RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
TRBV4-1-201ENST00000390357 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
TRBV4-1-201ENST00000390357 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
TRBV4-1-201ENST00000390357 BAALC-AS2P0C853 105 aa6.86□□□□□ -1.31
TRBV4-1-201ENST00000390357 VPS25Q9BRG1 176 aa6.86□□□□□ -1.31
TRBV4-1-201ENST00000390357 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
TRBV4-1-201ENST00000390357 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
TRBV4-1-201ENST00000390357 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
TRBV4-1-201ENST00000390357 NDUFB1O75438 58 aa6.84□□□□□ -1.31
TRBV4-1-201ENST00000390357 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
TRBV4-1-201ENST00000390357 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
TRBV4-1-201ENST00000390357 Q6ZQT0 140 aa6.82□□□□□ -1.32
TRBV4-1-201ENST00000390357 HRES1P13985 223 aa6.81□□□□□ -1.32
TRBV4-1-201ENST00000390357 PDE6GP18545 87 aa6.81□□□□□ -1.32
TRBV4-1-201ENST00000390357 M0R143 59 aa6.8□□□□□ -1.32
TRBV4-1-201ENST00000390357 ATXN8Q156A1 80 aa6.8□□□□□ -1.32
TRBV4-1-201ENST00000390357 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
TRBV4-1-201ENST00000390357 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
TRBV4-1-201ENST00000390357 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
TRBV4-1-201ENST00000390357 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
TRBV4-1-201ENST00000390357 A8MWP4 228 aa6.74□□□□□ -1.33
TRBV4-1-201ENST00000390357 SPINK7P58062 85 aa6.74□□□□□ -1.33
TRBV4-1-201ENST00000390357 LYRM7Q5U5X0 104 aa6.74□□□□□ -1.33
TRBV4-1-201ENST00000390357 TSTD3H0UI37 97 aa6.73□□□□□ -1.33
TRBV4-1-201ENST00000390357 MT2AP02795 61 aa6.71□□□□□ -1.34
TRBV4-1-201ENST00000390357 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.34
TRBV4-1-201ENST00000390357 NREPQ16612 68 aa6.69□□□□□ -1.34
TRBV4-1-201ENST00000390357 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
TRBV4-1-201ENST00000390357 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
TRBV4-1-201ENST00000390357 Q6ZVQ6 151 aa6.67□□□□□ -1.34
TRBV4-1-201ENST00000390357 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
TRBV4-1-201ENST00000390357 BATFQ16520 125 aa6.66□□□□□ -1.34
TRBV4-1-201ENST00000390357 C14orf132Q9NPU4 83 aa6.66□□□□□ -1.34
TRBV4-1-201ENST00000390357 MT1FP04733 61 aa6.65□□□□□ -1.34
TRBV4-1-201ENST00000390357 NAA38Q9BRA0 125 aaKnown RBP6.65□□□□□ -1.34
TRBV4-1-201ENST00000390357 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
TRBV4-1-201ENST00000390357 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
TRBV4-1-201ENST00000390357 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
TRBV4-1-201ENST00000390357 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
TRBV4-1-201ENST00000390357 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
TRBV4-1-201ENST00000390357 H3BT86 120 aa6.6□□□□□ -1.35
TRBV4-1-201ENST00000390357 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
TRBV4-1-201ENST00000390357 LCE2BO14633 110 aa6.59□□□□□ -1.35
TRBV4-1-201ENST00000390357 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
TRBV4-1-201ENST00000390357 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
TRBV4-1-201ENST00000390357 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
TRBV4-1-201ENST00000390357 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
TRBV4-1-201ENST00000390357 BPY2O14599 106 aa6.55□□□□□ -1.36
TRBV4-1-201ENST00000390357 NDUFS5O43920 106 aa6.54□□□□□ -1.36
TRBV4-1-201ENST00000390357 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
TRBV4-1-201ENST00000390357 K7EQZ3 153 aa6.53□□□□□ -1.36
TRBV4-1-201ENST00000390357 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
TRBV4-1-201ENST00000390357 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
TRBV4-1-201ENST00000390357 A0A1W2PPM0 123 aa6.52□□□□□ -1.37
TRBV4-1-201ENST00000390357 USH2AO75445 5202 aa6.51□□□□□ -1.37
TRBV4-1-201ENST00000390357 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
TRBV4-1-201ENST00000390357 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
TRBV4-1-201ENST00000390357 COL5A1-AS1Q5SY13 56 aa6.46□□□□□ -1.38
TRBV4-1-201ENST00000390357 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
TRBV4-1-201ENST00000390357 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
TRBV4-1-201ENST00000390357 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
TRBV4-1-201ENST00000390357 CXCL6P80162 114 aa6.44□□□□□ -1.38
TRBV4-1-201ENST00000390357 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
TRBV4-1-201ENST00000390357 Q5W150 140 aa6.44□□□□□ -1.38
TRBV4-1-201ENST00000390357 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
TRBV4-1-201ENST00000390357 PCP4L1A6NKN8 68 aa6.42□□□□□ -1.38
TRBV4-1-201ENST00000390357 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
TRBV4-1-201ENST00000390357 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
TRBV4-1-201ENST00000390357 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
TRBV4-1-201ENST00000390357 Q8N9L7 120 aa6.37□□□□□ -1.39
TRBV4-1-201ENST00000390357 K7EP34 96 aa6.35□□□□□ -1.39
TRBV4-1-201ENST00000390357 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
TRBV4-1-201ENST00000390357 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
TRBV4-1-201ENST00000390357 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
TRBV4-1-201ENST00000390357 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
TRBV4-1-201ENST00000390357 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
TRBV4-1-201ENST00000390357 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
TRBV4-1-201ENST00000390357 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
TRBV4-1-201ENST00000390357 F8W1H4 67 aa6.25□□□□□ -1.41
TRBV4-1-201ENST00000390357 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
TRBV4-1-201ENST00000390357 S4R3F8 94 aa6.25□□□□□ -1.41
TRBV4-1-201ENST00000390357 FAM236AA0A1B0GUQ0 79 aa6.24□□□□□ -1.41
TRBV4-1-201ENST00000390357 FAM236BA0A1B0GV22 79 aa6.24□□□□□ -1.41
TRBV4-1-201ENST00000390357 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
TRBV4-1-201ENST00000390357 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
TRBV4-1-201ENST00000390357 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
TRBV4-1-201ENST00000390357 LCA10Q71F78 164 aa6.19□□□□□ -1.42
TRBV4-1-201ENST00000390357 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
TRBV4-1-201ENST00000390357 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
TRBV4-1-201ENST00000390357 Q5VV11 94 aa6.15□□□□□ -1.42
TRBV4-1-201ENST00000390357 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
TRBV4-1-201ENST00000390357 ACYP1P07311 99 aa6.14□□□□□ -1.43
TRBV4-1-201ENST00000390357 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
TRBV4-1-201ENST00000390357 A6NN06 94 aa6.12□□□□□ -1.43
TRBV4-1-201ENST00000390357 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
TRBV4-1-201ENST00000390357 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
TRBV4-1-201ENST00000390357 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
TRBV4-1-201ENST00000390357 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
TRBV4-1-201ENST00000390357 MT1BP07438 61 aa6.09□□□□□ -1.43
TRBV4-1-201ENST00000390357 A0A1B0GV90 55 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms