RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 DEFB116Q30KQ4 102 aa7.84□□□□□ -1.15
PTN-202ENST00000393083 Q8N9L7 120 aa7.84□□□□□ -1.15
PTN-202ENST00000393083 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
PTN-202ENST00000393083 DSCR10P59022 87 aa7.82□□□□□ -1.16
PTN-202ENST00000393083 Q96NJ1 140 aa7.82□□□□□ -1.16
PTN-202ENST00000393083 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
PTN-202ENST00000393083 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
PTN-202ENST00000393083 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
PTN-202ENST00000393083 LINC00304Q8N9R0 145 aa7.8□□□□□ -1.16
PTN-202ENST00000393083 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
PTN-202ENST00000393083 J3KT08 172 aa7.8□□□□□ -1.16
PTN-202ENST00000393083 K7EQZ3 153 aa7.79□□□□□ -1.16
PTN-202ENST00000393083 LIMD2Q9BT23 127 aa7.79□□□□□ -1.16
PTN-202ENST00000393083 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
PTN-202ENST00000393083 SPINK1P00995 79 aa7.77□□□□□ -1.17
PTN-202ENST00000393083 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
PTN-202ENST00000393083 Q5XG85 94 aa7.77□□□□□ -1.17
PTN-202ENST00000393083 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
PTN-202ENST00000393083 A8MWP4 228 aa7.76□□□□□ -1.17
PTN-202ENST00000393083 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
PTN-202ENST00000393083 KRTAP4-12Q9BQ66 201 aa7.73□□□□□ -1.17
PTN-202ENST00000393083 NDUFB1O75438 58 aa7.72□□□□□ -1.17
PTN-202ENST00000393083 PRR15Q8IV56 129 aa7.72□□□□□ -1.17
PTN-202ENST00000393083 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
PTN-202ENST00000393083 ATOX1O00244 68 aa7.7□□□□□ -1.18
PTN-202ENST00000393083 A0A1B0GVX0 72 aa7.69□□□□□ -1.18
PTN-202ENST00000393083 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
PTN-202ENST00000393083 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
PTN-202ENST00000393083 PCP4P48539 62 aa7.68□□□□□ -1.18
PTN-202ENST00000393083 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
PTN-202ENST00000393083 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
PTN-202ENST00000393083 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
PTN-202ENST00000393083 KRTAP9-9Q9BYP9 154 aa7.64□□□□□ -1.19
PTN-202ENST00000393083 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
PTN-202ENST00000393083 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
PTN-202ENST00000393083 CASC2Q6XLA1 102 aa7.63□□□□□ -1.19
PTN-202ENST00000393083 LRP2P98164 4655 aa7.62□□□□□ -1.19
PTN-202ENST00000393083 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
PTN-202ENST00000393083 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
PTN-202ENST00000393083 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
PTN-202ENST00000393083 PRR4Q16378 134 aa7.6□□□□□ -1.19
PTN-202ENST00000393083 RETNLBQ9BQ08 111 aa7.6□□□□□ -1.19
PTN-202ENST00000393083 LPAP08519 4548 aa7.59□□□□□ -1.19
PTN-202ENST00000393083 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
PTN-202ENST00000393083 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
PTN-202ENST00000393083 SERP2Q8N6R1 65 aa7.59□□□□□ -1.2
PTN-202ENST00000393083 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
PTN-202ENST00000393083 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
PTN-202ENST00000393083 OCR1Q9BZK8 76 aa7.56□□□□□ -1.2
PTN-202ENST00000393083 COX7CP15954 63 aa7.55□□□□□ -1.2
PTN-202ENST00000393083 LINC00313P59037 77 aa7.55□□□□□ -1.2
PTN-202ENST00000393083 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
PTN-202ENST00000393083 IGLV7-46A0A075B6I9 117 aa7.52□□□□□ -1.21
PTN-202ENST00000393083 CCDC179H3BU77 68 aa7.52□□□□□ -1.21
PTN-202ENST00000393083 UQCRQO14949 82 aa7.52□□□□□ -1.21
PTN-202ENST00000393083 FP248Q71RG6 208 aaPredicted RBP7.52□□□□□ -1.21
PTN-202ENST00000393083 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
PTN-202ENST00000393083 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
PTN-202ENST00000393083 NDUFS5O43920 106 aa7.5□□□□□ -1.21
PTN-202ENST00000393083 KRTAP16-1A8MUX0 517 aa7.49□□□□□ -1.21
PTN-202ENST00000393083 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
PTN-202ENST00000393083 SVIPQ8NHG7 77 aa7.48□□□□□ -1.21
PTN-202ENST00000393083 C9orf92A6NGG3 77 aa7.46□□□□□ -1.22
PTN-202ENST00000393083 C20orf197Q8N268 126 aa7.46□□□□□ -1.22
PTN-202ENST00000393083 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
PTN-202ENST00000393083 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
PTN-202ENST00000393083 Q8N9P0 234 aaPredicted RBP7.44□□□□□ -1.22
PTN-202ENST00000393083 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
PTN-202ENST00000393083 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
PTN-202ENST00000393083 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
PTN-202ENST00000393083 H0Y9P7 68 aa7.42□□□□□ -1.22
PTN-202ENST00000393083 MP68P56378 58 aa7.41□□□□□ -1.22
PTN-202ENST00000393083 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
PTN-202ENST00000393083 A0A0U1RQV1 116 aa7.39□□□□□ -1.23
PTN-202ENST00000393083 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
PTN-202ENST00000393083 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
PTN-202ENST00000393083 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
PTN-202ENST00000393083 H3BPC8 53 aa7.35□□□□□ -1.23
PTN-202ENST00000393083 Q5W150 140 aa7.35□□□□□ -1.23
PTN-202ENST00000393083 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
PTN-202ENST00000393083 A8MUU9 505 aa7.34□□□□□ -1.23
PTN-202ENST00000393083 MUC17Q685J3 4493 aa7.34□□□□□ -1.23
PTN-202ENST00000393083 ZCCHC13Q8WW36 166 aaKnown RBP7.33□□□□□ -1.24
PTN-202ENST00000393083 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
PTN-202ENST00000393083 C1orf64Q8NEQ6 169 aa7.33□□□□□ -1.24
PTN-202ENST00000393083 NDUFC1O43677 76 aa7.29□□□□□ -1.24
PTN-202ENST00000393083 Q75L30 129 aa7.29□□□□□ -1.24
PTN-202ENST00000393083 H7BZZ5 65 aa7.29□□□□□ -1.24
PTN-202ENST00000393083 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
PTN-202ENST00000393083 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
PTN-202ENST00000393083 TMEM258P61165 79 aa7.25□□□□□ -1.25
PTN-202ENST00000393083 MUC2Q02817 5179 aa7.24□□□□□ -1.25
PTN-202ENST00000393083 RPL37P61927 97 aaKnown RBP7.24□□□□□ -1.25
PTN-202ENST00000393083 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
PTN-202ENST00000393083 PCOTHQ58A44 107 aa7.22□□□□□ -1.25
PTN-202ENST00000393083 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.25
PTN-202ENST00000393083 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.25
PTN-202ENST00000393083 CYP4F30PQ9H0H9 118 aa7.21□□□□□ -1.25
PTN-202ENST00000393083 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
PTN-202ENST00000393083 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms