000393952 C20orf166-AS1Q96NR2 134 aa13.13□□□□□ -0.31
LRFN4-202ENST00000393952 A8MUU9 505 aa13.12□□□□□ -0.31
LRFN4-202ENST00000393952 NDUFS5O43920 106 aa13.12□□□□□ -0.31
LRFN4-202ENST00000393952 SCGB1A1P11684 91 aa13.09□□□□□ -0.31
LRFN4-202ENST00000393952 Q75L30 129 aa13.08□□□□□ -0.32
LRFN4-202ENST00000393952 LRP2P98164 4655 aa13.06□□□□□ -0.32
LRFN4-202ENST00000393952 RPL37P61927 97 aaKnown RBP13.05□□□□□ -0.32
LRFN4-202ENST00000393952 OCR1Q9BZK8 76 aa13□□□□□ -0.33
LRFN4-202ENST00000393952 ATOX1O00244 68 aa12.98□□□□□ -0.33
LRFN4-202ENST00000393952 TP53AIP1Q9HCN2 124 aa12.98□□□□□ -0.33
LRFN4-202ENST00000393952 ZCCHC13Q8WW36 166 aaKnown RBP12.94□□□□□ -0.34
LRFN4-202ENST00000393952 Q5W150 140 aa12.94□□□□□ -0.34
LRFN4-202ENST00000393952 UQCRQO14949 82 aa12.92□□□□□ -0.34
LRFN4-202ENST00000393952 ATP11AUNQ6ZP68 121 aa12.92□□□□□ -0.34
LRFN4-202ENST00000393952 SMIM20Q8N5G0 67 aa12.91□□□□□ -0.34
LRFN4-202ENST00000393952 TRAV7A0A075B6U4 112 aa12.89□□□□□ -0.35
LRFN4-202ENST00000393952 PCOTHQ58A44 107 aa12.88□□□□□ -0.35
LRFN4-202ENST00000393952 TRAV22A0A0B4J277 110 aa12.84□□□□□ -0.35
LRFN4-202ENST00000393952 SEC61BP60468 96 aaKnown RBP12.84□□□□□ -0.35
LRFN4-202ENST00000393952 SERP2Q8N6R1 65 aa12.82□□□□□ -0.36
LRFN4-202ENST00000393952 MUC17Q685J3 4493 aa12.82□□□□□ -0.36
LRFN4-202ENST00000393952 H0Y9P7 68 aa12.81□□□□□ -0.36
LRFN4-202ENST00000393952 ANAPC13Q9BS18 74 aa12.79□□□□□ -0.36
LRFN4-202ENST00000393952 C5orf47Q569G3 176 aa12.78□□□□□ -0.36
LRFN4-202ENST00000393952 MP68P56378 58 aa12.74□□□□□ -0.37
LRFN4-202ENST00000393952 COX7CP15954 63 aa12.7□□□□□ -0.38
LRFN4-202ENST00000393952 LINC00208Q96KT6 92 aa12.7□□□□□ -0.38
LRFN4-202ENST00000393952 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
LRFN4-202ENST00000393952 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
LRFN4-202ENST00000393952 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
LRFN4-202ENST00000393952 SPINK7P58062 85 aa12.65□□□□□ -0.38
LRFN4-202ENST00000393952 LOC101927531A0A1B0GV80 90 aa12.64□□□□□ -0.39
LRFN4-202ENST00000393952 H3BPC8 53 aa12.64□□□□□ -0.39
LRFN4-202ENST00000393952 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
LRFN4-202ENST00000393952 KRTAP4-1Q9BYQ7 146 aa12.64□□□□□ -0.39
LRFN4-202ENST00000393952 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
LRFN4-202ENST00000393952 C20orf197Q8N268 126 aa12.63□□□□□ -0.39
LRFN4-202ENST00000393952 A0A0U1RQV1 116 aa12.62□□□□□ -0.39
LRFN4-202ENST00000393952 CYP4F30PQ9H0H9 118 aa12.6□□□□□ -0.39
LRFN4-202ENST00000393952 SNURFQ9Y675 71 aa12.6□□□□□ -0.39
LRFN4-202ENST00000393952 CCDC179H3BU77 68 aa12.54□□□□□ -0.4
LRFN4-202ENST00000393952 RNF213Q63HN8 5207 aa12.52□□□□□ -0.4
LRFN4-202ENST00000393952 KLKP1Q107X0 134 aa12.51□□□□□ -0.41
LRFN4-202ENST00000393952 HRES1P13985 223 aa12.47□□□□□ -0.41
LRFN4-202ENST00000393952 CYSTM1Q9H1C7 97 aa12.43□□□□□ -0.42
LRFN4-202ENST00000393952 PCP4P48539 62 aa12.43□□□□□ -0.42
LRFN4-202ENST00000393952 MUC2Q02817 5179 aa12.42□□□□□ -0.42
LRFN4-202ENST00000393952 C4orf26Q17RF5 130 aa12.38□□□□□ -0.43
LRFN4-202ENST00000393952 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
LRFN4-202ENST00000393952 H7BZZ5 65 aa12.3□□□□□ -0.44
LRFN4-202ENST00000393952 NDUFC1O43677 76 aa12.3□□□□□ -0.44
LRFN4-202ENST00000393952 RBM12B-AS1Q9P1G2 102 aa12.29□□□□□ -0.44
LRFN4-202ENST00000393952 COX6B2Q6YFQ2 88 aa12.26□□□□□ -0.45
LRFN4-202ENST00000393952 KRTAP3-1Q9BYR8 98 aa12.22□□□□□ -0.45
LRFN4-202ENST00000393952 FAM236DA0A1B0GTK5 79 aa12.21□□□□□ -0.46
LRFN4-202ENST00000393952 FAM236CP0DP71 79 aa12.21□□□□□ -0.46
LRFN4-202ENST00000393952 KRTAP19-2Q3LHN2 52 aa12.21□□□□□ -0.46
LRFN4-202ENST00000393952 SPANXA2-OT1Q8N9U9 137 aa12.19□□□□□ -0.46
LRFN4-202ENST00000393952 DMAC1Q96GE9 116 aa12.12□□□□□ -0.47
LRFN4-202ENST00000393952 A8MUN3 132 aa12.09□□□□□ -0.47
LRFN4-202ENST00000393952 H1FX-AS1Q4G0G2 97 aa12.08□□□□□ -0.48
LRFN4-202ENST00000393952 LCE2CQ5TA81 110 aa12.08□□□□□ -0.48
LRFN4-202ENST00000393952 TMEM258P61165 79 aa12.05□□□□□ -0.48
LRFN4-202ENST00000393952 FAT4Q6V0I7 4981 aa12.03□□□□□ -0.48
LRFN4-202ENST00000393952 ACYP2P14621 99 aa11.99□□□□□ -0.49
LRFN4-202ENST00000393952 FLGP20930 4061 aaPredicted RBP11.98□□□□□ -0.49
LRFN4-202ENST00000393952 ATP5EP56381 51 aaPredicted RBP11.96□□□□□ -0.49
LRFN4-202ENST00000393952 S4R3F8 94 aa11.92□□□□□ -0.5
LRFN4-202ENST00000393952 LCA10Q71F78 164 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms