RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GCN1Q92616 2671 aaKnown RBP8.69□□□□□ -1.02
RGP1-201ENST00000378078 TRANK1O15050 2925 aa8.69□□□□□ -1.02
RGP1-201ENST00000378078 UNC79Q9P2D8 2635 aa8.69□□□□□ -1.02
RGP1-201ENST00000378078 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
RGP1-201ENST00000378078 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
RGP1-201ENST00000378078 FRYLO94915 3013 aa8.67□□□□□ -1.02
RGP1-201ENST00000378078 ATMQ13315 3056 aa8.65□□□□□ -1.02
RGP1-201ENST00000378078 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.03
RGP1-201ENST00000378078 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
RGP1-201ENST00000378078 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
RGP1-201ENST00000378078 DCHS1Q96JQ0 3298 aa8.61□□□□□ -1.03
RGP1-201ENST00000378078 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
RGP1-201ENST00000378078 DMXL2Q8TDJ6 3036 aa8.57□□□□□ -1.04
RGP1-201ENST00000378078 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
RGP1-201ENST00000378078 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
RGP1-201ENST00000378078 SETXQ7Z333 2677 aaKnown RBP8.55□□□□□ -1.04
RGP1-201ENST00000378078 LAMA5O15230 3695 aa8.52□□□□□ -1.05
RGP1-201ENST00000378078 APCP25054 2843 aa8.52□□□□□ -1.05
RGP1-201ENST00000378078 ASH1LQ9NR48 2969 aaKnown RBP8.51□□□□□ -1.05
RGP1-201ENST00000378078 LOC400499M0QZD8 3231 aa8.5□□□□□ -1.05
RGP1-201ENST00000378078 H0YAA0 97 aa8.5□□□□□ -1.05
RGP1-201ENST00000378078 ZFHX4Q86UP3 3567 aa8.49□□□□□ -1.05
RGP1-201ENST00000378078 ADGRG4Q8IZF6 3080 aa8.49□□□□□ -1.05
RGP1-201ENST00000378078 PP632Q6XCG6 107 aa8.44□□□□□ -1.06
RGP1-201ENST00000378078 ZNF292O60281 2723 aa8.42□□□□□ -1.06
RGP1-201ENST00000378078 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
RGP1-201ENST00000378078 COL12A1Q99715 3063 aa8.41□□□□□ -1.06
RGP1-201ENST00000378078 TACC2O95359 2948 aa8.4□□□□□ -1.06
RGP1-201ENST00000378078 NOTCH1P46531 2555 aa8.4□□□□□ -1.07
RGP1-201ENST00000378078 CSMD1Q96PZ7 3565 aa8.37□□□□□ -1.07
RGP1-201ENST00000378078 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
RGP1-201ENST00000378078 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
RGP1-201ENST00000378078 IGSF10Q6WRI0 2623 aa8.33□□□□□ -1.08
RGP1-201ENST00000378078 DMXL1Q9Y485 3027 aa8.33□□□□□ -1.08
RGP1-201ENST00000378078 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
RGP1-201ENST00000378078 DMDP11532 3685 aa8.32□□□□□ -1.08
RGP1-201ENST00000378078 RELNP78509 3460 aa8.32□□□□□ -1.08
RGP1-201ENST00000378078 KMT2BQ9UMN6 2715 aaPredicted RBP8.32□□□□□ -1.08
RGP1-201ENST00000378078 HIVEP1P15822 2718 aa8.31□□□□□ -1.08
RGP1-201ENST00000378078 UTP20O75691 2785 aaKnown RBP8.28□□□□□ -1.08
RGP1-201ENST00000378078 ZZEF1O43149 2961 aa8.26□□□□□ -1.09
RGP1-201ENST00000378078 KRTAP21-3Q3LHN1 58 aa8.25□□□□□ -1.09
RGP1-201ENST00000378078 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
RGP1-201ENST00000378078 CRCT1Q9UGL9 99 aa8.24□□□□□ -1.09
RGP1-201ENST00000378078 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
RGP1-201ENST00000378078 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
RGP1-201ENST00000378078 NBEAQ8NFP9 2946 aa8.15□□□□□ -1.1
RGP1-201ENST00000378078 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
RGP1-201ENST00000378078 ITPR1Q14643 2758 aa8.11□□□□□ -1.11
RGP1-201ENST00000378078 SMG1Q96Q15 3661 aaKnown RBP8.06□□□□□ -1.12
RGP1-201ENST00000378078 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
RGP1-201ENST00000378078 SVEP1Q4LDE5 3571 aa8.01□□□□□ -1.13
RGP1-201ENST00000378078 CELSR2Q9HCU4 2923 aa7.96□□□□□ -1.13
RGP1-201ENST00000378078 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.15
RGP1-201ENST00000378078 ZFHX3Q15911 3703 aa7.89□□□□□ -1.15
RGP1-201ENST00000378078 CUBNO60494 3623 aa7.88□□□□□ -1.15
RGP1-201ENST00000378078 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
RGP1-201ENST00000378078 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
RGP1-201ENST00000378078 TENM4Q6N022 2769 aa7.82□□□□□ -1.16
RGP1-201ENST00000378078 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
RGP1-201ENST00000378078 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
RGP1-201ENST00000378078 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
RGP1-201ENST00000378078 CSMD2Q7Z408 3487 aa7.78□□□□□ -1.16
RGP1-201ENST00000378078 FLNCQ14315 2725 aa7.75□□□□□ -1.17
RGP1-201ENST00000378078 FBN2P35556 2912 aa7.72□□□□□ -1.17
RGP1-201ENST00000378078 HRNRQ86YZ3 2850 aaPredicted RBP7.69□□□□□ -1.18
RGP1-201ENST00000378078 TGP01266 2768 aa7.69□□□□□ -1.18
RGP1-201ENST00000378078 MUC3AQ02505 3323 aa7.63□□□□□ -1.19
RGP1-201ENST00000378078 NF1P21359 2839 aa7.62□□□□□ -1.19
RGP1-201ENST00000378078 ZANQ9Y493 2812 aa7.6□□□□□ -1.19
RGP1-201ENST00000378078 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
RGP1-201ENST00000378078 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
RGP1-201ENST00000378078 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
RGP1-201ENST00000378078 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
RGP1-201ENST00000378078 VWFP04275 2813 aa7.52□□□□□ -1.21
RGP1-201ENST00000378078 PKD1L1Q8TDX9 2849 aa7.5□□□□□ -1.21
RGP1-201ENST00000378078 ANK3Q12955 4377 aaKnown RBP7.49□□□□□ -1.21
RGP1-201ENST00000378078 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
RGP1-201ENST00000378078 TENM3Q9P273 2699 aa7.44□□□□□ -1.22
RGP1-201ENST00000378078 TRRAPQ9Y4A5 3859 aa7.41□□□□□ -1.22
RGP1-201ENST00000378078 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
RGP1-201ENST00000378078 MXRA5Q9NR99 2828 aa7.37□□□□□ -1.23
RGP1-201ENST00000378078 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
RGP1-201ENST00000378078 PDZD2O15018 2839 aa7.33□□□□□ -1.24
RGP1-201ENST00000378078 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
RGP1-201ENST00000378078 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
RGP1-201ENST00000378078 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
RGP1-201ENST00000378078 AKAP9Q99996 3911 aa7.25□□□□□ -1.25
RGP1-201ENST00000378078 HUWE1Q7Z6Z7 4374 aaKnown RBP7.22□□□□□ -1.25
RGP1-201ENST00000378078 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
RGP1-201ENST00000378078 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
RGP1-201ENST00000378078 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
RGP1-201ENST00000378078 FBN1P35555 2871 aaKnown RBP7.1□□□□□ -1.27
RGP1-201ENST00000378078 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
RGP1-201ENST00000378078 INE1O15225 51 aa7.07□□□□□ -1.28
RGP1-201ENST00000378078 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
RGP1-201ENST00000378078 ZNF469Q96JG9 3925 aaPredicted RBP7□□□□□ -1.29
RGP1-201ENST00000378078 MEGF8Q7Z7M0 2845 aa7□□□□□ -1.29
RGP1-201ENST00000378078 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
RGP1-201ENST00000378078 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms