RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.25
CLCN6-206ENST00000376496 A0A1B0GVX0 72 aa7.21□□□□□ -1.25
CLCN6-206ENST00000376496 C1orf195Q5TG92 126 aa7.21□□□□□ -1.25
CLCN6-206ENST00000376496 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
CLCN6-206ENST00000376496 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
CLCN6-206ENST00000376496 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
CLCN6-206ENST00000376496 SMIM20Q8N5G0 67 aa7.19□□□□□ -1.26
CLCN6-206ENST00000376496 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
CLCN6-206ENST00000376496 PKHD1L1Q86WI1 4243 aa7.17□□□□□ -1.26
CLCN6-206ENST00000376496 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
CLCN6-206ENST00000376496 SPINK1P00995 79 aa7.15□□□□□ -1.27
CLCN6-206ENST00000376496 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.27
CLCN6-206ENST00000376496 LIMD2Q9BT23 127 aa7.15□□□□□ -1.27
CLCN6-206ENST00000376496 NDUFS5O43920 106 aa7.14□□□□□ -1.27
CLCN6-206ENST00000376496 Q5XG85 94 aa7.14□□□□□ -1.27
CLCN6-206ENST00000376496 RETNLBQ9BQ08 111 aa7.12□□□□□ -1.27
CLCN6-206ENST00000376496 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
CLCN6-206ENST00000376496 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
CLCN6-206ENST00000376496 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
CLCN6-206ENST00000376496 Q8N1X5 172 aa7.09□□□□□ -1.27
CLCN6-206ENST00000376496 MYCBP2O75592 4640 aa7.08□□□□□ -1.28
CLCN6-206ENST00000376496 LINC00313P59037 77 aa7.08□□□□□ -1.28
CLCN6-206ENST00000376496 H7BZZ5 65 aa7.07□□□□□ -1.28
CLCN6-206ENST00000376496 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
CLCN6-206ENST00000376496 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
CLCN6-206ENST00000376496 H0Y9P7 68 aa7.07□□□□□ -1.28
CLCN6-206ENST00000376496 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
CLCN6-206ENST00000376496 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
CLCN6-206ENST00000376496 C5orf47Q569G3 176 aa7.05□□□□□ -1.28
CLCN6-206ENST00000376496 TNXBP22105 4242 aa7.05□□□□□ -1.28
CLCN6-206ENST00000376496 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
CLCN6-206ENST00000376496 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
CLCN6-206ENST00000376496 Q5W150 140 aa7.03□□□□□ -1.28
CLCN6-206ENST00000376496 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
CLCN6-206ENST00000376496 MP68P56378 58 aa7.02□□□□□ -1.29
CLCN6-206ENST00000376496 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
CLCN6-206ENST00000376496 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
CLCN6-206ENST00000376496 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
CLCN6-206ENST00000376496 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
CLCN6-206ENST00000376496 KRTAP16-1A8MUX0 517 aa7.01□□□□□ -1.29
CLCN6-206ENST00000376496 TMEM258P61165 79 aa7□□□□□ -1.29
CLCN6-206ENST00000376496 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
CLCN6-206ENST00000376496 PRR4Q16378 134 aa6.98□□□□□ -1.29
CLCN6-206ENST00000376496 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
CLCN6-206ENST00000376496 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
CLCN6-206ENST00000376496 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
CLCN6-206ENST00000376496 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
CLCN6-206ENST00000376496 PCOTHQ58A44 107 aa6.95□□□□□ -1.3
CLCN6-206ENST00000376496 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
CLCN6-206ENST00000376496 NDUFC1O43677 76 aa6.95□□□□□ -1.3
CLCN6-206ENST00000376496 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
CLCN6-206ENST00000376496 OXTP01178 125 aa6.9□□□□□ -1.3
CLCN6-206ENST00000376496 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
CLCN6-206ENST00000376496 H3BPC8 53 aa6.89□□□□□ -1.31
CLCN6-206ENST00000376496 IGKV2D-30A0A075B6S6 120 aa6.84□□□□□ -1.31
CLCN6-206ENST00000376496 IGKV2-30P06310 120 aa6.84□□□□□ -1.31
CLCN6-206ENST00000376496 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
CLCN6-206ENST00000376496 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
CLCN6-206ENST00000376496 IGLV7-46A0A075B6I9 117 aa6.83□□□□□ -1.32
CLCN6-206ENST00000376496 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
CLCN6-206ENST00000376496 A8MUU9 505 aa6.8□□□□□ -1.32
CLCN6-206ENST00000376496 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
CLCN6-206ENST00000376496 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
CLCN6-206ENST00000376496 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
CLCN6-206ENST00000376496 HERC2O95714 4834 aa6.79□□□□□ -1.32
CLCN6-206ENST00000376496 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
CLCN6-206ENST00000376496 HRES1P13985 223 aa6.77□□□□□ -1.33
CLCN6-206ENST00000376496 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
CLCN6-206ENST00000376496 SPANXA2-OT1Q8N9U9 137 aa6.75□□□□□ -1.33
CLCN6-206ENST00000376496 XP32Q5T750 250 aa6.73□□□□□ -1.33
CLCN6-206ENST00000376496 J3QL48 77 aa6.72□□□□□ -1.33
CLCN6-206ENST00000376496 LPAP08519 4548 aa6.72□□□□□ -1.33
CLCN6-206ENST00000376496 Q75L30 129 aa6.71□□□□□ -1.33
CLCN6-206ENST00000376496 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
CLCN6-206ENST00000376496 C4orf26Q17RF5 130 aa6.67□□□□□ -1.34
CLCN6-206ENST00000376496 COA5Q86WW8 74 aa6.67□□□□□ -1.34
CLCN6-206ENST00000376496 SPINK7P58062 85 aa6.67□□□□□ -1.34
CLCN6-206ENST00000376496 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
CLCN6-206ENST00000376496 LRP2P98164 4655 aa6.66□□□□□ -1.34
CLCN6-206ENST00000376496 ATP11AUNQ6ZP68 121 aa6.66□□□□□ -1.34
CLCN6-206ENST00000376496 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
CLCN6-206ENST00000376496 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.35
CLCN6-206ENST00000376496 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
CLCN6-206ENST00000376496 SEC61GP60059 68 aa6.61□□□□□ -1.35
CLCN6-206ENST00000376496 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
CLCN6-206ENST00000376496 TPRXLQ17RH7 258 aa6.6□□□□□ -1.35
CLCN6-206ENST00000376496 ACYP2P14621 99 aa6.57□□□□□ -1.36
CLCN6-206ENST00000376496 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
CLCN6-206ENST00000376496 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
CLCN6-206ENST00000376496 HERC1Q15751 4861 aa6.53□□□□□ -1.36
CLCN6-206ENST00000376496 PSPHP1O15172 72 aa6.51□□□□□ -1.37
CLCN6-206ENST00000376496 PRO0628Q9UI54 55 aa6.51□□□□□ -1.37
CLCN6-206ENST00000376496 V9GYY9 64 aa6.5□□□□□ -1.37
CLCN6-206ENST00000376496 Q1T7F1 81 aa6.46□□□□□ -1.37
CLCN6-206ENST00000376496 A8MUN3 132 aa6.46□□□□□ -1.38
CLCN6-206ENST00000376496 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
CLCN6-206ENST00000376496 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
CLCN6-206ENST00000376496 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
CLCN6-206ENST00000376496 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
CLCN6-206ENST00000376496 SEC61BP60468 96 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms