RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 VWFP04275 2813 aa5.1□□□□□ -1.59
CSMD2-205ENST00000373381 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.6
CSMD2-205ENST00000373381 DCHS2Q6V1P9 2916 aa5.08□□□□□ -1.6
CSMD2-205ENST00000373381 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
CSMD2-205ENST00000373381 ZZEF1O43149 2961 aa5.07□□□□□ -1.6
CSMD2-205ENST00000373381 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
CSMD2-205ENST00000373381 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
CSMD2-205ENST00000373381 VPS13AQ96RL7 3174 aa5.05□□□□□ -1.6
CSMD2-205ENST00000373381 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
CSMD2-205ENST00000373381 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
CSMD2-205ENST00000373381 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
CSMD2-205ENST00000373381 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
CSMD2-205ENST00000373381 TGP01266 2768 aa5.02□□□□□ -1.61
CSMD2-205ENST00000373381 ATMQ13315 3056 aa5.01□□□□□ -1.61
CSMD2-205ENST00000373381 TENM2Q9NT68 2774 aa5.01□□□□□ -1.61
CSMD2-205ENST00000373381 KRTAP21-3Q3LHN1 58 aa4.99□□□□□ -1.61
CSMD2-205ENST00000373381 CELSR1Q9NYQ6 3014 aa4.98□□□□□ -1.61
CSMD2-205ENST00000373381 DMXL1Q9Y485 3027 aa4.96□□□□□ -1.62
CSMD2-205ENST00000373381 A0A1B0GVY2 172 aa4.95□□□□□ -1.62
CSMD2-205ENST00000373381 A6NN06 94 aa4.94□□□□□ -1.62
CSMD2-205ENST00000373381 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
CSMD2-205ENST00000373381 UTRNP46939 3433 aa4.93□□□□□ -1.62
CSMD2-205ENST00000373381 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
CSMD2-205ENST00000373381 ZANQ9Y493 2812 aa4.93□□□□□ -1.62
CSMD2-205ENST00000373381 TPRXLQ17RH7 258 aa4.92□□□□□ -1.62
CSMD2-205ENST00000373381 HTTP42858 3142 aa4.92□□□□□ -1.62
CSMD2-205ENST00000373381 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
CSMD2-205ENST00000373381 XP32Q5T750 250 aa4.87□□□□□ -1.63
CSMD2-205ENST00000373381 ADGRG4Q8IZF6 3080 aa4.86□□□□□ -1.63
CSMD2-205ENST00000373381 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
CSMD2-205ENST00000373381 KRTAP13-1Q8IUC0 172 aa4.81□□□□□ -1.64
CSMD2-205ENST00000373381 RANBP2P49792 3224 aaKnown RBP4.78□□□□□ -1.64
CSMD2-205ENST00000373381 MKI67P46013 3256 aaKnown RBP4.77□□□□□ -1.65
CSMD2-205ENST00000373381 FBN2P35556 2912 aa4.75□□□□□ -1.65
CSMD2-205ENST00000373381 FBN3Q75N90 2809 aa4.72□□□□□ -1.65
CSMD2-205ENST00000373381 CFAP47Q6ZTR5 3102 aa4.72□□□□□ -1.65
CSMD2-205ENST00000373381 MXRA5Q9NR99 2828 aa4.72□□□□□ -1.65
CSMD2-205ENST00000373381 CELSR3Q9NYQ7 3312 aa4.7□□□□□ -1.66
CSMD2-205ENST00000373381 H0YAA0 97 aa4.69□□□□□ -1.66
CSMD2-205ENST00000373381 MEGF8Q7Z7M0 2845 aa4.68□□□□□ -1.66
CSMD2-205ENST00000373381 COL6A3P12111 3177 aa4.68□□□□□ -1.66
CSMD2-205ENST00000373381 UNC80Q8N2C7 3258 aa4.67□□□□□ -1.66
CSMD2-205ENST00000373381 XIRP2A4UGR9 3374 aa4.66□□□□□ -1.66
CSMD2-205ENST00000373381 VCANP13611 3396 aa4.66□□□□□ -1.66
CSMD2-205ENST00000373381 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.66
CSMD2-205ENST00000373381 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
CSMD2-205ENST00000373381 KRTAP1-4P0C5Y4 121 aa4.62□□□□□ -1.67
CSMD2-205ENST00000373381 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
CSMD2-205ENST00000373381 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.68
CSMD2-205ENST00000373381 SPEGQ15772 3267 aa4.58□□□□□ -1.68
CSMD2-205ENST00000373381 LAMA3Q16787 3333 aa4.56□□□□□ -1.68
CSMD2-205ENST00000373381 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
CSMD2-205ENST00000373381 DNAH14Q0VDD8 3507 aa4.47□□□□□ -1.69
CSMD2-205ENST00000373381 FBN1P35555 2871 aaKnown RBP4.44□□□□□ -1.7
CSMD2-205ENST00000373381 EYSQ5T1H1 3165 aa4.42□□□□□ -1.7
CSMD2-205ENST00000373381 ZFHX4Q86UP3 3567 aa4.42□□□□□ -1.7
CSMD2-205ENST00000373381 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
CSMD2-205ENST00000373381 SZT2Q5T011 3432 aa4.37□□□□□ -1.71
CSMD2-205ENST00000373381 INE1O15225 51 aa4.36□□□□□ -1.71
CSMD2-205ENST00000373381 ZFHX3Q15911 3703 aa4.35□□□□□ -1.71
CSMD2-205ENST00000373381 USP34Q70CQ2 3546 aa4.34□□□□□ -1.71
CSMD2-205ENST00000373381 HRNRQ86YZ3 2850 aaPredicted RBP4.33□□□□□ -1.72
CSMD2-205ENST00000373381 OTOGQ6ZRI0 2925 aa4.32□□□□□ -1.72
CSMD2-205ENST00000373381 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
CSMD2-205ENST00000373381 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
CSMD2-205ENST00000373381 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
CSMD2-205ENST00000373381 KRTAP10-6P60371 365 aaPredicted RBP4.25□□□□□ -1.73
CSMD2-205ENST00000373381 BRCA2P51587 3418 aa4.24□□□□□ -1.73
CSMD2-205ENST00000373381 MYO15AQ9UKN7 3530 aa4.15□□□□□ -1.75
CSMD2-205ENST00000373381 DCHS1Q96JQ0 3298 aa4.12□□□□□ -1.75
CSMD2-205ENST00000373381 LOC400499M0QZD8 3231 aa4.11□□□□□ -1.75
CSMD2-205ENST00000373381 SPTBN5Q9NRC6 3674 aaKnown RBP4.08□□□□□ -1.76
CSMD2-205ENST00000373381 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
CSMD2-205ENST00000373381 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
CSMD2-205ENST00000373381 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
CSMD2-205ENST00000373381 CDH23Q9H251 3354 aa4.04□□□□□ -1.76
CSMD2-205ENST00000373381 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
CSMD2-205ENST00000373381 LORP23490 312 aaPredicted RBP3.98□□□□□ -1.77
CSMD2-205ENST00000373381 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
CSMD2-205ENST00000373381 TRRAPQ9Y4A5 3859 aa3.94□□□□□ -1.78
CSMD2-205ENST00000373381 DMDP11532 3685 aa3.9□□□□□ -1.79
CSMD2-205ENST00000373381 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
CSMD2-205ENST00000373381 WDFY3Q8IZQ1 3526 aa3.88□□□□□ -1.79
CSMD2-205ENST00000373381 SPENQ96T58 3664 aaKnown RBP3.86□□□□□ -1.79
CSMD2-205ENST00000373381 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
CSMD2-205ENST00000373381 ASPMQ8IZT6 3477 aa3.84□□□□□ -1.8
CSMD2-205ENST00000373381 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
CSMD2-205ENST00000373381 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
CSMD2-205ENST00000373381 AKAP9Q99996 3911 aa3.81□□□□□ -1.8
CSMD2-205ENST00000373381 LAMA5O15230 3695 aa3.81□□□□□ -1.8
CSMD2-205ENST00000373381 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
CSMD2-205ENST00000373381 ALMS1Q8TCU4 4167 aa3.74□□□□□ -1.81
CSMD2-205ENST00000373381 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
CSMD2-205ENST00000373381 SMG1Q96Q15 3661 aaKnown RBP3.72□□□□□ -1.81
CSMD2-205ENST00000373381 KRTAP3-2Q9BYR7 98 aa3.72□□□□□ -1.81
CSMD2-205ENST00000373381 RELNP78509 3460 aa3.72□□□□□ -1.81
CSMD2-205ENST00000373381 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
CSMD2-205ENST00000373381 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
CSMD2-205ENST00000373381 KRTAP4-5Q9BYR2 181 aa3.68□□□□□ -1.82
CSMD2-205ENST00000373381 MUC3AQ02505 3323 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 231.6 ms