RNA–Protein interactions for RNA: ENST00000376389.7

FLOT1-201, Transcript of flotillin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FLOT1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-201ENST00000376389 KRTAP29-1A8MX34 341 aaPredicted RBP12.94□□□□□ -0.34
FLOT1-201ENST00000376389 SMIM20Q8N5G0 67 aa12.94□□□□□ -0.34
FLOT1-201ENST00000376389 LIMD2Q9BT23 127 aa12.94□□□□□ -0.34
FLOT1-201ENST00000376389 OCR1Q9BZK8 76 aa12.94□□□□□ -0.34
FLOT1-201ENST00000376389 NOTCH2NLQ7Z3S9 236 aa12.91□□□□□ -0.34
FLOT1-201ENST00000376389 C8orf17Q9NRJ1 99 aa12.91□□□□□ -0.34
FLOT1-201ENST00000376389 hDV103S1A0JD37 113 aa12.87□□□□□ -0.35
FLOT1-201ENST00000376389 SPAG11AQ6PDA7 123 aa12.86□□□□□ -0.35
FLOT1-201ENST00000376389 LRP1Q07954 4544 aaKnown RBP12.86□□□□□ -0.35
FLOT1-201ENST00000376389 Q8N1X5 172 aa12.85□□□□□ -0.35
FLOT1-201ENST00000376389 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
FLOT1-201ENST00000376389 CYSTM1Q9H1C7 97 aa12.84□□□□□ -0.35
FLOT1-201ENST00000376389 TNXBP22105 4242 aa12.81□□□□□ -0.36
FLOT1-201ENST00000376389 RPS29P62273 56 aaKnown RBP12.8□□□□□ -0.36
FLOT1-201ENST00000376389 SNURFQ9Y675 71 aa12.78□□□□□ -0.36
FLOT1-201ENST00000376389 KRTAP10-8P60410 259 aa12.75□□□□□ -0.37
FLOT1-201ENST00000376389 FAT3Q8TDW7 4589 aa12.75□□□□□ -0.37
FLOT1-201ENST00000376389 MRPL34Q9BQ48 92 aaKnown RBP12.74□□□□□ -0.37
FLOT1-201ENST00000376389 LINC00313P59037 77 aa12.73□□□□□ -0.37
FLOT1-201ENST00000376389 TMEM254Q8TBM7 123 aa12.73□□□□□ -0.37
FLOT1-201ENST00000376389 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
FLOT1-201ENST00000376389 C8orf87E5RJ46 101 aa12.71□□□□□ -0.37
FLOT1-201ENST00000376389 NDUFS5O43920 106 aa12.71□□□□□ -0.37
FLOT1-201ENST00000376389 RETNLBQ9BQ08 111 aa12.69□□□□□ -0.38
FLOT1-201ENST00000376389 KLKP1Q107X0 134 aa12.68□□□□□ -0.38
FLOT1-201ENST00000376389 A0A0U1RQV1 116 aa12.66□□□□□ -0.38
FLOT1-201ENST00000376389 C5orf47Q569G3 176 aa12.66□□□□□ -0.38
FLOT1-201ENST00000376389 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
FLOT1-201ENST00000376389 KRTAP4-5Q9BYR2 181 aa12.66□□□□□ -0.38
FLOT1-201ENST00000376389 H0Y9P7 68 aa12.62□□□□□ -0.39
FLOT1-201ENST00000376389 KRTAP16-1A8MUX0 517 aa12.6□□□□□ -0.39
FLOT1-201ENST00000376389 TP53AIP1Q9HCN2 124 aa12.6□□□□□ -0.39
FLOT1-201ENST00000376389 MP68P56378 58 aa12.58□□□□□ -0.39
FLOT1-201ENST00000376389 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
FLOT1-201ENST00000376389 H7BZZ5 65 aa12.57□□□□□ -0.4
FLOT1-201ENST00000376389 TRAV22A0A0B4J277 110 aa12.56□□□□□ -0.4
FLOT1-201ENST00000376389 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
FLOT1-201ENST00000376389 ZCCHC13Q8WW36 166 aaKnown RBP12.54□□□□□ -0.4
FLOT1-201ENST00000376389 Q8N9P0 234 aaPredicted RBP12.53□□□□□ -0.4
FLOT1-201ENST00000376389 C9orf92A6NGG3 77 aa12.52□□□□□ -0.4
FLOT1-201ENST00000376389 Q5W150 140 aa12.51□□□□□ -0.41
FLOT1-201ENST00000376389 DMBT1Q9UGM3 2413 aaPredicted RBP12.49□□□□□ -0.41
FLOT1-201ENST00000376389 C1orf64Q8NEQ6 169 aa12.49□□□□□ -0.41
FLOT1-201ENST00000376389 TMEM258P61165 79 aa12.48□□□□□ -0.41
FLOT1-201ENST00000376389 BIRC6Q9NR09 4857 aa12.47□□□□□ -0.41
FLOT1-201ENST00000376389 NDUFC1O43677 76 aa12.47□□□□□ -0.41
FLOT1-201ENST00000376389 H3BPC8 53 aa12.44□□□□□ -0.42
FLOT1-201ENST00000376389 KRTAP13-3Q3SY46 172 aa12.43□□□□□ -0.42
FLOT1-201ENST00000376389 OXTP01178 125 aa12.43□□□□□ -0.42
FLOT1-201ENST00000376389 ABCA13Q86UQ4 5058 aa12.39□□□□□ -0.43
FLOT1-201ENST00000376389 FAM236DA0A1B0GTK5 79 aa12.38□□□□□ -0.43
FLOT1-201ENST00000376389 FAM236CP0DP71 79 aa12.38□□□□□ -0.43
FLOT1-201ENST00000376389 HERC2O95714 4834 aa12.36□□□□□ -0.43
FLOT1-201ENST00000376389 PCOTHQ58A44 107 aa12.33□□□□□ -0.44
FLOT1-201ENST00000376389 FP248Q71RG6 208 aaPredicted RBP12.32□□□□□ -0.44
FLOT1-201ENST00000376389 IGLV7-46A0A075B6I9 117 aa12.31□□□□□ -0.44
FLOT1-201ENST00000376389 A8MUU9 505 aa12.29□□□□□ -0.44
FLOT1-201ENST00000376389 C20orf166-AS1Q96NR2 134 aa12.29□□□□□ -0.44
FLOT1-201ENST00000376389 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
FLOT1-201ENST00000376389 PRR4Q16378 134 aa12.28□□□□□ -0.44
FLOT1-201ENST00000376389 CYP4F30PQ9H0H9 118 aa12.25□□□□□ -0.45
FLOT1-201ENST00000376389 IGKV2-30P06310 120 aa12.21□□□□□ -0.46
FLOT1-201ENST00000376389 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.46
FLOT1-201ENST00000376389 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
FLOT1-201ENST00000376389 J3QL48 77 aa12.16□□□□□ -0.46
FLOT1-201ENST00000376389 Q75L30 129 aa12.15□□□□□ -0.46
FLOT1-201ENST00000376389 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
FLOT1-201ENST00000376389 XP32Q5T750 250 aa12.13□□□□□ -0.47
FLOT1-201ENST00000376389 SERP1Q9Y6X1 66 aa12.11□□□□□ -0.47
FLOT1-201ENST00000376389 RPS28P62857 69 aaKnown RBP12.09□□□□□ -0.47
FLOT1-201ENST00000376389 HRES1P13985 223 aa12.08□□□□□ -0.48
FLOT1-201ENST00000376389 RPL37P61927 97 aaKnown RBP12.04□□□□□ -0.48
FLOT1-201ENST00000376389 C7orf65Q6ZTY9 151 aa12.03□□□□□ -0.48
FLOT1-201ENST00000376389 ATP11AUNQ6ZP68 121 aa12.01□□□□□ -0.49
FLOT1-201ENST00000376389 TPRXLQ17RH7 258 aa11.99□□□□□ -0.49
FLOT1-201ENST00000376389 LPAP08519 4548 aa11.99□□□□□ -0.49
FLOT1-201ENST00000376389 SPINK7P58062 85 aa11.96□□□□□ -0.5
FLOT1-201ENST00000376389 PCLOQ9Y6V0 5065 aa11.92□□□□□ -0.5
FLOT1-201ENST00000376389 COA5Q86WW8 74 aa11.88□□□□□ -0.51
FLOT1-201ENST00000376389 LRP2P98164 4655 aa11.88□□□□□ -0.51
FLOT1-201ENST00000376389 C4orf26Q17RF5 130 aa11.88□□□□□ -0.51
FLOT1-201ENST00000376389 DMAC1Q96GE9 116 aa11.86□□□□□ -0.51
FLOT1-201ENST00000376389 ACYP2P14621 99 aa11.8□□□□□ -0.52
FLOT1-201ENST00000376389 SMIM26A0A096LP01 95 aa11.8□□□□□ -0.52
FLOT1-201ENST00000376389 MPLKIPQ8TAP9 179 aa11.72□□□□□ -0.53
FLOT1-201ENST00000376389 KRTAP3-1Q9BYR8 98 aa11.7□□□□□ -0.54
FLOT1-201ENST00000376389 HERC1Q15751 4861 aa11.7□□□□□ -0.54
FLOT1-201ENST00000376389 CHKB-CPT1BH3BT56 60 aa11.66□□□□□ -0.54
FLOT1-201ENST00000376389 A8MUN3 132 aa11.63□□□□□ -0.55
FLOT1-201ENST00000376389 COX6B2Q6YFQ2 88 aa11.63□□□□□ -0.55
FLOT1-201ENST00000376389 SEC61BP60468 96 aaKnown RBP11.58□□□□□ -0.56
FLOT1-201ENST00000376389 Q1T7F1 81 aa11.54□□□□□ -0.56
FLOT1-201ENST00000376389 SVIPQ8NHG7 77 aa11.52□□□□□ -0.56
FLOT1-201ENST00000376389 HMCN2Q8NDA2 5059 aa11.52□□□□□ -0.57
FLOT1-201ENST00000376389 KRTAP4-1Q9BYQ7 146 aa11.47□□□□□ -0.57
FLOT1-201ENST00000376389 MUC17Q685J3 4493 aa11.46□□□□□ -0.58
FLOT1-201ENST00000376389 PSPHP1O15172 72 aa11.45□□□□□ -0.58
FLOT1-201ENST00000376389 V9GYY9 64 aa11.43□□□□□ -0.58
FLOT1-201ENST00000376389 PRR15LQ9BU68 103 aa11.39□□□□□ -0.59
FLOT1-201ENST00000376389 LINC01558Q9Y6Z2 57 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms