RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 VPS13AQ96RL7 3174 aa9.28□□□□□ -0.92
COL16A1-203ENST00000373672 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.92
COL16A1-203ENST00000373672 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
COL16A1-203ENST00000373672 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
COL16A1-203ENST00000373672 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
COL16A1-203ENST00000373672 HIVEP1P15822 2718 aa9.21□□□□□ -0.93
COL16A1-203ENST00000373672 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.93
COL16A1-203ENST00000373672 TACC2O95359 2948 aa9.18□□□□□ -0.94
COL16A1-203ENST00000373672 ATMQ13315 3056 aa9.17□□□□□ -0.94
COL16A1-203ENST00000373672 FLNCQ14315 2725 aa9.16□□□□□ -0.94
COL16A1-203ENST00000373672 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
COL16A1-203ENST00000373672 LRBAP50851 2863 aa9.13□□□□□ -0.95
COL16A1-203ENST00000373672 CELSR3Q9NYQ7 3312 aa9.11□□□□□ -0.95
COL16A1-203ENST00000373672 NIPBLQ6KC79 2804 aaeCLIP9.09□□□□□ -0.95
COL16A1-203ENST00000373672 CDH23Q9H251 3354 aa9.08□□□□□ -0.96
COL16A1-203ENST00000373672 COL12A1Q99715 3063 aa9.08□□□□□ -0.96
COL16A1-203ENST00000373672 ASH1LQ9NR48 2969 aaKnown RBP9.06□□□□□ -0.96
COL16A1-203ENST00000373672 TENM4Q6N022 2769 aa9.05□□□□□ -0.96
COL16A1-203ENST00000373672 DMXL2Q8TDJ6 3036 aa9.04□□□□□ -0.96
COL16A1-203ENST00000373672 LAMA1P25391 3075 aa9.04□□□□□ -0.96
COL16A1-203ENST00000373672 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
COL16A1-203ENST00000373672 CRYBG3Q68DQ2 2970 aa8.97□□□□□ -0.97
COL16A1-203ENST00000373672 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
COL16A1-203ENST00000373672 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
COL16A1-203ENST00000373672 FRYLO94915 3013 aa8.92□□□□□ -0.98
COL16A1-203ENST00000373672 COL6A3P12111 3177 aa8.92□□□□□ -0.98
COL16A1-203ENST00000373672 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
COL16A1-203ENST00000373672 REV3LO60673 3130 aa8.89□□□□□ -0.99
COL16A1-203ENST00000373672 EYSQ5T1H1 3165 aa8.88□□□□□ -0.99
COL16A1-203ENST00000373672 VCANP13611 3396 aa8.88□□□□□ -0.99
COL16A1-203ENST00000373672 BOD1L1Q8NFC6 3051 aa8.88□□□□□ -0.99
COL16A1-203ENST00000373672 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
COL16A1-203ENST00000373672 DNAH14Q0VDD8 3507 aa8.84□□□□□ -0.99
COL16A1-203ENST00000373672 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
COL16A1-203ENST00000373672 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
COL16A1-203ENST00000373672 ZZEF1O43149 2961 aa8.82□□□□□ -1
COL16A1-203ENST00000373672 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
COL16A1-203ENST00000373672 CFAP47Q6ZTR5 3102 aa8.74□□□□□ -1.01
COL16A1-203ENST00000373672 HRNRQ86YZ3 2850 aaPredicted RBP8.73□□□□□ -1.01
COL16A1-203ENST00000373672 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
COL16A1-203ENST00000373672 TGP01266 2768 aa8.69□□□□□ -1.02
COL16A1-203ENST00000373672 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
COL16A1-203ENST00000373672 TENM1Q9UKZ4 2725 aa8.64□□□□□ -1.03
COL16A1-203ENST00000373672 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
COL16A1-203ENST00000373672 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
COL16A1-203ENST00000373672 USP34Q70CQ2 3546 aa8.6□□□□□ -1.03
COL16A1-203ENST00000373672 TENM3Q9P273 2699 aa8.58□□□□□ -1.04
COL16A1-203ENST00000373672 NF1P21359 2839 aa8.58□□□□□ -1.04
COL16A1-203ENST00000373672 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
COL16A1-203ENST00000373672 FBN2P35556 2912 aa8.52□□□□□ -1.05
COL16A1-203ENST00000373672 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
COL16A1-203ENST00000373672 CELSR1Q9NYQ6 3014 aa8.46□□□□□ -1.06
COL16A1-203ENST00000373672 SPEGQ15772 3267 aa8.44□□□□□ -1.06
COL16A1-203ENST00000373672 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
COL16A1-203ENST00000373672 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
COL16A1-203ENST00000373672 MXRA5Q9NR99 2828 aa8.3□□□□□ -1.08
COL16A1-203ENST00000373672 LOC400499M0QZD8 3231 aa8.19□□□□□ -1.1
COL16A1-203ENST00000373672 MT1HL1P0DM35 61 aa8.15□□□□□ -1.11
COL16A1-203ENST00000373672 PKD1L1Q8TDX9 2849 aa8.15□□□□□ -1.11
COL16A1-203ENST00000373672 PDZD2O15018 2839 aa8.14□□□□□ -1.11
COL16A1-203ENST00000373672 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
COL16A1-203ENST00000373672 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
COL16A1-203ENST00000373672 INE1O15225 51 aa8.09□□□□□ -1.11
COL16A1-203ENST00000373672 VWFP04275 2813 aa8.08□□□□□ -1.12
COL16A1-203ENST00000373672 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
COL16A1-203ENST00000373672 WDFY3Q8IZQ1 3526 aa8.07□□□□□ -1.12
COL16A1-203ENST00000373672 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
COL16A1-203ENST00000373672 MYO15AQ9UKN7 3530 aa7.97□□□□□ -1.13
COL16A1-203ENST00000373672 RELNP78509 3460 aa7.94□□□□□ -1.14
COL16A1-203ENST00000373672 NBPF19A0A087WUL8 3843 aa7.9□□□□□ -1.14
COL16A1-203ENST00000373672 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
COL16A1-203ENST00000373672 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
COL16A1-203ENST00000373672 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
COL16A1-203ENST00000373672 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
COL16A1-203ENST00000373672 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
COL16A1-203ENST00000373672 DCHS1Q96JQ0 3298 aa7.82□□□□□ -1.16
COL16A1-203ENST00000373672 OTOGQ6ZRI0 2925 aa7.8□□□□□ -1.16
COL16A1-203ENST00000373672 FBN3Q75N90 2809 aa7.79□□□□□ -1.16
COL16A1-203ENST00000373672 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
COL16A1-203ENST00000373672 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
COL16A1-203ENST00000373672 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
COL16A1-203ENST00000373672 ZFHX4Q86UP3 3567 aa7.71□□□□□ -1.17
COL16A1-203ENST00000373672 FBN1P35555 2871 aaKnown RBP7.71□□□□□ -1.17
COL16A1-203ENST00000373672 ALMS1Q8TCU4 4167 aa7.67□□□□□ -1.18
COL16A1-203ENST00000373672 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
COL16A1-203ENST00000373672 CSMD1Q96PZ7 3565 aa7.66□□□□□ -1.18
COL16A1-203ENST00000373672 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
COL16A1-203ENST00000373672 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
COL16A1-203ENST00000373672 LAMA5O15230 3695 aa7.55□□□□□ -1.2
COL16A1-203ENST00000373672 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
COL16A1-203ENST00000373672 COL7A1Q02388 2944 aa7.49□□□□□ -1.21
COL16A1-203ENST00000373672 SMG1Q96Q15 3661 aaKnown RBP7.46□□□□□ -1.22
COL16A1-203ENST00000373672 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
COL16A1-203ENST00000373672 KRTAP8-1Q8IUC2 63 aa7.41□□□□□ -1.22
COL16A1-203ENST00000373672 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
COL16A1-203ENST00000373672 SVEP1Q4LDE5 3571 aa7.27□□□□□ -1.25
COL16A1-203ENST00000373672 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
COL16A1-203ENST00000373672 CUBNO60494 3623 aa7.23□□□□□ -1.25
COL16A1-203ENST00000373672 DMDP11532 3685 aa7.23□□□□□ -1.25
COL16A1-203ENST00000373672 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms