RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 IGHV6-1A0A0B4J1U7 121 aa8.32□□□□□ -1.08
PTPRK-208ENST00000392449 SSPOA2VEC9 5147 aa8.31□□□□□ -1.08
PTPRK-208ENST00000392449 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
PTPRK-208ENST00000392449 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
PTPRK-208ENST00000392449 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
PTPRK-208ENST00000392449 TRACP01848 142 aa8.3□□□□□ -1.08
PTPRK-208ENST00000392449 HRES1P13985 223 aa8.3□□□□□ -1.08
PTPRK-208ENST00000392449 MT2AP02795 61 aa8.29□□□□□ -1.08
PTPRK-208ENST00000392449 COX6CP09669 75 aa8.27□□□□□ -1.09
PTPRK-208ENST00000392449 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.09
PTPRK-208ENST00000392449 VPS25Q9BRG1 176 aa8.27□□□□□ -1.09
PTPRK-208ENST00000392449 H3BQ85 93 aa8.26□□□□□ -1.09
PTPRK-208ENST00000392449 LCE1DQ5T752 114 aa8.26□□□□□ -1.09
PTPRK-208ENST00000392449 UBE2V1Q13404 147 aa8.25□□□□□ -1.09
PTPRK-208ENST00000392449 MT1FP04733 61 aa8.24□□□□□ -1.09
PTPRK-208ENST00000392449 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
PTPRK-208ENST00000392449 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
PTPRK-208ENST00000392449 SMIM6P0DI80 62 aa8.19□□□□□ -1.1
PTPRK-208ENST00000392449 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
PTPRK-208ENST00000392449 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
PTPRK-208ENST00000392449 UQCR10Q9UDW1 63 aa8.19□□□□□ -1.1
PTPRK-208ENST00000392449 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
PTPRK-208ENST00000392449 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
PTPRK-208ENST00000392449 LCE4AQ5TA78 99 aa8.17□□□□□ -1.1
PTPRK-208ENST00000392449 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
PTPRK-208ENST00000392449 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
PTPRK-208ENST00000392449 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
PTPRK-208ENST00000392449 FCGBPQ9Y6R7 5405 aaPredicted RBP8.15□□□□□ -1.11
PTPRK-208ENST00000392449 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
PTPRK-208ENST00000392449 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
PTPRK-208ENST00000392449 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
PTPRK-208ENST00000392449 C9JAW5 83 aa8.13□□□□□ -1.11
PTPRK-208ENST00000392449 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
PTPRK-208ENST00000392449 SPINK7P58062 85 aa8.12□□□□□ -1.11
PTPRK-208ENST00000392449 Q6ZQT0 140 aa8.12□□□□□ -1.11
PTPRK-208ENST00000392449 NAA38Q9BRA0 125 aaKnown RBP8.12□□□□□ -1.11
PTPRK-208ENST00000392449 J3KT08 172 aa8.09□□□□□ -1.11
PTPRK-208ENST00000392449 Q8N9P0 234 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-208ENST00000392449 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
PTPRK-208ENST00000392449 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
PTPRK-208ENST00000392449 NDUFB1O75438 58 aa8.04□□□□□ -1.12
PTPRK-208ENST00000392449 WFDC13Q8IUB5 93 aa8.04□□□□□ -1.12
PTPRK-208ENST00000392449 IGKV3D-7A0A0C4DH55 119 aa8.03□□□□□ -1.12
PTPRK-208ENST00000392449 A8MWP4 228 aa8.03□□□□□ -1.12
PTPRK-208ENST00000392449 ATXN8Q156A1 80 aa8.02□□□□□ -1.13
PTPRK-208ENST00000392449 PCP4L1A6NKN8 68 aa8.01□□□□□ -1.13
PTPRK-208ENST00000392449 C21orf62-AS1Q17RA5 79 aa8.01□□□□□ -1.13
PTPRK-208ENST00000392449 LYRM7Q5U5X0 104 aa8.01□□□□□ -1.13
PTPRK-208ENST00000392449 LOC110117498A0A087WWA1 95 aa8□□□□□ -1.13
PTPRK-208ENST00000392449 KRTAP4-9Q9BYQ8 210 aa8□□□□□ -1.13
PTPRK-208ENST00000392449 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
PTPRK-208ENST00000392449 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
PTPRK-208ENST00000392449 Q6ZVQ6 151 aa7.98□□□□□ -1.13
PTPRK-208ENST00000392449 M0R143 59 aa7.96□□□□□ -1.13
PTPRK-208ENST00000392449 MACF1Q9UPN3 7388 aaKnown RBP7.95□□□□□ -1.14
PTPRK-208ENST00000392449 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
PTPRK-208ENST00000392449 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
PTPRK-208ENST00000392449 MMP24-AS1A0A0U1RRL7 71 aa7.93□□□□□ -1.14
PTPRK-208ENST00000392449 A0A1B0GW54 56 aa7.93□□□□□ -1.14
PTPRK-208ENST00000392449 PDE6GP18545 87 aa7.92□□□□□ -1.14
PTPRK-208ENST00000392449 NREPQ16612 68 aa7.91□□□□□ -1.14
PTPRK-208ENST00000392449 SYNE2Q8WXH0 6885 aaKnown RBP7.89□□□□□ -1.15
PTPRK-208ENST00000392449 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
PTPRK-208ENST00000392449 K7EQZ3 153 aa7.87□□□□□ -1.15
PTPRK-208ENST00000392449 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
PTPRK-208ENST00000392449 BATFQ16520 125 aa7.86□□□□□ -1.15
PTPRK-208ENST00000392449 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
PTPRK-208ENST00000392449 NDUFS5O43920 106 aa7.85□□□□□ -1.15
PTPRK-208ENST00000392449 hDV103S1A0JD37 113 aa7.84□□□□□ -1.15
PTPRK-208ENST00000392449 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
PTPRK-208ENST00000392449 IGKV2D-30A0A075B6S6 120 aa7.81□□□□□ -1.16
PTPRK-208ENST00000392449 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
PTPRK-208ENST00000392449 KRTAP4-2Q9BYR5 136 aa7.81□□□□□ -1.16
PTPRK-208ENST00000392449 Q5W150 140 aa7.8□□□□□ -1.16
PTPRK-208ENST00000392449 Q8N9L7 120 aa7.77□□□□□ -1.17
PTPRK-208ENST00000392449 BPY2O14599 106 aa7.76□□□□□ -1.17
PTPRK-208ENST00000392449 H3BT86 120 aa7.75□□□□□ -1.17
PTPRK-208ENST00000392449 LINC00846Q9NV44 126 aa7.75□□□□□ -1.17
PTPRK-208ENST00000392449 C9orf118A6NHY6 69 aa7.74□□□□□ -1.17
PTPRK-208ENST00000392449 KRTAP4-11Q9BYQ6 195 aa7.74□□□□□ -1.17
PTPRK-208ENST00000392449 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
PTPRK-208ENST00000392449 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
PTPRK-208ENST00000392449 A0A1W2PPM0 123 aa7.72□□□□□ -1.17
PTPRK-208ENST00000392449 LCE5AQ5TCM9 118 aa7.71□□□□□ -1.18
PTPRK-208ENST00000392449 C4orf26Q17RF5 130 aa7.7□□□□□ -1.18
PTPRK-208ENST00000392449 HCG22E2RYF7 251 aa7.69□□□□□ -1.18
PTPRK-208ENST00000392449 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
PTPRK-208ENST00000392449 A0A1B0GV90 55 aa7.63□□□□□ -1.19
PTPRK-208ENST00000392449 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
PTPRK-208ENST00000392449 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
PTPRK-208ENST00000392449 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
PTPRK-208ENST00000392449 CXCL6P80162 114 aa7.59□□□□□ -1.19
PTPRK-208ENST00000392449 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
PTPRK-208ENST00000392449 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
PTPRK-208ENST00000392449 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
PTPRK-208ENST00000392449 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
PTPRK-208ENST00000392449 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
PTPRK-208ENST00000392449 S4R3F8 94 aa7.52□□□□□ -1.21
PTPRK-208ENST00000392449 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
PTPRK-208ENST00000392449 MT1BP07438 61 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms