RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 C1orf195Q5TG92 126 aa4.57□□□□□ -1.68
ERCC8-202ENST00000381118 SPAG11AQ6PDA7 123 aa4.57□□□□□ -1.68
ERCC8-202ENST00000381118 IGHV6-1A0A0B4J1U7 121 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 NDUFB1O75438 58 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 PRR15Q8IV56 129 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 Q5XG85 94 aa4.56□□□□□ -1.68
ERCC8-202ENST00000381118 HERC2O95714 4834 aa4.55□□□□□ -1.68
ERCC8-202ENST00000381118 HCG22E2RYF7 251 aa4.54□□□□□ -1.68
ERCC8-202ENST00000381118 PCP4P48539 62 aa4.54□□□□□ -1.68
ERCC8-202ENST00000381118 KRTAP10-8P60410 259 aa4.54□□□□□ -1.68
ERCC8-202ENST00000381118 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
ERCC8-202ENST00000381118 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
ERCC8-202ENST00000381118 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
ERCC8-202ENST00000381118 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
ERCC8-202ENST00000381118 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
ERCC8-202ENST00000381118 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
ERCC8-202ENST00000381118 ATOX1O00244 68 aa4.52□□□□□ -1.69
ERCC8-202ENST00000381118 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
ERCC8-202ENST00000381118 CASC2Q6XLA1 102 aa4.52□□□□□ -1.69
ERCC8-202ENST00000381118 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
ERCC8-202ENST00000381118 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
ERCC8-202ENST00000381118 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
ERCC8-202ENST00000381118 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
ERCC8-202ENST00000381118 LINC00313P59037 77 aa4.48□□□□□ -1.69
ERCC8-202ENST00000381118 OXTP01178 125 aa4.48□□□□□ -1.69
ERCC8-202ENST00000381118 NDUFS5O43920 106 aa4.47□□□□□ -1.69
ERCC8-202ENST00000381118 SERP2Q8N6R1 65 aa4.46□□□□□ -1.69
ERCC8-202ENST00000381118 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
ERCC8-202ENST00000381118 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.7
ERCC8-202ENST00000381118 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
ERCC8-202ENST00000381118 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
ERCC8-202ENST00000381118 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
ERCC8-202ENST00000381118 TRAV7A0A075B6U4 112 aa4.45□□□□□ -1.7
ERCC8-202ENST00000381118 COX7CP15954 63 aa4.45□□□□□ -1.7
ERCC8-202ENST00000381118 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
ERCC8-202ENST00000381118 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
ERCC8-202ENST00000381118 PCLOQ9Y6V0 5065 aa4.43□□□□□ -1.7
ERCC8-202ENST00000381118 UQCRQO14949 82 aa4.43□□□□□ -1.7
ERCC8-202ENST00000381118 H3BS24 57 aa4.42□□□□□ -1.7
ERCC8-202ENST00000381118 KRTAP16-1A8MUX0 517 aa4.42□□□□□ -1.7
ERCC8-202ENST00000381118 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
ERCC8-202ENST00000381118 C20orf197Q8N268 126 aa4.41□□□□□ -1.7
ERCC8-202ENST00000381118 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
ERCC8-202ENST00000381118 PRR4Q16378 134 aa4.41□□□□□ -1.7
ERCC8-202ENST00000381118 SNURFQ9Y675 71 aa4.4□□□□□ -1.7
ERCC8-202ENST00000381118 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
ERCC8-202ENST00000381118 LPAP08519 4548 aa4.39□□□□□ -1.71
ERCC8-202ENST00000381118 FP248Q71RG6 208 aaPredicted RBP4.39□□□□□ -1.71
ERCC8-202ENST00000381118 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
ERCC8-202ENST00000381118 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
ERCC8-202ENST00000381118 TP53AIP1Q9HCN2 124 aa4.38□□□□□ -1.71
ERCC8-202ENST00000381118 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
ERCC8-202ENST00000381118 H0Y9P7 68 aa4.38□□□□□ -1.71
ERCC8-202ENST00000381118 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
ERCC8-202ENST00000381118 MP68P56378 58 aa4.37□□□□□ -1.71
ERCC8-202ENST00000381118 Q5W150 140 aa4.37□□□□□ -1.71
ERCC8-202ENST00000381118 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
ERCC8-202ENST00000381118 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
ERCC8-202ENST00000381118 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
ERCC8-202ENST00000381118 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
ERCC8-202ENST00000381118 HERC1Q15751 4861 aa4.34□□□□□ -1.71
ERCC8-202ENST00000381118 LRP2P98164 4655 aa4.33□□□□□ -1.72
ERCC8-202ENST00000381118 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
ERCC8-202ENST00000381118 C20orf166-AS1Q96NR2 134 aa4.33□□□□□ -1.72
ERCC8-202ENST00000381118 A8MUU9 505 aa4.32□□□□□ -1.72
ERCC8-202ENST00000381118 XP32Q5T750 250 aa4.32□□□□□ -1.72
ERCC8-202ENST00000381118 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
ERCC8-202ENST00000381118 H7BZZ5 65 aa4.3□□□□□ -1.72
ERCC8-202ENST00000381118 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
ERCC8-202ENST00000381118 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
ERCC8-202ENST00000381118 Q75L30 129 aa4.3□□□□□ -1.72
ERCC8-202ENST00000381118 H3BPC8 53 aa4.29□□□□□ -1.72
ERCC8-202ENST00000381118 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
ERCC8-202ENST00000381118 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
ERCC8-202ENST00000381118 LOC101927531A0A1B0GV80 90 aa4.27□□□□□ -1.73
ERCC8-202ENST00000381118 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
ERCC8-202ENST00000381118 NDUFC1O43677 76 aa4.27□□□□□ -1.73
ERCC8-202ENST00000381118 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
ERCC8-202ENST00000381118 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
ERCC8-202ENST00000381118 TMEM258P61165 79 aa4.25□□□□□ -1.73
ERCC8-202ENST00000381118 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
ERCC8-202ENST00000381118 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
ERCC8-202ENST00000381118 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
ERCC8-202ENST00000381118 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
ERCC8-202ENST00000381118 SPINK7P58062 85 aa4.21□□□□□ -1.74
ERCC8-202ENST00000381118 HRES1P13985 223 aa4.21□□□□□ -1.74
ERCC8-202ENST00000381118 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
ERCC8-202ENST00000381118 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
ERCC8-202ENST00000381118 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
ERCC8-202ENST00000381118 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
ERCC8-202ENST00000381118 MUC2Q02817 5179 aa4.14□□□□□ -1.75
ERCC8-202ENST00000381118 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
ERCC8-202ENST00000381118 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
ERCC8-202ENST00000381118 SERP1Q9Y6X1 66 aa4.11□□□□□ -1.75
ERCC8-202ENST00000381118 ACYP2P14621 99 aa4.1□□□□□ -1.75
ERCC8-202ENST00000381118 COA5Q86WW8 74 aa4.1□□□□□ -1.75
ERCC8-202ENST00000381118 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
ERCC8-202ENST00000381118 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms