RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 M0QZ58 72 aa10.28□□□□□ -0.76
CNTNAP3-204ENST00000377656 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.76
CNTNAP3-204ENST00000377656 NOTCH2NLQ7Z3S9 236 aa10.27□□□□□ -0.77
CNTNAP3-204ENST00000377656 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
CNTNAP3-204ENST00000377656 DCHS2Q6V1P9 2916 aa10.23□□□□□ -0.77
CNTNAP3-204ENST00000377656 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
CNTNAP3-204ENST00000377656 ROMO1P60602 79 aa10.21□□□□□ -0.78
CNTNAP3-204ENST00000377656 RPS29P62273 56 aaKnown RBP10.19□□□□□ -0.78
CNTNAP3-204ENST00000377656 DMXL1Q9Y485 3027 aa10.18□□□□□ -0.78
CNTNAP3-204ENST00000377656 LOC400499M0QZD8 3231 aa10.18□□□□□ -0.78
CNTNAP3-204ENST00000377656 CRYBG3Q68DQ2 2970 aa10.17□□□□□ -0.78
CNTNAP3-204ENST00000377656 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
CNTNAP3-204ENST00000377656 SPTBN5Q9NRC6 3674 aaKnown RBP10.14□□□□□ -0.79
CNTNAP3-204ENST00000377656 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
CNTNAP3-204ENST00000377656 NF1P21359 2839 aa10.12□□□□□ -0.79
CNTNAP3-204ENST00000377656 KRTAP13-1Q8IUC0 172 aa10.11□□□□□ -0.79
CNTNAP3-204ENST00000377656 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
CNTNAP3-204ENST00000377656 FBN2P35556 2912 aa10.08□□□□□ -0.8
CNTNAP3-204ENST00000377656 USP34Q70CQ2 3546 aa10.08□□□□□ -0.8
CNTNAP3-204ENST00000377656 MYO15AQ9UKN7 3530 aa10.05□□□□□ -0.8
CNTNAP3-204ENST00000377656 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
CNTNAP3-204ENST00000377656 HRNRQ86YZ3 2850 aaPredicted RBP10.04□□□□□ -0.8
CNTNAP3-204ENST00000377656 TNRC18O15417 2968 aaPredicted RBP10.04□□□□□ -0.8
CNTNAP3-204ENST00000377656 A0A0A0MQY5 61 aa9.99□□□□□ -0.81
CNTNAP3-204ENST00000377656 KRTAP21-3Q3LHN1 58 aa9.99□□□□□ -0.81
CNTNAP3-204ENST00000377656 TENM3Q9P273 2699 aa9.98□□□□□ -0.81
CNTNAP3-204ENST00000377656 A8MUU9 505 aa9.9□□□□□ -0.82
CNTNAP3-204ENST00000377656 A8MU10 97 aa9.86□□□□□ -0.83
CNTNAP3-204ENST00000377656 H3BS24 57 aa9.85□□□□□ -0.83
CNTNAP3-204ENST00000377656 A6NN06 94 aa9.85□□□□□ -0.83
CNTNAP3-204ENST00000377656 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
CNTNAP3-204ENST00000377656 TENM1Q9UKZ4 2725 aa9.8□□□□□ -0.84
CNTNAP3-204ENST00000377656 MXRA5Q9NR99 2828 aa9.75□□□□□ -0.85
CNTNAP3-204ENST00000377656 DCHS1Q96JQ0 3298 aa9.71□□□□□ -0.85
CNTNAP3-204ENST00000377656 KRTAP25-1Q3LHN0 102 aa9.7□□□□□ -0.86
CNTNAP3-204ENST00000377656 RELNP78509 3460 aa9.69□□□□□ -0.86
CNTNAP3-204ENST00000377656 WDFY3Q8IZQ1 3526 aa9.68□□□□□ -0.86
CNTNAP3-204ENST00000377656 CELSR1Q9NYQ6 3014 aa9.65□□□□□ -0.87
CNTNAP3-204ENST00000377656 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
CNTNAP3-204ENST00000377656 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
CNTNAP3-204ENST00000377656 PKD1L1Q8TDX9 2849 aa9.54□□□□□ -0.88
CNTNAP3-204ENST00000377656 TNP1P09430 55 aa9.53□□□□□ -0.88
CNTNAP3-204ENST00000377656 XP32Q5T750 250 aa9.53□□□□□ -0.88
CNTNAP3-204ENST00000377656 ASPMQ8IZT6 3477 aa9.48□□□□□ -0.89
CNTNAP3-204ENST00000377656 LAMA5O15230 3695 aa9.45□□□□□ -0.9
CNTNAP3-204ENST00000377656 ZFHX4Q86UP3 3567 aa9.43□□□□□ -0.9
CNTNAP3-204ENST00000377656 PDZD2O15018 2839 aa9.41□□□□□ -0.9
CNTNAP3-204ENST00000377656 MUC3AQ02505 3323 aa9.39□□□□□ -0.91
CNTNAP3-204ENST00000377656 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
CNTNAP3-204ENST00000377656 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
CNTNAP3-204ENST00000377656 VWFP04275 2813 aa9.36□□□□□ -0.91
CNTNAP3-204ENST00000377656 TGP01266 2768 aa9.34□□□□□ -0.91
CNTNAP3-204ENST00000377656 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
CNTNAP3-204ENST00000377656 FBN1P35555 2871 aaKnown RBP9.32□□□□□ -0.92
CNTNAP3-204ENST00000377656 DMDP11532 3685 aa9.31□□□□□ -0.92
CNTNAP3-204ENST00000377656 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
CNTNAP3-204ENST00000377656 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
CNTNAP3-204ENST00000377656 PP632Q6XCG6 107 aa9.26□□□□□ -0.93
CNTNAP3-204ENST00000377656 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
CNTNAP3-204ENST00000377656 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
CNTNAP3-204ENST00000377656 H0YAA0 97 aa9.22□□□□□ -0.93
CNTNAP3-204ENST00000377656 CSMD1Q96PZ7 3565 aa9.21□□□□□ -0.94
CNTNAP3-204ENST00000377656 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
CNTNAP3-204ENST00000377656 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
CNTNAP3-204ENST00000377656 P0C880 135 aa9.09□□□□□ -0.95
CNTNAP3-204ENST00000377656 SMG1Q96Q15 3661 aaKnown RBP9.08□□□□□ -0.96
CNTNAP3-204ENST00000377656 CUBNO60494 3623 aa9.08□□□□□ -0.96
CNTNAP3-204ENST00000377656 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
CNTNAP3-204ENST00000377656 ZFHX3Q15911 3703 aa8.99□□□□□ -0.97
CNTNAP3-204ENST00000377656 SVEP1Q4LDE5 3571 aa8.98□□□□□ -0.97
CNTNAP3-204ENST00000377656 NBPF19A0A087WUL8 3843 aa8.97□□□□□ -0.97
CNTNAP3-204ENST00000377656 PRO2289Q9P1D8 64 aa8.97□□□□□ -0.97
CNTNAP3-204ENST00000377656 FBN3Q75N90 2809 aa8.87□□□□□ -0.99
CNTNAP3-204ENST00000377656 CSMD2Q7Z408 3487 aa8.81□□□□□ -1
CNTNAP3-204ENST00000377656 ANK3Q12955 4377 aaKnown RBP8.76□□□□□ -1.01
CNTNAP3-204ENST00000377656 SPENQ96T58 3664 aaKnown RBP8.73□□□□□ -1.01
CNTNAP3-204ENST00000377656 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
CNTNAP3-204ENST00000377656 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
CNTNAP3-204ENST00000377656 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
CNTNAP3-204ENST00000377656 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
CNTNAP3-204ENST00000377656 TRRAPQ9Y4A5 3859 aa8.57□□□□□ -1.04
CNTNAP3-204ENST00000377656 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
CNTNAP3-204ENST00000377656 BSNQ9UPA5 3926 aa8.56□□□□□ -1.04
CNTNAP3-204ENST00000377656 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
CNTNAP3-204ENST00000377656 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
CNTNAP3-204ENST00000377656 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
CNTNAP3-204ENST00000377656 HUWE1Q7Z6Z7 4374 aaKnown RBP8.21□□□□□ -1.1
CNTNAP3-204ENST00000377656 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
CNTNAP3-204ENST00000377656 VPS13CQ709C8 3753 aa8.17□□□□□ -1.1
CNTNAP3-204ENST00000377656 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
CNTNAP3-204ENST00000377656 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
CNTNAP3-204ENST00000377656 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
CNTNAP3-204ENST00000377656 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CNTNAP3-204ENST00000377656 CSMD3Q7Z407 3707 aa7.97□□□□□ -1.13
CNTNAP3-204ENST00000377656 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
CNTNAP3-204ENST00000377656 ZNF469Q96JG9 3925 aaPredicted RBP7.87□□□□□ -1.15
CNTNAP3-204ENST00000377656 AKAP9Q99996 3911 aa7.84□□□□□ -1.15
CNTNAP3-204ENST00000377656 DNAH9Q9NYC9 4486 aa7.84□□□□□ -1.15
CNTNAP3-204ENST00000377656 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
CNTNAP3-204ENST00000377656 DNAH1Q9P2D7 4330 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms