RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 FBN2P35556 2912 aa3.41□□□□□ -1.86
CUBN-202ENST00000377833 KRTAP10-2P60368 255 aa3.4□□□□□ -1.86
CUBN-202ENST00000377833 PRUNE2Q8WUY3 3088 aa3.4□□□□□ -1.87
CUBN-202ENST00000377833 H3BS24 57 aa3.39□□□□□ -1.87
CUBN-202ENST00000377833 TRIOO75962 3097 aa3.39□□□□□ -1.87
CUBN-202ENST00000377833 VPS13AQ96RL7 3174 aa3.39□□□□□ -1.87
CUBN-202ENST00000377833 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
CUBN-202ENST00000377833 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
CUBN-202ENST00000377833 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
CUBN-202ENST00000377833 CFAP54Q96N23 3096 aa3.37□□□□□ -1.87
CUBN-202ENST00000377833 C5orf42Q9H799 3197 aa3.36□□□□□ -1.87
CUBN-202ENST00000377833 COL12A1Q99715 3063 aa3.36□□□□□ -1.87
CUBN-202ENST00000377833 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
CUBN-202ENST00000377833 ATMQ13315 3056 aa3.33□□□□□ -1.88
CUBN-202ENST00000377833 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
CUBN-202ENST00000377833 HTTP42858 3142 aa3.31□□□□□ -1.88
CUBN-202ENST00000377833 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
CUBN-202ENST00000377833 H0YAA0 97 aa3.29□□□□□ -1.88
CUBN-202ENST00000377833 WDFY4Q6ZS81 3184 aa3.28□□□□□ -1.88
CUBN-202ENST00000377833 DMXL1Q9Y485 3027 aa3.28□□□□□ -1.89
CUBN-202ENST00000377833 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
CUBN-202ENST00000377833 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
CUBN-202ENST00000377833 LAMA1P25391 3075 aa3.26□□□□□ -1.89
CUBN-202ENST00000377833 KRTAP11-1Q8IUC1 163 aa3.26□□□□□ -1.89
CUBN-202ENST00000377833 XP32Q5T750 250 aa3.26□□□□□ -1.89
CUBN-202ENST00000377833 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
CUBN-202ENST00000377833 UTRNP46939 3433 aa3.23□□□□□ -1.89
CUBN-202ENST00000377833 REV3LO60673 3130 aa3.23□□□□□ -1.89
CUBN-202ENST00000377833 USP34Q70CQ2 3546 aa3.23□□□□□ -1.89
CUBN-202ENST00000377833 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
CUBN-202ENST00000377833 CELSR1Q9NYQ6 3014 aa3.21□□□□□ -1.9
CUBN-202ENST00000377833 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
CUBN-202ENST00000377833 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
CUBN-202ENST00000377833 OTOGQ6ZRI0 2925 aa3.17□□□□□ -1.9
CUBN-202ENST00000377833 P0C880 135 aa3.17□□□□□ -1.9
CUBN-202ENST00000377833 FBN3Q75N90 2809 aa3.16□□□□□ -1.9
CUBN-202ENST00000377833 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
CUBN-202ENST00000377833 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
CUBN-202ENST00000377833 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
CUBN-202ENST00000377833 BRCA2P51587 3418 aa3.12□□□□□ -1.91
CUBN-202ENST00000377833 LAMA3Q16787 3333 aa3.1□□□□□ -1.91
CUBN-202ENST00000377833 A8MU10 97 aa3.1□□□□□ -1.91
CUBN-202ENST00000377833 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
CUBN-202ENST00000377833 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.92
CUBN-202ENST00000377833 MKI67P46013 3256 aaKnown RBP3.09□□□□□ -1.92
CUBN-202ENST00000377833 EYSQ5T1H1 3165 aa3.08□□□□□ -1.92
CUBN-202ENST00000377833 UNC80Q8N2C7 3258 aa3.07□□□□□ -1.92
CUBN-202ENST00000377833 XIRP2A4UGR9 3374 aa3.06□□□□□ -1.92
CUBN-202ENST00000377833 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
CUBN-202ENST00000377833 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
CUBN-202ENST00000377833 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
CUBN-202ENST00000377833 KRTAP10-10P60014 251 aa3□□□□□ -1.93
CUBN-202ENST00000377833 CELSR3Q9NYQ7 3312 aa2.99□□□□□ -1.93
CUBN-202ENST00000377833 INE1O15225 51 aa2.98□□□□□ -1.93
CUBN-202ENST00000377833 COL6A3P12111 3177 aa2.98□□□□□ -1.93
CUBN-202ENST00000377833 DNAH14Q0VDD8 3507 aa2.96□□□□□ -1.94
CUBN-202ENST00000377833 CFAP47Q6ZTR5 3102 aa2.96□□□□□ -1.94
CUBN-202ENST00000377833 CDH23Q9H251 3354 aa2.94□□□□□ -1.94
CUBN-202ENST00000377833 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
CUBN-202ENST00000377833 SPTBN5Q9NRC6 3674 aaKnown RBP2.9□□□□□ -1.94
CUBN-202ENST00000377833 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
CUBN-202ENST00000377833 VCANP13611 3396 aa2.87□□□□□ -1.95
CUBN-202ENST00000377833 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
CUBN-202ENST00000377833 ZFHX3Q15911 3703 aa2.85□□□□□ -1.95
CUBN-202ENST00000377833 SZT2Q5T011 3432 aa2.84□□□□□ -1.95
CUBN-202ENST00000377833 MYO15AQ9UKN7 3530 aa2.84□□□□□ -1.96
CUBN-202ENST00000377833 WDFY3Q8IZQ1 3526 aa2.8□□□□□ -1.96
CUBN-202ENST00000377833 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CUBN-202ENST00000377833 SPEGQ15772 3267 aa2.78□□□□□ -1.96
CUBN-202ENST00000377833 ZFHX4Q86UP3 3567 aa2.78□□□□□ -1.96
CUBN-202ENST00000377833 KRTAP10-6P60371 365 aaPredicted RBP2.77□□□□□ -1.97
CUBN-202ENST00000377833 SPENQ96T58 3664 aaKnown RBP2.77□□□□□ -1.97
CUBN-202ENST00000377833 KRTAP15-1Q3LI76 137 aa2.77□□□□□ -1.97
CUBN-202ENST00000377833 NBPF19A0A087WUL8 3843 aa2.76□□□□□ -1.97
CUBN-202ENST00000377833 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
CUBN-202ENST00000377833 DMDP11532 3685 aa2.72□□□□□ -1.97
CUBN-202ENST00000377833 ASPMQ8IZT6 3477 aa2.7□□□□□ -1.98
CUBN-202ENST00000377833 LOC400499M0QZD8 3231 aa2.7□□□□□ -1.98
CUBN-202ENST00000377833 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
CUBN-202ENST00000377833 TRRAPQ9Y4A5 3859 aa2.68□□□□□ -1.98
CUBN-202ENST00000377833 LAMA5O15230 3695 aa2.68□□□□□ -1.98
CUBN-202ENST00000377833 SMG1Q96Q15 3661 aaKnown RBP2.68□□□□□ -1.98
CUBN-202ENST00000377833 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
CUBN-202ENST00000377833 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
CUBN-202ENST00000377833 DCHS1Q96JQ0 3298 aa2.65□□□□□ -1.98
CUBN-202ENST00000377833 CUBNO60494 3623 aa2.64□□□□□ -1.99
CUBN-202ENST00000377833 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
CUBN-202ENST00000377833 CSMD1Q96PZ7 3565 aa2.63□□□□□ -1.99
CUBN-202ENST00000377833 BSNQ9UPA5 3926 aa2.63□□□□□ -1.99
CUBN-202ENST00000377833 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
CUBN-202ENST00000377833 AKAP9Q99996 3911 aa2.61□□□□□ -1.99
CUBN-202ENST00000377833 RELNP78509 3460 aa2.59□□□□□ -2
CUBN-202ENST00000377833 SVEP1Q4LDE5 3571 aa2.55□□□□□ -2
CUBN-202ENST00000377833 VPS13CQ709C8 3753 aa2.54□□□□□ -2
CUBN-202ENST00000377833 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
CUBN-202ENST00000377833 ALMS1Q8TCU4 4167 aa2.49□□□□□ -2.01
CUBN-202ENST00000377833 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
CUBN-202ENST00000377833 ANK2Q01484 3957 aa2.47□□□□□ -2.01
CUBN-202ENST00000377833 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CUBN-202ENST00000377833 MUC3AQ02505 3323 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms