RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 CELSR2Q9HCU4 2923 aa13□□□□□ -0.33
LRIG1-202ENST00000383703 M0R2T5 61 aa13□□□□□ -0.33
LRIG1-202ENST00000383703 FLG2Q5D862 2391 aaPredicted RBP12.99□□□□□ -0.33
LRIG1-202ENST00000383703 USP34Q70CQ2 3546 aa12.99□□□□□ -0.33
LRIG1-202ENST00000383703 HRNRQ86YZ3 2850 aaPredicted RBP12.95□□□□□ -0.34
LRIG1-202ENST00000383703 R4GN34 69 aa12.93□□□□□ -0.34
LRIG1-202ENST00000383703 H1FX-AS1Q4G0G2 97 aa12.9□□□□□ -0.34
LRIG1-202ENST00000383703 KRTAP13-2Q52LG2 175 aa12.88□□□□□ -0.35
LRIG1-202ENST00000383703 RPL37P61927 97 aaKnown RBP12.87□□□□□ -0.35
LRIG1-202ENST00000383703 LOC400499M0QZD8 3231 aa12.86□□□□□ -0.35
LRIG1-202ENST00000383703 RPS29P62273 56 aaKnown RBP12.86□□□□□ -0.35
LRIG1-202ENST00000383703 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
LRIG1-202ENST00000383703 LUZP6Q538Z0 58 aa12.83□□□□□ -0.36
LRIG1-202ENST00000383703 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
LRIG1-202ENST00000383703 CRYBG3Q68DQ2 2970 aa12.79□□□□□ -0.36
LRIG1-202ENST00000383703 SPATA8Q6RVD6 105 aa12.75□□□□□ -0.37
LRIG1-202ENST00000383703 ROMO1P60602 79 aa12.73□□□□□ -0.37
LRIG1-202ENST00000383703 M0QZ58 72 aa12.72□□□□□ -0.37
LRIG1-202ENST00000383703 FBN2P35556 2912 aa12.7□□□□□ -0.38
LRIG1-202ENST00000383703 ADM2Q7Z4H4 148 aa12.69□□□□□ -0.38
LRIG1-202ENST00000383703 NF1P21359 2839 aa12.67□□□□□ -0.38
LRIG1-202ENST00000383703 MYO15AQ9UKN7 3530 aa12.62□□□□□ -0.39
LRIG1-202ENST00000383703 KRTAP21-3Q3LHN1 58 aa12.51□□□□□ -0.41
LRIG1-202ENST00000383703 A6NN06 94 aa12.46□□□□□ -0.42
LRIG1-202ENST00000383703 A8MU10 97 aa12.44□□□□□ -0.42
LRIG1-202ENST00000383703 MXRA5Q9NR99 2828 aa12.4□□□□□ -0.43
LRIG1-202ENST00000383703 A8MUU9 505 aa12.38□□□□□ -0.43
LRIG1-202ENST00000383703 KRTAP1-4P0C5Y4 121 aa12.35□□□□□ -0.43
LRIG1-202ENST00000383703 C20orf166-AS1Q96NR2 134 aa12.34□□□□□ -0.43
LRIG1-202ENST00000383703 RELNP78509 3460 aa12.3□□□□□ -0.44
LRIG1-202ENST00000383703 PLAC4Q8WY50 150 aa12.29□□□□□ -0.44
LRIG1-202ENST00000383703 H3BS24 57 aa12.27□□□□□ -0.44
LRIG1-202ENST00000383703 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
LRIG1-202ENST00000383703 KRTAP25-1Q3LHN0 102 aa12.21□□□□□ -0.45
LRIG1-202ENST00000383703 TENM3Q9P273 2699 aa12.19□□□□□ -0.46
LRIG1-202ENST00000383703 WDFY3Q8IZQ1 3526 aa12.18□□□□□ -0.46
LRIG1-202ENST00000383703 TENM1Q9UKZ4 2725 aa12.14□□□□□ -0.47
LRIG1-202ENST00000383703 A0A0A0MQY5 61 aa12.13□□□□□ -0.47
LRIG1-202ENST00000383703 DCHS1Q96JQ0 3298 aa12.11□□□□□ -0.47
LRIG1-202ENST00000383703 XP32Q5T750 250 aa12.05□□□□□ -0.48
LRIG1-202ENST00000383703 LAMA5O15230 3695 aa12.02□□□□□ -0.48
LRIG1-202ENST00000383703 KRTAP16-1A8MUX0 517 aa12.02□□□□□ -0.49
LRIG1-202ENST00000383703 TENM2Q9NT68 2774 aa12□□□□□ -0.49
LRIG1-202ENST00000383703 ZFHX4Q86UP3 3567 aa12□□□□□ -0.49
LRIG1-202ENST00000383703 ASPMQ8IZT6 3477 aa11.97□□□□□ -0.49
LRIG1-202ENST00000383703 PDZD2O15018 2839 aa11.95□□□□□ -0.5
LRIG1-202ENST00000383703 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
LRIG1-202ENST00000383703 DMDP11532 3685 aa11.8□□□□□ -0.52
LRIG1-202ENST00000383703 TGP01266 2768 aa11.8□□□□□ -0.52
LRIG1-202ENST00000383703 H0YAA0 97 aa11.78□□□□□ -0.52
LRIG1-202ENST00000383703 TPRXLQ17RH7 258 aa11.77□□□□□ -0.53
LRIG1-202ENST00000383703 TNP1P09430 55 aa11.74□□□□□ -0.53
LRIG1-202ENST00000383703 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
LRIG1-202ENST00000383703 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
LRIG1-202ENST00000383703 CSMD1Q96PZ7 3565 aa11.69□□□□□ -0.54
LRIG1-202ENST00000383703 OTOGQ6ZRI0 2925 aa11.65□□□□□ -0.54
LRIG1-202ENST00000383703 FBN1P35555 2871 aaKnown RBP11.65□□□□□ -0.54
LRIG1-202ENST00000383703 VWFP04275 2813 aa11.65□□□□□ -0.54
LRIG1-202ENST00000383703 SMG1Q96Q15 3661 aaKnown RBP11.65□□□□□ -0.55
LRIG1-202ENST00000383703 NBPF19A0A087WUL8 3843 aa11.64□□□□□ -0.55
LRIG1-202ENST00000383703 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
LRIG1-202ENST00000383703 NDUFAF8A1L188 74 aa11.62□□□□□ -0.55
LRIG1-202ENST00000383703 C10orf95Q9H7T3 257 aa11.58□□□□□ -0.56
LRIG1-202ENST00000383703 KRTAP10-8P60410 259 aa11.56□□□□□ -0.56
LRIG1-202ENST00000383703 P0C880 135 aa11.52□□□□□ -0.57
LRIG1-202ENST00000383703 PP632Q6XCG6 107 aa11.46□□□□□ -0.58
LRIG1-202ENST00000383703 ANK3Q12955 4377 aaKnown RBP11.4□□□□□ -0.58
LRIG1-202ENST00000383703 SVEP1Q4LDE5 3571 aa11.37□□□□□ -0.59
LRIG1-202ENST00000383703 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
LRIG1-202ENST00000383703 KRTAP10-10P60014 251 aa11.26□□□□□ -0.61
LRIG1-202ENST00000383703 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
LRIG1-202ENST00000383703 CSMD2Q7Z408 3487 aa11.2□□□□□ -0.62
LRIG1-202ENST00000383703 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
LRIG1-202ENST00000383703 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
LRIG1-202ENST00000383703 CUBNO60494 3623 aa11.09□□□□□ -0.63
LRIG1-202ENST00000383703 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
LRIG1-202ENST00000383703 KRTAP12-2P59991 146 aa11.07□□□□□ -0.64
LRIG1-202ENST00000383703 SRRM2Q9UQ35 2752 aaKnown RBP11.04□□□□□ -0.64
LRIG1-202ENST00000383703 BSNQ9UPA5 3926 aa11.01□□□□□ -0.65
LRIG1-202ENST00000383703 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
LRIG1-202ENST00000383703 PRO2289Q9P1D8 64 aa10.96□□□□□ -0.66
LRIG1-202ENST00000383703 KRTAP12-1P59990 96 aa10.91□□□□□ -0.66
LRIG1-202ENST00000383703 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
LRIG1-202ENST00000383703 KRTAP13-4Q3LI77 160 aa10.77□□□□□ -0.68
LRIG1-202ENST00000383703 KRTAP10-6P60371 365 aaPredicted RBP10.75□□□□□ -0.69
LRIG1-202ENST00000383703 HUWE1Q7Z6Z7 4374 aaKnown RBP10.69□□□□□ -0.7
LRIG1-202ENST00000383703 MT1HL1P0DM35 61 aa10.67□□□□□ -0.7
LRIG1-202ENST00000383703 VPS13CQ709C8 3753 aa10.58□□□□□ -0.72
LRIG1-202ENST00000383703 KRTAP10-4P60372 401 aaPredicted RBP10.56□□□□□ -0.72
LRIG1-202ENST00000383703 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
LRIG1-202ENST00000383703 KRTAP3-2Q9BYR7 98 aa10.42□□□□□ -0.74
LRIG1-202ENST00000383703 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
LRIG1-202ENST00000383703 DNAH9Q9NYC9 4486 aa10.2□□□□□ -0.78
LRIG1-202ENST00000383703 ZNF469Q96JG9 3925 aaPredicted RBP10.2□□□□□ -0.78
LRIG1-202ENST00000383703 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
LRIG1-202ENST00000383703 KRTAP15-1Q3LI76 137 aa10.13□□□□□ -0.79
LRIG1-202ENST00000383703 CSMD3Q7Z407 3707 aa10.09□□□□□ -0.79
LRIG1-202ENST00000383703 AKAP9Q99996 3911 aa10.08□□□□□ -0.8
LRIG1-202ENST00000383703 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.8
LRIG1-202ENST00000383703 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms