RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
UBR2-201ENST00000372899 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
UBR2-201ENST00000372899 COL6A3P12111 3177 aa7.66□□□□□ -1.18
UBR2-201ENST00000372899 FRYQ5TBA9 3013 aa7.64□□□□□ -1.19
UBR2-201ENST00000372899 FRYLO94915 3013 aa7.6□□□□□ -1.19
UBR2-201ENST00000372899 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
UBR2-201ENST00000372899 REV3LO60673 3130 aa7.6□□□□□ -1.19
UBR2-201ENST00000372899 NBEAL2Q6ZNJ1 2754 aa7.59□□□□□ -1.19
UBR2-201ENST00000372899 NSD1Q96L73 2696 aaPredicted RBP7.57□□□□□ -1.2
UBR2-201ENST00000372899 EYSQ5T1H1 3165 aa7.57□□□□□ -1.2
UBR2-201ENST00000372899 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
UBR2-201ENST00000372899 TNRC18O15417 2968 aaPredicted RBP7.55□□□□□ -1.2
UBR2-201ENST00000372899 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
UBR2-201ENST00000372899 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
UBR2-201ENST00000372899 SPEGQ15772 3267 aa7.5□□□□□ -1.21
UBR2-201ENST00000372899 DMXL2Q8TDJ6 3036 aa7.47□□□□□ -1.21
UBR2-201ENST00000372899 FLNCQ14315 2725 aa7.46□□□□□ -1.22
UBR2-201ENST00000372899 ADGRG4Q8IZF6 3080 aa7.44□□□□□ -1.22
UBR2-201ENST00000372899 FREM2Q5SZK8 3169 aa7.43□□□□□ -1.22
UBR2-201ENST00000372899 H0YAA0 97 aa7.38□□□□□ -1.23
UBR2-201ENST00000372899 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
UBR2-201ENST00000372899 DMXL1Q9Y485 3027 aa7.37□□□□□ -1.23
UBR2-201ENST00000372899 UTP20O75691 2785 aaKnown RBP7.37□□□□□ -1.23
UBR2-201ENST00000372899 ATMQ13315 3056 aa7.37□□□□□ -1.23
UBR2-201ENST00000372899 UBR5O95071 2799 aaPredicted RBP7.36□□□□□ -1.23
UBR2-201ENST00000372899 LRBAP50851 2863 aa7.36□□□□□ -1.23
UBR2-201ENST00000372899 KALRNO60229 2985 aa7.35□□□□□ -1.23
UBR2-201ENST00000372899 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
UBR2-201ENST00000372899 USP34Q70CQ2 3546 aa7.34□□□□□ -1.23
UBR2-201ENST00000372899 MYO15AQ9UKN7 3530 aa7.33□□□□□ -1.24
UBR2-201ENST00000372899 COL12A1Q99715 3063 aa7.32□□□□□ -1.24
UBR2-201ENST00000372899 TACC2O95359 2948 aa7.31□□□□□ -1.24
UBR2-201ENST00000372899 LOC400499M0QZD8 3231 aa7.3□□□□□ -1.24
UBR2-201ENST00000372899 ZZEF1O43149 2961 aa7.27□□□□□ -1.25
UBR2-201ENST00000372899 CFAP47Q6ZTR5 3102 aa7.26□□□□□ -1.25
UBR2-201ENST00000372899 ITPR1Q14643 2758 aa7.26□□□□□ -1.25
UBR2-201ENST00000372899 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
UBR2-201ENST00000372899 TENM1Q9UKZ4 2725 aa7.21□□□□□ -1.25
UBR2-201ENST00000372899 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
UBR2-201ENST00000372899 HIVEP1P15822 2718 aa7.17□□□□□ -1.26
UBR2-201ENST00000372899 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
UBR2-201ENST00000372899 ZANQ9Y493 2812 aa7.13□□□□□ -1.27
UBR2-201ENST00000372899 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
UBR2-201ENST00000372899 WDFY3Q8IZQ1 3526 aa7.08□□□□□ -1.28
UBR2-201ENST00000372899 MUC3AQ02505 3323 aa7.07□□□□□ -1.28
UBR2-201ENST00000372899 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
UBR2-201ENST00000372899 HRNRQ86YZ3 2850 aaPredicted RBP7.05□□□□□ -1.28
UBR2-201ENST00000372899 NF1P21359 2839 aa7.01□□□□□ -1.29
UBR2-201ENST00000372899 DMDP11532 3685 aa6.98□□□□□ -1.29
UBR2-201ENST00000372899 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
UBR2-201ENST00000372899 LAMA5O15230 3695 aa6.96□□□□□ -1.29
UBR2-201ENST00000372899 CELSR2Q9HCU4 2923 aa6.96□□□□□ -1.3
UBR2-201ENST00000372899 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
UBR2-201ENST00000372899 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
UBR2-201ENST00000372899 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
UBR2-201ENST00000372899 FBN2P35556 2912 aa6.92□□□□□ -1.3
UBR2-201ENST00000372899 TGP01266 2768 aa6.9□□□□□ -1.3
UBR2-201ENST00000372899 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.3
UBR2-201ENST00000372899 ASPMQ8IZT6 3477 aa6.89□□□□□ -1.31
UBR2-201ENST00000372899 RELNP78509 3460 aa6.89□□□□□ -1.31
UBR2-201ENST00000372899 CELSR1Q9NYQ6 3014 aa6.88□□□□□ -1.31
UBR2-201ENST00000372899 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
UBR2-201ENST00000372899 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
UBR2-201ENST00000372899 DCHS1Q96JQ0 3298 aa6.82□□□□□ -1.32
UBR2-201ENST00000372899 PDZD2O15018 2839 aa6.77□□□□□ -1.32
UBR2-201ENST00000372899 ZFHX4Q86UP3 3567 aa6.76□□□□□ -1.33
UBR2-201ENST00000372899 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
UBR2-201ENST00000372899 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
UBR2-201ENST00000372899 INE1O15225 51 aa6.64□□□□□ -1.35
UBR2-201ENST00000372899 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
UBR2-201ENST00000372899 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
UBR2-201ENST00000372899 VWFP04275 2813 aa6.6□□□□□ -1.35
UBR2-201ENST00000372899 SPENQ96T58 3664 aaKnown RBP6.55□□□□□ -1.36
UBR2-201ENST00000372899 CSMD1Q96PZ7 3565 aa6.54□□□□□ -1.36
UBR2-201ENST00000372899 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
UBR2-201ENST00000372899 SVEP1Q4LDE5 3571 aa6.46□□□□□ -1.38
UBR2-201ENST00000372899 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
UBR2-201ENST00000372899 BSNQ9UPA5 3926 aa6.42□□□□□ -1.38
UBR2-201ENST00000372899 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
UBR2-201ENST00000372899 ZFHX3Q15911 3703 aa6.38□□□□□ -1.39
UBR2-201ENST00000372899 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
UBR2-201ENST00000372899 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
UBR2-201ENST00000372899 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
UBR2-201ENST00000372899 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
UBR2-201ENST00000372899 CUBNO60494 3623 aa6.3□□□□□ -1.4
UBR2-201ENST00000372899 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
UBR2-201ENST00000372899 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
UBR2-201ENST00000372899 CSMD2Q7Z408 3487 aa6.24□□□□□ -1.41
UBR2-201ENST00000372899 MEGF8Q7Z7M0 2845 aa6.21□□□□□ -1.42
UBR2-201ENST00000372899 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
UBR2-201ENST00000372899 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
UBR2-201ENST00000372899 TRRAPQ9Y4A5 3859 aa6.13□□□□□ -1.43
UBR2-201ENST00000372899 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
UBR2-201ENST00000372899 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
UBR2-201ENST00000372899 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
UBR2-201ENST00000372899 VPS13CQ709C8 3753 aa6.08□□□□□ -1.44
UBR2-201ENST00000372899 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
UBR2-201ENST00000372899 SRRM2Q9UQ35 2752 aaKnown RBP6.06□□□□□ -1.44
UBR2-201ENST00000372899 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
UBR2-201ENST00000372899 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms