RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 R4GN34 69 aa7.2□□□□□ -1.26
CLTC-202ENST00000393043 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
CLTC-202ENST00000393043 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
CLTC-202ENST00000393043 ASH1LQ9NR48 2969 aaKnown RBP7.18□□□□□ -1.26
CLTC-202ENST00000393043 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
CLTC-202ENST00000393043 USP34Q70CQ2 3546 aa7.16□□□□□ -1.26
CLTC-202ENST00000393043 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
CLTC-202ENST00000393043 CELSR2Q9HCU4 2923 aa7.15□□□□□ -1.26
CLTC-202ENST00000393043 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
CLTC-202ENST00000393043 TENM4Q6N022 2769 aa7.1□□□□□ -1.27
CLTC-202ENST00000393043 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
CLTC-202ENST00000393043 CFAP47Q6ZTR5 3102 aa7.1□□□□□ -1.27
CLTC-202ENST00000393043 SPEGQ15772 3267 aa7.09□□□□□ -1.27
CLTC-202ENST00000393043 DCHS2Q6V1P9 2916 aa7.09□□□□□ -1.27
CLTC-202ENST00000393043 ROMO1P60602 79 aa7.09□□□□□ -1.27
CLTC-202ENST00000393043 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
CLTC-202ENST00000393043 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
CLTC-202ENST00000393043 M0QZ58 72 aa7.07□□□□□ -1.28
CLTC-202ENST00000393043 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
CLTC-202ENST00000393043 FBN2P35556 2912 aa7□□□□□ -1.29
CLTC-202ENST00000393043 NF1P21359 2839 aa7□□□□□ -1.29
CLTC-202ENST00000393043 CRYBG3Q68DQ2 2970 aa6.99□□□□□ -1.29
CLTC-202ENST00000393043 A8MUU9 505 aa6.99□□□□□ -1.29
CLTC-202ENST00000393043 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
CLTC-202ENST00000393043 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
CLTC-202ENST00000393043 A6NN06 94 aa6.92□□□□□ -1.3
CLTC-202ENST00000393043 MXRA5Q9NR99 2828 aa6.9□□□□□ -1.3
CLTC-202ENST00000393043 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
CLTC-202ENST00000393043 A8MU10 97 aa6.86□□□□□ -1.31
CLTC-202ENST00000393043 MYO15AQ9UKN7 3530 aa6.8□□□□□ -1.32
CLTC-202ENST00000393043 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
CLTC-202ENST00000393043 CELSR1Q9NYQ6 3014 aa6.77□□□□□ -1.33
CLTC-202ENST00000393043 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
CLTC-202ENST00000393043 XP32Q5T750 250 aa6.76□□□□□ -1.33
CLTC-202ENST00000393043 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
CLTC-202ENST00000393043 PDZD2O15018 2839 aa6.74□□□□□ -1.33
CLTC-202ENST00000393043 RELNP78509 3460 aa6.73□□□□□ -1.33
CLTC-202ENST00000393043 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
CLTC-202ENST00000393043 H3BS24 57 aa6.69□□□□□ -1.34
CLTC-202ENST00000393043 TENM1Q9UKZ4 2725 aa6.69□□□□□ -1.34
CLTC-202ENST00000393043 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
CLTC-202ENST00000393043 TENM2Q9NT68 2774 aa6.64□□□□□ -1.35
CLTC-202ENST00000393043 DCHS1Q96JQ0 3298 aa6.63□□□□□ -1.35
CLTC-202ENST00000393043 WDFY3Q8IZQ1 3526 aa6.62□□□□□ -1.35
CLTC-202ENST00000393043 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
CLTC-202ENST00000393043 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
CLTC-202ENST00000393043 TNP1P09430 55 aa6.57□□□□□ -1.36
CLTC-202ENST00000393043 LAMA5O15230 3695 aa6.55□□□□□ -1.36
CLTC-202ENST00000393043 H0YAA0 97 aa6.55□□□□□ -1.36
CLTC-202ENST00000393043 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
CLTC-202ENST00000393043 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
CLTC-202ENST00000393043 ASPMQ8IZT6 3477 aa6.51□□□□□ -1.37
CLTC-202ENST00000393043 TGP01266 2768 aa6.51□□□□□ -1.37
CLTC-202ENST00000393043 ZFHX4Q86UP3 3567 aa6.5□□□□□ -1.37
CLTC-202ENST00000393043 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
CLTC-202ENST00000393043 PKD1L1Q8TDX9 2849 aa6.46□□□□□ -1.38
CLTC-202ENST00000393043 VWFP04275 2813 aa6.45□□□□□ -1.38
CLTC-202ENST00000393043 DMDP11532 3685 aa6.44□□□□□ -1.38
CLTC-202ENST00000393043 MUC3AQ02505 3323 aa6.42□□□□□ -1.38
CLTC-202ENST00000393043 FBN1P35555 2871 aaKnown RBP6.4□□□□□ -1.38
CLTC-202ENST00000393043 P0C880 135 aa6.4□□□□□ -1.39
CLTC-202ENST00000393043 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.39
CLTC-202ENST00000393043 ANK3Q12955 4377 aaKnown RBP6.39□□□□□ -1.39
CLTC-202ENST00000393043 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
CLTC-202ENST00000393043 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
CLTC-202ENST00000393043 SMG1Q96Q15 3661 aaKnown RBP6.35□□□□□ -1.39
CLTC-202ENST00000393043 CSMD1Q96PZ7 3565 aa6.34□□□□□ -1.39
CLTC-202ENST00000393043 KRTAP10-10P60014 251 aa6.27□□□□□ -1.4
CLTC-202ENST00000393043 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
CLTC-202ENST00000393043 ZFHX3Q15911 3703 aa6.21□□□□□ -1.41
CLTC-202ENST00000393043 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
CLTC-202ENST00000393043 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
CLTC-202ENST00000393043 SVEP1Q4LDE5 3571 aa6.16□□□□□ -1.42
CLTC-202ENST00000393043 SPENQ96T58 3664 aaKnown RBP6.15□□□□□ -1.42
CLTC-202ENST00000393043 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
CLTC-202ENST00000393043 BSNQ9UPA5 3926 aa6.13□□□□□ -1.43
CLTC-202ENST00000393043 CSMD2Q7Z408 3487 aa6.11□□□□□ -1.43
CLTC-202ENST00000393043 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
CLTC-202ENST00000393043 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
CLTC-202ENST00000393043 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
CLTC-202ENST00000393043 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
CLTC-202ENST00000393043 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
CLTC-202ENST00000393043 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
CLTC-202ENST00000393043 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
CLTC-202ENST00000393043 HUWE1Q7Z6Z7 4374 aaKnown RBP5.98□□□□□ -1.45
CLTC-202ENST00000393043 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
CLTC-202ENST00000393043 COL7A1Q02388 2944 aa5.92□□□□□ -1.46
CLTC-202ENST00000393043 CUBNO60494 3623 aa5.91□□□□□ -1.46
CLTC-202ENST00000393043 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
CLTC-202ENST00000393043 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
CLTC-202ENST00000393043 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
CLTC-202ENST00000393043 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
CLTC-202ENST00000393043 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
CLTC-202ENST00000393043 DNAH9Q9NYC9 4486 aa5.73□□□□□ -1.49
CLTC-202ENST00000393043 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
CLTC-202ENST00000393043 ZNF469Q96JG9 3925 aaPredicted RBP5.64□□□□□ -1.51
CLTC-202ENST00000393043 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CLTC-202ENST00000393043 DNAH5Q8TE73 4624 aa5.6□□□□□ -1.51
CLTC-202ENST00000393043 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
CLTC-202ENST00000393043 PLECQ15149 4684 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms