RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ADGRG4Q8IZF6 3080 aa7.55□□□□□ -1.2
LMX1B-202ENST00000373474 FREM2Q5SZK8 3169 aa7.55□□□□□ -1.2
LMX1B-202ENST00000373474 ATMQ13315 3056 aa7.55□□□□□ -1.2
LMX1B-202ENST00000373474 ITPR1Q14643 2758 aa7.54□□□□□ -1.2
LMX1B-202ENST00000373474 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
LMX1B-202ENST00000373474 MAP1AP78559 2803 aaPredicted RBP7.53□□□□□ -1.2
LMX1B-202ENST00000373474 UTP20O75691 2785 aaKnown RBP7.52□□□□□ -1.21
LMX1B-202ENST00000373474 KRTAP21-3Q3LHN1 58 aa7.52□□□□□ -1.21
LMX1B-202ENST00000373474 STAB1Q9NY15 2570 aa7.52□□□□□ -1.21
LMX1B-202ENST00000373474 BOD1L1Q8NFC6 3051 aa7.51□□□□□ -1.21
LMX1B-202ENST00000373474 NSD1Q96L73 2696 aaPredicted RBP7.51□□□□□ -1.21
LMX1B-202ENST00000373474 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
LMX1B-202ENST00000373474 FRYLO94915 3013 aa7.5□□□□□ -1.21
LMX1B-202ENST00000373474 XP32Q5T750 250 aa7.5□□□□□ -1.21
LMX1B-202ENST00000373474 REV3LO60673 3130 aa7.46□□□□□ -1.22
LMX1B-202ENST00000373474 APCP25054 2843 aa7.46□□□□□ -1.22
LMX1B-202ENST00000373474 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
LMX1B-202ENST00000373474 USP34Q70CQ2 3546 aa7.45□□□□□ -1.22
LMX1B-202ENST00000373474 COL12A1Q99715 3063 aa7.42□□□□□ -1.22
LMX1B-202ENST00000373474 BAHCC1Q9P281 2608 aa7.42□□□□□ -1.22
LMX1B-202ENST00000373474 DMXL2Q8TDJ6 3036 aa7.41□□□□□ -1.22
LMX1B-202ENST00000373474 EYSQ5T1H1 3165 aa7.4□□□□□ -1.22
LMX1B-202ENST00000373474 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.22
LMX1B-202ENST00000373474 FLNCQ14315 2725 aa7.37□□□□□ -1.23
LMX1B-202ENST00000373474 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
LMX1B-202ENST00000373474 STAB2Q8WWQ8 2551 aa7.35□□□□□ -1.23
LMX1B-202ENST00000373474 TACC2O95359 2948 aa7.33□□□□□ -1.24
LMX1B-202ENST00000373474 TPRXLQ17RH7 258 aa7.31□□□□□ -1.24
LMX1B-202ENST00000373474 CFAP47Q6ZTR5 3102 aa7.31□□□□□ -1.24
LMX1B-202ENST00000373474 HIVEP1P15822 2718 aa7.3□□□□□ -1.24
LMX1B-202ENST00000373474 SPEGQ15772 3267 aa7.29□□□□□ -1.24
LMX1B-202ENST00000373474 ASH1LQ9NR48 2969 aaKnown RBP7.27□□□□□ -1.25
LMX1B-202ENST00000373474 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
LMX1B-202ENST00000373474 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
LMX1B-202ENST00000373474 DMXL1Q9Y485 3027 aa7.2□□□□□ -1.26
LMX1B-202ENST00000373474 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
LMX1B-202ENST00000373474 LOC400499M0QZD8 3231 aa7.15□□□□□ -1.27
LMX1B-202ENST00000373474 ZANQ9Y493 2812 aa7.13□□□□□ -1.27
LMX1B-202ENST00000373474 CELSR2Q9HCU4 2923 aa7.13□□□□□ -1.27
LMX1B-202ENST00000373474 MYO15AQ9UKN7 3530 aa7.11□□□□□ -1.27
LMX1B-202ENST00000373474 CRYBG3Q68DQ2 2970 aa7.08□□□□□ -1.28
LMX1B-202ENST00000373474 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
LMX1B-202ENST00000373474 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
LMX1B-202ENST00000373474 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
LMX1B-202ENST00000373474 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
LMX1B-202ENST00000373474 FBN2P35556 2912 aa7.02□□□□□ -1.28
LMX1B-202ENST00000373474 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
LMX1B-202ENST00000373474 ASPMQ8IZT6 3477 aa6.95□□□□□ -1.3
LMX1B-202ENST00000373474 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
LMX1B-202ENST00000373474 INE1O15225 51 aa6.93□□□□□ -1.3
LMX1B-202ENST00000373474 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
LMX1B-202ENST00000373474 WDFY3Q8IZQ1 3526 aa6.93□□□□□ -1.3
LMX1B-202ENST00000373474 DCHS1Q96JQ0 3298 aa6.91□□□□□ -1.3
LMX1B-202ENST00000373474 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
LMX1B-202ENST00000373474 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
LMX1B-202ENST00000373474 RELNP78509 3460 aa6.88□□□□□ -1.31
LMX1B-202ENST00000373474 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
LMX1B-202ENST00000373474 NF1P21359 2839 aa6.86□□□□□ -1.31
LMX1B-202ENST00000373474 TGP01266 2768 aa6.85□□□□□ -1.31
LMX1B-202ENST00000373474 MXRA5Q9NR99 2828 aa6.85□□□□□ -1.31
LMX1B-202ENST00000373474 DMDP11532 3685 aa6.85□□□□□ -1.31
LMX1B-202ENST00000373474 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
LMX1B-202ENST00000373474 PDZD2O15018 2839 aa6.8□□□□□ -1.32
LMX1B-202ENST00000373474 TENM3Q9P273 2699 aa6.8□□□□□ -1.32
LMX1B-202ENST00000373474 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
LMX1B-202ENST00000373474 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
LMX1B-202ENST00000373474 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
LMX1B-202ENST00000373474 TENM2Q9NT68 2774 aa6.74□□□□□ -1.33
LMX1B-202ENST00000373474 SMG1Q96Q15 3661 aaKnown RBP6.74□□□□□ -1.33
LMX1B-202ENST00000373474 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
LMX1B-202ENST00000373474 LAMA5O15230 3695 aa6.69□□□□□ -1.34
LMX1B-202ENST00000373474 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
LMX1B-202ENST00000373474 BSNQ9UPA5 3926 aa6.62□□□□□ -1.35
LMX1B-202ENST00000373474 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
LMX1B-202ENST00000373474 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
LMX1B-202ENST00000373474 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
LMX1B-202ENST00000373474 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
LMX1B-202ENST00000373474 SVEP1Q4LDE5 3571 aa6.48□□□□□ -1.37
LMX1B-202ENST00000373474 OTOGQ6ZRI0 2925 aa6.48□□□□□ -1.37
LMX1B-202ENST00000373474 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
LMX1B-202ENST00000373474 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
LMX1B-202ENST00000373474 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
LMX1B-202ENST00000373474 ALMS1Q8TCU4 4167 aa6.41□□□□□ -1.38
LMX1B-202ENST00000373474 VWFP04275 2813 aa6.38□□□□□ -1.39
LMX1B-202ENST00000373474 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
LMX1B-202ENST00000373474 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
LMX1B-202ENST00000373474 TRRAPQ9Y4A5 3859 aa6.32□□□□□ -1.4
LMX1B-202ENST00000373474 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
LMX1B-202ENST00000373474 FBN3Q75N90 2809 aa6.26□□□□□ -1.41
LMX1B-202ENST00000373474 CSMD2Q7Z408 3487 aa6.25□□□□□ -1.41
LMX1B-202ENST00000373474 AKAP9Q99996 3911 aa6.25□□□□□ -1.41
LMX1B-202ENST00000373474 VPS13CQ709C8 3753 aa6.22□□□□□ -1.41
LMX1B-202ENST00000373474 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
LMX1B-202ENST00000373474 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
LMX1B-202ENST00000373474 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
LMX1B-202ENST00000373474 CUBNO60494 3623 aa6.15□□□□□ -1.42
LMX1B-202ENST00000373474 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
LMX1B-202ENST00000373474 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
LMX1B-202ENST00000373474 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
LMX1B-202ENST00000373474 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms