RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
TCEA3-201ENST00000374601 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
TCEA3-201ENST00000374601 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
TCEA3-201ENST00000374601 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
TCEA3-201ENST00000374601 K7EQZ3 153 aa7.7□□□□□ -1.18
TCEA3-201ENST00000374601 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
TCEA3-201ENST00000374601 CXCL6P80162 114 aa7.69□□□□□ -1.18
TCEA3-201ENST00000374601 PRR15Q8IV56 129 aa7.69□□□□□ -1.18
TCEA3-201ENST00000374601 Q8N9L7 120 aa7.69□□□□□ -1.18
TCEA3-201ENST00000374601 NDUFB1O75438 58 aa7.68□□□□□ -1.18
TCEA3-201ENST00000374601 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
TCEA3-201ENST00000374601 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
TCEA3-201ENST00000374601 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
TCEA3-201ENST00000374601 LPAP08519 4548 aa7.65□□□□□ -1.19
TCEA3-201ENST00000374601 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
TCEA3-201ENST00000374601 LINC00313P59037 77 aa7.64□□□□□ -1.19
TCEA3-201ENST00000374601 XP32Q5T750 250 aa7.64□□□□□ -1.19
TCEA3-201ENST00000374601 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
TCEA3-201ENST00000374601 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
TCEA3-201ENST00000374601 LRP2P98164 4655 aa7.56□□□□□ -1.2
TCEA3-201ENST00000374601 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
TCEA3-201ENST00000374601 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
TCEA3-201ENST00000374601 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
TCEA3-201ENST00000374601 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
TCEA3-201ENST00000374601 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
TCEA3-201ENST00000374601 A8MUU9 505 aa7.55□□□□□ -1.2
TCEA3-201ENST00000374601 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
TCEA3-201ENST00000374601 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
TCEA3-201ENST00000374601 RPL37P61927 97 aaKnown RBP7.54□□□□□ -1.2
TCEA3-201ENST00000374601 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
TCEA3-201ENST00000374601 Q75L30 129 aa7.54□□□□□ -1.2
TCEA3-201ENST00000374601 A0A087WVE0 104 aa7.53□□□□□ -1.2
TCEA3-201ENST00000374601 Q8N9P0 234 aaPredicted RBP7.52□□□□□ -1.21
TCEA3-201ENST00000374601 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
TCEA3-201ENST00000374601 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
TCEA3-201ENST00000374601 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
TCEA3-201ENST00000374601 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
TCEA3-201ENST00000374601 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
TCEA3-201ENST00000374601 NDUFS5O43920 106 aa7.43□□□□□ -1.22
TCEA3-201ENST00000374601 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
TCEA3-201ENST00000374601 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
TCEA3-201ENST00000374601 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
TCEA3-201ENST00000374601 Q5W150 140 aa7.37□□□□□ -1.23
TCEA3-201ENST00000374601 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
TCEA3-201ENST00000374601 FAM236AA0A1B0GUQ0 79 aa7.35□□□□□ -1.23
TCEA3-201ENST00000374601 FAM236BA0A1B0GV22 79 aa7.35□□□□□ -1.23
TCEA3-201ENST00000374601 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
TCEA3-201ENST00000374601 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
TCEA3-201ENST00000374601 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
TCEA3-201ENST00000374601 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
TCEA3-201ENST00000374601 UQCRQO14949 82 aa7.3□□□□□ -1.24
TCEA3-201ENST00000374601 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
TCEA3-201ENST00000374601 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
TCEA3-201ENST00000374601 SPINK7P58062 85 aa7.25□□□□□ -1.25
TCEA3-201ENST00000374601 ATOX1O00244 68 aa7.24□□□□□ -1.25
TCEA3-201ENST00000374601 H0Y9P7 68 aa7.23□□□□□ -1.25
TCEA3-201ENST00000374601 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
TCEA3-201ENST00000374601 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
TCEA3-201ENST00000374601 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
TCEA3-201ENST00000374601 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
TCEA3-201ENST00000374601 HRES1P13985 223 aa7.21□□□□□ -1.26
TCEA3-201ENST00000374601 C7orf65Q6ZTY9 151 aa7.21□□□□□ -1.26
TCEA3-201ENST00000374601 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
TCEA3-201ENST00000374601 MP68P56378 58 aa7.17□□□□□ -1.26
TCEA3-201ENST00000374601 MUC2Q02817 5179 aa7.16□□□□□ -1.26
TCEA3-201ENST00000374601 LOC101927531A0A1B0GV80 90 aa7.16□□□□□ -1.26
TCEA3-201ENST00000374601 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
TCEA3-201ENST00000374601 KRTAP19-2Q3LHN2 52 aa7.15□□□□□ -1.26
TCEA3-201ENST00000374601 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
TCEA3-201ENST00000374601 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.26
TCEA3-201ENST00000374601 LINC00208Q96KT6 92 aa7.15□□□□□ -1.26
TCEA3-201ENST00000374601 CYP4F30PQ9H0H9 118 aa7.15□□□□□ -1.26
TCEA3-201ENST00000374601 H3BPC8 53 aa7.12□□□□□ -1.27
TCEA3-201ENST00000374601 A0A0U1RQV1 116 aa7.09□□□□□ -1.27
TCEA3-201ENST00000374601 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
TCEA3-201ENST00000374601 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
TCEA3-201ENST00000374601 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
TCEA3-201ENST00000374601 COX7CP15954 63 aa7.06□□□□□ -1.28
TCEA3-201ENST00000374601 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
TCEA3-201ENST00000374601 ANAPC13Q9BS18 74 aa7.06□□□□□ -1.28
TCEA3-201ENST00000374601 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
TCEA3-201ENST00000374601 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
TCEA3-201ENST00000374601 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
TCEA3-201ENST00000374601 FAM236DA0A1B0GTK5 79 aa7.02□□□□□ -1.29
TCEA3-201ENST00000374601 FAM236CP0DP71 79 aa7.02□□□□□ -1.29
TCEA3-201ENST00000374601 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
TCEA3-201ENST00000374601 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
TCEA3-201ENST00000374601 MT1HP80294 61 aa6.95□□□□□ -1.3
TCEA3-201ENST00000374601 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
TCEA3-201ENST00000374601 CCDC179H3BU77 68 aa6.94□□□□□ -1.3
TCEA3-201ENST00000374601 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
TCEA3-201ENST00000374601 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
TCEA3-201ENST00000374601 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
TCEA3-201ENST00000374601 A8MUN3 132 aa6.87□□□□□ -1.31
TCEA3-201ENST00000374601 H7BZZ5 65 aa6.87□□□□□ -1.31
TCEA3-201ENST00000374601 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
TCEA3-201ENST00000374601 NDUFC1O43677 76 aa6.85□□□□□ -1.31
TCEA3-201ENST00000374601 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
TCEA3-201ENST00000374601 S4R3F8 94 aa6.82□□□□□ -1.32
TCEA3-201ENST00000374601 LCA10Q71F78 164 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms