RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 LCE6AA0A183 80 aa8.75□□□□□ -1.01
EXT1-201ENST00000378204 COL6A3P12111 3177 aa8.75□□□□□ -1.01
EXT1-201ENST00000378204 VCANP13611 3396 aa8.75□□□□□ -1.01
EXT1-201ENST00000378204 A8MUU9 505 aa8.74□□□□□ -1.01
EXT1-201ENST00000378204 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
EXT1-201ENST00000378204 ZZEF1O43149 2961 aa8.72□□□□□ -1.01
EXT1-201ENST00000378204 A8MU10 97 aa8.71□□□□□ -1.01
EXT1-201ENST00000378204 ATMQ13315 3056 aa8.68□□□□□ -1.02
EXT1-201ENST00000378204 CFAP47Q6ZTR5 3102 aa8.66□□□□□ -1.02
EXT1-201ENST00000378204 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
EXT1-201ENST00000378204 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.03
EXT1-201ENST00000378204 SPEGQ15772 3267 aa8.57□□□□□ -1.04
EXT1-201ENST00000378204 DCHS2Q6V1P9 2916 aa8.55□□□□□ -1.04
EXT1-201ENST00000378204 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
EXT1-201ENST00000378204 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
EXT1-201ENST00000378204 USP34Q70CQ2 3546 aa8.53□□□□□ -1.04
EXT1-201ENST00000378204 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
EXT1-201ENST00000378204 NF1P21359 2839 aa8.52□□□□□ -1.04
EXT1-201ENST00000378204 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.05
EXT1-201ENST00000378204 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
EXT1-201ENST00000378204 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.05
EXT1-201ENST00000378204 ZANQ9Y493 2812 aa8.46□□□□□ -1.05
EXT1-201ENST00000378204 DMXL1Q9Y485 3027 aa8.46□□□□□ -1.06
EXT1-201ENST00000378204 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
EXT1-201ENST00000378204 EYSQ5T1H1 3165 aa8.46□□□□□ -1.06
EXT1-201ENST00000378204 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
EXT1-201ENST00000378204 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
EXT1-201ENST00000378204 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
EXT1-201ENST00000378204 FBN2P35556 2912 aa8.36□□□□□ -1.07
EXT1-201ENST00000378204 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
EXT1-201ENST00000378204 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
EXT1-201ENST00000378204 P0C880 135 aa8.32□□□□□ -1.08
EXT1-201ENST00000378204 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
EXT1-201ENST00000378204 CELSR1Q9NYQ6 3014 aa8.28□□□□□ -1.08
EXT1-201ENST00000378204 TNP1P09430 55 aa8.28□□□□□ -1.08
EXT1-201ENST00000378204 LOC400499M0QZD8 3231 aa8.18□□□□□ -1.1
EXT1-201ENST00000378204 PDZD2O15018 2839 aa8.15□□□□□ -1.1
EXT1-201ENST00000378204 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
EXT1-201ENST00000378204 PKD1L1Q8TDX9 2849 aa8.13□□□□□ -1.11
EXT1-201ENST00000378204 TGP01266 2768 aa8.13□□□□□ -1.11
EXT1-201ENST00000378204 HRNRQ86YZ3 2850 aaPredicted RBP8.13□□□□□ -1.11
EXT1-201ENST00000378204 SPTBN5Q9NRC6 3674 aaKnown RBP8.11□□□□□ -1.11
EXT1-201ENST00000378204 H0YAA0 97 aa8.1□□□□□ -1.11
EXT1-201ENST00000378204 VWFP04275 2813 aa8.03□□□□□ -1.12
EXT1-201ENST00000378204 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.13
EXT1-201ENST00000378204 MXRA5Q9NR99 2828 aa7.98□□□□□ -1.13
EXT1-201ENST00000378204 WDFY3Q8IZQ1 3526 aa7.97□□□□□ -1.13
EXT1-201ENST00000378204 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
EXT1-201ENST00000378204 XP32Q5T750 250 aa7.9□□□□□ -1.14
EXT1-201ENST00000378204 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
EXT1-201ENST00000378204 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
EXT1-201ENST00000378204 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
EXT1-201ENST00000378204 DCHS1Q96JQ0 3298 aa7.81□□□□□ -1.16
EXT1-201ENST00000378204 ASPMQ8IZT6 3477 aa7.8□□□□□ -1.16
EXT1-201ENST00000378204 NBPF19A0A087WUL8 3843 aa7.76□□□□□ -1.17
EXT1-201ENST00000378204 ZFHX4Q86UP3 3567 aa7.76□□□□□ -1.17
EXT1-201ENST00000378204 SRRM2Q9UQ35 2752 aaKnown RBP7.75□□□□□ -1.17
EXT1-201ENST00000378204 A0A1B0GVY2 172 aa7.75□□□□□ -1.17
EXT1-201ENST00000378204 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.17
EXT1-201ENST00000378204 RELNP78509 3460 aa7.71□□□□□ -1.17
EXT1-201ENST00000378204 INE1O15225 51 aa7.68□□□□□ -1.18
EXT1-201ENST00000378204 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
EXT1-201ENST00000378204 COL7A1Q02388 2944 aa7.64□□□□□ -1.19
EXT1-201ENST00000378204 LAMA5O15230 3695 aa7.63□□□□□ -1.19
EXT1-201ENST00000378204 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
EXT1-201ENST00000378204 ZFHX3Q15911 3703 aa7.61□□□□□ -1.19
EXT1-201ENST00000378204 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
EXT1-201ENST00000378204 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
EXT1-201ENST00000378204 MEGF8Q7Z7M0 2845 aa7.5□□□□□ -1.21
EXT1-201ENST00000378204 FBN3Q75N90 2809 aa7.48□□□□□ -1.21
EXT1-201ENST00000378204 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
EXT1-201ENST00000378204 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
EXT1-201ENST00000378204 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
EXT1-201ENST00000378204 CUBNO60494 3623 aa7.33□□□□□ -1.24
EXT1-201ENST00000378204 SMG1Q96Q15 3661 aaKnown RBP7.33□□□□□ -1.24
EXT1-201ENST00000378204 KRTAP12-1P59990 96 aa7.27□□□□□ -1.24
EXT1-201ENST00000378204 SPENQ96T58 3664 aaKnown RBP7.27□□□□□ -1.25
EXT1-201ENST00000378204 DMDP11532 3685 aa7.2□□□□□ -1.26
EXT1-201ENST00000378204 SVEP1Q4LDE5 3571 aa7.19□□□□□ -1.26
EXT1-201ENST00000378204 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
EXT1-201ENST00000378204 TRRAPQ9Y4A5 3859 aa7.17□□□□□ -1.26
EXT1-201ENST00000378204 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
EXT1-201ENST00000378204 MUC3AQ02505 3323 aa7.11□□□□□ -1.27
EXT1-201ENST00000378204 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
EXT1-201ENST00000378204 CSMD2Q7Z408 3487 aa7.01□□□□□ -1.29
EXT1-201ENST00000378204 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
EXT1-201ENST00000378204 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
EXT1-201ENST00000378204 BSNQ9UPA5 3926 aa6.77□□□□□ -1.33
EXT1-201ENST00000378204 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
EXT1-201ENST00000378204 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
EXT1-201ENST00000378204 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
EXT1-201ENST00000378204 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
EXT1-201ENST00000378204 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
EXT1-201ENST00000378204 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
EXT1-201ENST00000378204 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
EXT1-201ENST00000378204 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
EXT1-201ENST00000378204 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
EXT1-201ENST00000378204 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
EXT1-201ENST00000378204 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
EXT1-201ENST00000378204 ZNF469Q96JG9 3925 aaPredicted RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms