RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 PCOTHQ58A44 107 aa4.44□□□□□ -1.7
GARNL3-202ENST00000373387 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
GARNL3-202ENST00000373387 CDK2AP2O75956 126 aa4.44□□□□□ -1.7
GARNL3-202ENST00000373387 A0A087X002 238 aa4.43□□□□□ -1.7
GARNL3-202ENST00000373387 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
GARNL3-202ENST00000373387 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
GARNL3-202ENST00000373387 MRPL34Q9BQ48 92 aaKnown RBP4.43□□□□□ -1.7
GARNL3-202ENST00000373387 PKD1P98161 4303 aa4.43□□□□□ -1.7
GARNL3-202ENST00000373387 NUPR2A6NF83 97 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 NDUFS5O43920 106 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 LY6G6CO95867 125 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 LCA10Q71F78 164 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 PSORS1C2Q9UIG4 136 aa4.42□□□□□ -1.7
GARNL3-202ENST00000373387 A0A087WTM6 91 aa4.41□□□□□ -1.7
GARNL3-202ENST00000373387 HRES1P13985 223 aa4.4□□□□□ -1.7
GARNL3-202ENST00000373387 SEC61GP60059 68 aa4.4□□□□□ -1.7
GARNL3-202ENST00000373387 TGP01266 2768 aa4.4□□□□□ -1.7
GARNL3-202ENST00000373387 ZNF861PO60384 105 aa4.4□□□□□ -1.71
GARNL3-202ENST00000373387 A6NED7 52 aa4.39□□□□□ -1.71
GARNL3-202ENST00000373387 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
GARNL3-202ENST00000373387 Q5W150 140 aa4.39□□□□□ -1.71
GARNL3-202ENST00000373387 RTL8CO15255 209 aa4.38□□□□□ -1.71
GARNL3-202ENST00000373387 CDC42SE1Q9NRR8 79 aa4.38□□□□□ -1.71
GARNL3-202ENST00000373387 FAT2Q9NYQ8 4349 aa4.37□□□□□ -1.71
GARNL3-202ENST00000373387 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
GARNL3-202ENST00000373387 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
GARNL3-202ENST00000373387 A6NN06 94 aa4.37□□□□□ -1.71
GARNL3-202ENST00000373387 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
GARNL3-202ENST00000373387 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
GARNL3-202ENST00000373387 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
GARNL3-202ENST00000373387 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
GARNL3-202ENST00000373387 MEGF8Q7Z7M0 2845 aa4.34□□□□□ -1.71
GARNL3-202ENST00000373387 IGLV7-43P04211 117 aa4.33□□□□□ -1.72
GARNL3-202ENST00000373387 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
GARNL3-202ENST00000373387 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
GARNL3-202ENST00000373387 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
GARNL3-202ENST00000373387 ACYP2P14621 99 aa4.32□□□□□ -1.72
GARNL3-202ENST00000373387 SPINK7P58062 85 aa4.32□□□□□ -1.72
GARNL3-202ENST00000373387 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
GARNL3-202ENST00000373387 DMAC1Q96GE9 116 aa4.31□□□□□ -1.72
GARNL3-202ENST00000373387 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
GARNL3-202ENST00000373387 C1orf134Q5TEV5 83 aa4.3□□□□□ -1.72
GARNL3-202ENST00000373387 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
GARNL3-202ENST00000373387 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
GARNL3-202ENST00000373387 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
GARNL3-202ENST00000373387 FAM229AH3BQW9 127 aa4.29□□□□□ -1.72
GARNL3-202ENST00000373387 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
GARNL3-202ENST00000373387 LINC00313P59037 77 aa4.28□□□□□ -1.72
GARNL3-202ENST00000373387 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
GARNL3-202ENST00000373387 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
GARNL3-202ENST00000373387 C4orf48Q5BLP8 95 aa4.27□□□□□ -1.73
GARNL3-202ENST00000373387 Q6ZSA8 131 aa4.27□□□□□ -1.73
GARNL3-202ENST00000373387 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
GARNL3-202ENST00000373387 KRTAP21-3Q3LHN1 58 aa4.25□□□□□ -1.73
GARNL3-202ENST00000373387 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
GARNL3-202ENST00000373387 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
GARNL3-202ENST00000373387 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
GARNL3-202ENST00000373387 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
GARNL3-202ENST00000373387 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
GARNL3-202ENST00000373387 A0A1B0GU69 56 aa4.22□□□□□ -1.73
GARNL3-202ENST00000373387 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.73
GARNL3-202ENST00000373387 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
GARNL3-202ENST00000373387 PKHD1P08F94 4074 aa4.19□□□□□ -1.74
GARNL3-202ENST00000373387 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
GARNL3-202ENST00000373387 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
GARNL3-202ENST00000373387 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
GARNL3-202ENST00000373387 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
GARNL3-202ENST00000373387 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
GARNL3-202ENST00000373387 UQCR11O14957 56 aa4.16□□□□□ -1.74
GARNL3-202ENST00000373387 PLA2G1BP04054 148 aaKnown RBP4.16□□□□□ -1.74
GARNL3-202ENST00000373387 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
GARNL3-202ENST00000373387 SPINK1P00995 79 aa4.13□□□□□ -1.75
GARNL3-202ENST00000373387 RPS29P62273 56 aaKnown RBP4.13□□□□□ -1.75
GARNL3-202ENST00000373387 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
GARNL3-202ENST00000373387 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
GARNL3-202ENST00000373387 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
GARNL3-202ENST00000373387 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
GARNL3-202ENST00000373387 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
GARNL3-202ENST00000373387 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
GARNL3-202ENST00000373387 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
GARNL3-202ENST00000373387 SMR3BP02814 79 aaPredicted RBP4.06□□□□□ -1.76
GARNL3-202ENST00000373387 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
GARNL3-202ENST00000373387 Q8N1X5 172 aa4.06□□□□□ -1.76
GARNL3-202ENST00000373387 A8MUU9 505 aa4.06□□□□□ -1.76
GARNL3-202ENST00000373387 TNXBP22105 4242 aa4.05□□□□□ -1.76
GARNL3-202ENST00000373387 HSPG2P98160 4391 aa4.03□□□□□ -1.76
GARNL3-202ENST00000373387 H0YAA0 97 aa4.03□□□□□ -1.76
GARNL3-202ENST00000373387 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
GARNL3-202ENST00000373387 FAT1Q14517 4588 aa4.02□□□□□ -1.77
GARNL3-202ENST00000373387 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
GARNL3-202ENST00000373387 FLG2Q5D862 2391 aaPredicted RBP4□□□□□ -1.77
GARNL3-202ENST00000373387 DMBT1Q9UGM3 2413 aaPredicted RBP3.99□□□□□ -1.77
GARNL3-202ENST00000373387 CSAG1Q6PB30 78 aa3.98□□□□□ -1.77
GARNL3-202ENST00000373387 A0A1B0GVY2 172 aa3.97□□□□□ -1.77
GARNL3-202ENST00000373387 C9orf92A6NGG3 77 aa3.97□□□□□ -1.77
GARNL3-202ENST00000373387 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
GARNL3-202ENST00000373387 A0A1B0GU33 70 aa3.96□□□□□ -1.77
GARNL3-202ENST00000373387 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
GARNL3-202ENST00000373387 RYR2Q92736 4967 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms