RNA–Protein interactions for RNA: ENST00000393359.6

TGFBRAP1-202, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBRAP1, Length 5,979 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-202ENST00000393359 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
TGFBRAP1-202ENST00000393359 KRTAP10-10P60014 251 aa11.84□□□□□ -0.51
TGFBRAP1-202ENST00000393359 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
TGFBRAP1-202ENST00000393359 COL6A3P12111 3177 aa11.79□□□□□ -0.52
TGFBRAP1-202ENST00000393359 LRBAP50851 2863 aa11.75□□□□□ -0.53
TGFBRAP1-202ENST00000393359 VCANP13611 3396 aa11.7□□□□□ -0.54
TGFBRAP1-202ENST00000393359 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
TGFBRAP1-202ENST00000393359 ITPR1Q14643 2758 aa11.69□□□□□ -0.54
TGFBRAP1-202ENST00000393359 HIVEP1P15822 2718 aa11.68□□□□□ -0.54
TGFBRAP1-202ENST00000393359 ASH1LQ9NR48 2969 aaKnown RBP11.68□□□□□ -0.54
TGFBRAP1-202ENST00000393359 UTP20O75691 2785 aaKnown RBP11.67□□□□□ -0.54
TGFBRAP1-202ENST00000393359 DMXL2Q8TDJ6 3036 aa11.66□□□□□ -0.54
TGFBRAP1-202ENST00000393359 SZT2Q5T011 3432 aa11.66□□□□□ -0.54
TGFBRAP1-202ENST00000393359 CFAP47Q6ZTR5 3102 aa11.61□□□□□ -0.55
TGFBRAP1-202ENST00000393359 TACC2O95359 2948 aa11.61□□□□□ -0.55
TGFBRAP1-202ENST00000393359 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
TGFBRAP1-202ENST00000393359 PRO2289Q9P1D8 64 aa11.6□□□□□ -0.55
TGFBRAP1-202ENST00000393359 CRYBG3Q68DQ2 2970 aa11.6□□□□□ -0.55
TGFBRAP1-202ENST00000393359 KMT2BQ9UMN6 2715 aaPredicted RBP11.58□□□□□ -0.56
TGFBRAP1-202ENST00000393359 REV3LO60673 3130 aa11.57□□□□□ -0.56
TGFBRAP1-202ENST00000393359 ATMQ13315 3056 aa11.57□□□□□ -0.56
TGFBRAP1-202ENST00000393359 LAMA1P25391 3075 aa11.55□□□□□ -0.56
TGFBRAP1-202ENST00000393359 KRTAP12-2P59991 146 aa11.53□□□□□ -0.56
TGFBRAP1-202ENST00000393359 KRTAP21-3Q3LHN1 58 aa11.52□□□□□ -0.57
TGFBRAP1-202ENST00000393359 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
TGFBRAP1-202ENST00000393359 BOD1L1Q8NFC6 3051 aa11.46□□□□□ -0.57
TGFBRAP1-202ENST00000393359 COL12A1Q99715 3063 aa11.43□□□□□ -0.58
TGFBRAP1-202ENST00000393359 ADGRG4Q8IZF6 3080 aa11.43□□□□□ -0.58
TGFBRAP1-202ENST00000393359 ZZEF1O43149 2961 aa11.29□□□□□ -0.6
TGFBRAP1-202ENST00000393359 FRYLO94915 3013 aa11.27□□□□□ -0.61
TGFBRAP1-202ENST00000393359 SPEGQ15772 3267 aa11.27□□□□□ -0.61
TGFBRAP1-202ENST00000393359 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
TGFBRAP1-202ENST00000393359 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
TGFBRAP1-202ENST00000393359 KRTAP13-4Q3LI77 160 aa11.2□□□□□ -0.62
TGFBRAP1-202ENST00000393359 USP34Q70CQ2 3546 aa11.2□□□□□ -0.62
TGFBRAP1-202ENST00000393359 KRTAP12-1P59990 96 aa11.16□□□□□ -0.62
TGFBRAP1-202ENST00000393359 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
TGFBRAP1-202ENST00000393359 FLNCQ14315 2725 aa11.14□□□□□ -0.63
TGFBRAP1-202ENST00000393359 TENM4Q6N022 2769 aa11.09□□□□□ -0.63
TGFBRAP1-202ENST00000393359 DCHS2Q6V1P9 2916 aa11.07□□□□□ -0.64
TGFBRAP1-202ENST00000393359 TGP01266 2768 aa11□□□□□ -0.65
TGFBRAP1-202ENST00000393359 NIPBLQ6KC79 2804 aaeCLIP11□□□□□ -0.65
TGFBRAP1-202ENST00000393359 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
TGFBRAP1-202ENST00000393359 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.65
TGFBRAP1-202ENST00000393359 KRTAP15-1Q3LI76 137 aa10.94□□□□□ -0.66
TGFBRAP1-202ENST00000393359 HRNRQ86YZ3 2850 aaPredicted RBP10.89□□□□□ -0.67
TGFBRAP1-202ENST00000393359 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
TGFBRAP1-202ENST00000393359 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
TGFBRAP1-202ENST00000393359 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
TGFBRAP1-202ENST00000393359 FBN2P35556 2912 aa10.76□□□□□ -0.69
TGFBRAP1-202ENST00000393359 NF1P21359 2839 aa10.75□□□□□ -0.69
TGFBRAP1-202ENST00000393359 MYO15AQ9UKN7 3530 aa10.74□□□□□ -0.69
TGFBRAP1-202ENST00000393359 CELSR1Q9NYQ6 3014 aa10.73□□□□□ -0.69
TGFBRAP1-202ENST00000393359 WDFY3Q8IZQ1 3526 aa10.72□□□□□ -0.69
TGFBRAP1-202ENST00000393359 KRTAP10-6P60371 365 aaPredicted RBP10.68□□□□□ -0.7
TGFBRAP1-202ENST00000393359 DMXL1Q9Y485 3027 aa10.66□□□□□ -0.7
TGFBRAP1-202ENST00000393359 ASPMQ8IZT6 3477 aa10.65□□□□□ -0.7
TGFBRAP1-202ENST00000393359 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
TGFBRAP1-202ENST00000393359 DCHS1Q96JQ0 3298 aa10.6□□□□□ -0.71
TGFBRAP1-202ENST00000393359 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
TGFBRAP1-202ENST00000393359 CRCT1Q9UGL9 99 aa10.52□□□□□ -0.73
TGFBRAP1-202ENST00000393359 ZFHX4Q86UP3 3567 aa10.45□□□□□ -0.74
TGFBRAP1-202ENST00000393359 CSMD1Q96PZ7 3565 aa10.45□□□□□ -0.74
TGFBRAP1-202ENST00000393359 RELNP78509 3460 aa10.44□□□□□ -0.74
TGFBRAP1-202ENST00000393359 NBPF19A0A087WUL8 3843 aa10.39□□□□□ -0.75
TGFBRAP1-202ENST00000393359 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
TGFBRAP1-202ENST00000393359 INE1O15225 51 aa10.31□□□□□ -0.76
TGFBRAP1-202ENST00000393359 VWFP04275 2813 aa10.27□□□□□ -0.77
TGFBRAP1-202ENST00000393359 KRTAP10-12P60413 245 aa10.27□□□□□ -0.77
TGFBRAP1-202ENST00000393359 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
TGFBRAP1-202ENST00000393359 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
TGFBRAP1-202ENST00000393359 PDZD2O15018 2839 aa10.25□□□□□ -0.77
TGFBRAP1-202ENST00000393359 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
TGFBRAP1-202ENST00000393359 LAMA5O15230 3695 aa10.17□□□□□ -0.78
TGFBRAP1-202ENST00000393359 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
TGFBRAP1-202ENST00000393359 ANK3Q12955 4377 aaKnown RBP10.09□□□□□ -0.79
TGFBRAP1-202ENST00000393359 SMG1Q96Q15 3661 aaKnown RBP10.04□□□□□ -0.8
TGFBRAP1-202ENST00000393359 KRTAP12-3P60328 96 aa9.98□□□□□ -0.81
TGFBRAP1-202ENST00000393359 LCE3AQ5TA76 89 aa9.98□□□□□ -0.81
TGFBRAP1-202ENST00000393359 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
TGFBRAP1-202ENST00000393359 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
TGFBRAP1-202ENST00000393359 MEGF8Q7Z7M0 2845 aa9.81□□□□□ -0.84
TGFBRAP1-202ENST00000393359 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
TGFBRAP1-202ENST00000393359 FBN3Q75N90 2809 aa9.8□□□□□ -0.84
TGFBRAP1-202ENST00000393359 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.85
TGFBRAP1-202ENST00000393359 ZFHX3Q15911 3703 aa9.72□□□□□ -0.85
TGFBRAP1-202ENST00000393359 DMDP11532 3685 aa9.71□□□□□ -0.86
TGFBRAP1-202ENST00000393359 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
TGFBRAP1-202ENST00000393359 SPENQ96T58 3664 aaKnown RBP9.69□□□□□ -0.86
TGFBRAP1-202ENST00000393359 FBN1P35555 2871 aaKnown RBP9.67□□□□□ -0.86
TGFBRAP1-202ENST00000393359 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
TGFBRAP1-202ENST00000393359 CUBNO60494 3623 aa9.62□□□□□ -0.87
TGFBRAP1-202ENST00000393359 KRTAP23-1A1A580 65 aa9.61□□□□□ -0.87
TGFBRAP1-202ENST00000393359 CSMD2Q7Z408 3487 aa9.6□□□□□ -0.87
TGFBRAP1-202ENST00000393359 TRRAPQ9Y4A5 3859 aa9.59□□□□□ -0.87
TGFBRAP1-202ENST00000393359 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
TGFBRAP1-202ENST00000393359 OTOGQ6ZRI0 2925 aa9.53□□□□□ -0.88
TGFBRAP1-202ENST00000393359 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
TGFBRAP1-202ENST00000393359 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
TGFBRAP1-202ENST00000393359 KRTAP8-1Q8IUC2 63 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms