RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 OXTP01178 125 aa6.67□□□□□ -1.34
RAD50-201ENST00000378823 MYO15AQ9UKN7 3530 aa6.66□□□□□ -1.34
RAD50-201ENST00000378823 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
RAD50-201ENST00000378823 Q5VSD8 79 aa6.64□□□□□ -1.35
RAD50-201ENST00000378823 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
RAD50-201ENST00000378823 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
RAD50-201ENST00000378823 KRTAP1-5Q9BYS1 174 aa6.64□□□□□ -1.35
RAD50-201ENST00000378823 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
RAD50-201ENST00000378823 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
RAD50-201ENST00000378823 PANO1I0J062 215 aa6.6□□□□□ -1.35
RAD50-201ENST00000378823 ZANQ9Y493 2812 aa6.59□□□□□ -1.35
RAD50-201ENST00000378823 FBN2P35556 2912 aa6.59□□□□□ -1.35
RAD50-201ENST00000378823 ASPMQ8IZT6 3477 aa6.58□□□□□ -1.36
RAD50-201ENST00000378823 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
RAD50-201ENST00000378823 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
RAD50-201ENST00000378823 KRTAP10-1P60331 282 aa6.56□□□□□ -1.36
RAD50-201ENST00000378823 LOC400499M0QZD8 3231 aa6.56□□□□□ -1.36
RAD50-201ENST00000378823 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
RAD50-201ENST00000378823 KRTAP10-2P60368 255 aa6.54□□□□□ -1.36
RAD50-201ENST00000378823 PDZD2O15018 2839 aa6.53□□□□□ -1.36
RAD50-201ENST00000378823 A0A087X002 238 aa6.51□□□□□ -1.37
RAD50-201ENST00000378823 LAMA5O15230 3695 aa6.5□□□□□ -1.37
RAD50-201ENST00000378823 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
RAD50-201ENST00000378823 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
RAD50-201ENST00000378823 LCE6AA0A183 80 aa6.47□□□□□ -1.37
RAD50-201ENST00000378823 A8MUU9 505 aa6.44□□□□□ -1.38
RAD50-201ENST00000378823 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
RAD50-201ENST00000378823 C20orf166-AS1Q96NR2 134 aa6.43□□□□□ -1.38
RAD50-201ENST00000378823 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
RAD50-201ENST00000378823 A6NN06 94 aa6.42□□□□□ -1.38
RAD50-201ENST00000378823 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
RAD50-201ENST00000378823 TGP01266 2768 aa6.4□□□□□ -1.38
RAD50-201ENST00000378823 TENM4Q6N022 2769 aa6.38□□□□□ -1.39
RAD50-201ENST00000378823 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
RAD50-201ENST00000378823 A8MU10 97 aa6.38□□□□□ -1.39
RAD50-201ENST00000378823 PKD1L1Q8TDX9 2849 aa6.36□□□□□ -1.39
RAD50-201ENST00000378823 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
RAD50-201ENST00000378823 HRNRQ86YZ3 2850 aaPredicted RBP6.35□□□□□ -1.39
RAD50-201ENST00000378823 ZFHX4Q86UP3 3567 aa6.35□□□□□ -1.39
RAD50-201ENST00000378823 VWFP04275 2813 aa6.34□□□□□ -1.39
RAD50-201ENST00000378823 MXRA5Q9NR99 2828 aa6.33□□□□□ -1.4
RAD50-201ENST00000378823 RELNP78509 3460 aa6.33□□□□□ -1.4
RAD50-201ENST00000378823 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
RAD50-201ENST00000378823 TNP1P09430 55 aa6.28□□□□□ -1.4
RAD50-201ENST00000378823 CSMD1Q96PZ7 3565 aa6.28□□□□□ -1.4
RAD50-201ENST00000378823 SPENQ96T58 3664 aaKnown RBP6.25□□□□□ -1.41
RAD50-201ENST00000378823 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
RAD50-201ENST00000378823 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
RAD50-201ENST00000378823 SMG1Q96Q15 3661 aaKnown RBP6.22□□□□□ -1.41
RAD50-201ENST00000378823 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.41
RAD50-201ENST00000378823 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.42
RAD50-201ENST00000378823 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
RAD50-201ENST00000378823 ZFHX3Q15911 3703 aa6.19□□□□□ -1.42
RAD50-201ENST00000378823 DMDP11532 3685 aa6.17□□□□□ -1.42
RAD50-201ENST00000378823 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
RAD50-201ENST00000378823 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
RAD50-201ENST00000378823 CUBNO60494 3623 aa6.12□□□□□ -1.43
RAD50-201ENST00000378823 COL7A1Q02388 2944 aa6.11□□□□□ -1.43
RAD50-201ENST00000378823 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
RAD50-201ENST00000378823 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
RAD50-201ENST00000378823 SVEP1Q4LDE5 3571 aa6.01□□□□□ -1.45
RAD50-201ENST00000378823 H0YAA0 97 aa6.01□□□□□ -1.45
RAD50-201ENST00000378823 P0C880 135 aa5.96□□□□□ -1.46
RAD50-201ENST00000378823 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
RAD50-201ENST00000378823 XP32Q5T750 250 aa5.94□□□□□ -1.46
RAD50-201ENST00000378823 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
RAD50-201ENST00000378823 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
RAD50-201ENST00000378823 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
RAD50-201ENST00000378823 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
RAD50-201ENST00000378823 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
RAD50-201ENST00000378823 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
RAD50-201ENST00000378823 KRTAP21-3Q3LHN1 58 aa5.83□□□□□ -1.48
RAD50-201ENST00000378823 MUC3AQ02505 3323 aa5.82□□□□□ -1.48
RAD50-201ENST00000378823 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
RAD50-201ENST00000378823 TRRAPQ9Y4A5 3859 aa5.81□□□□□ -1.48
RAD50-201ENST00000378823 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
RAD50-201ENST00000378823 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
RAD50-201ENST00000378823 CSMD2Q7Z408 3487 aa5.72□□□□□ -1.49
RAD50-201ENST00000378823 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
RAD50-201ENST00000378823 BSNQ9UPA5 3926 aa5.65□□□□□ -1.5
RAD50-201ENST00000378823 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.51
RAD50-201ENST00000378823 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
RAD50-201ENST00000378823 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
RAD50-201ENST00000378823 AKAP9Q99996 3911 aa5.57□□□□□ -1.52
RAD50-201ENST00000378823 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
RAD50-201ENST00000378823 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
RAD50-201ENST00000378823 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
RAD50-201ENST00000378823 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
RAD50-201ENST00000378823 INE1O15225 51 aa5.24□□□□□ -1.57
RAD50-201ENST00000378823 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
RAD50-201ENST00000378823 ANK3Q12955 4377 aaKnown RBP5.14□□□□□ -1.59
RAD50-201ENST00000378823 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
RAD50-201ENST00000378823 LYSTQ99698 3801 aa5.04□□□□□ -1.6
RAD50-201ENST00000378823 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
RAD50-201ENST00000378823 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
RAD50-201ENST00000378823 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
RAD50-201ENST00000378823 HUWE1Q7Z6Z7 4374 aaKnown RBP4.94□□□□□ -1.62
RAD50-201ENST00000378823 ALMS1Q8TCU4 4167 aa4.93□□□□□ -1.62
RAD50-201ENST00000378823 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
RAD50-201ENST00000378823 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms