RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
CTPS1-202ENST00000372621 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
CTPS1-202ENST00000372621 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
CTPS1-202ENST00000372621 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
CTPS1-202ENST00000372621 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
CTPS1-202ENST00000372621 DNAH5Q8TE73 4624 aa7.52□□□□□ -1.21
CTPS1-202ENST00000372621 NDUFS5O43920 106 aa7.52□□□□□ -1.21
CTPS1-202ENST00000372621 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
CTPS1-202ENST00000372621 MEGF8Q7Z7M0 2845 aa7.5□□□□□ -1.21
CTPS1-202ENST00000372621 TGP01266 2768 aa7.48□□□□□ -1.21
CTPS1-202ENST00000372621 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
CTPS1-202ENST00000372621 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
CTPS1-202ENST00000372621 C1orf134Q5TEV5 83 aa7.47□□□□□ -1.21
CTPS1-202ENST00000372621 PRR15LQ9BU68 103 aa7.46□□□□□ -1.21
CTPS1-202ENST00000372621 A8MU10 97 aa7.46□□□□□ -1.22
CTPS1-202ENST00000372621 Q5W150 140 aa7.45□□□□□ -1.22
CTPS1-202ENST00000372621 Q75L30 129 aa7.44□□□□□ -1.22
CTPS1-202ENST00000372621 CHKB-CPT1BH3BT56 60 aa7.44□□□□□ -1.22
CTPS1-202ENST00000372621 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
CTPS1-202ENST00000372621 HRES1P13985 223 aa7.44□□□□□ -1.22
CTPS1-202ENST00000372621 CIRBP-AS1Q8TBR5 109 aa7.44□□□□□ -1.22
CTPS1-202ENST00000372621 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
CTPS1-202ENST00000372621 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
CTPS1-202ENST00000372621 PKD1P98161 4303 aa7.39□□□□□ -1.23
CTPS1-202ENST00000372621 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
CTPS1-202ENST00000372621 DNHD1Q96M86 4753 aa7.39□□□□□ -1.23
CTPS1-202ENST00000372621 SPAG11AQ6PDA7 123 aa7.39□□□□□ -1.23
CTPS1-202ENST00000372621 LRP1BQ9NZR2 4599 aa7.38□□□□□ -1.23
CTPS1-202ENST00000372621 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
CTPS1-202ENST00000372621 LCA10Q71F78 164 aa7.37□□□□□ -1.23
CTPS1-202ENST00000372621 FAT2Q9NYQ8 4349 aa7.36□□□□□ -1.23
CTPS1-202ENST00000372621 LY6G6CO95867 125 aa7.36□□□□□ -1.23
CTPS1-202ENST00000372621 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
CTPS1-202ENST00000372621 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
CTPS1-202ENST00000372621 A6NED7 52 aa7.33□□□□□ -1.24
CTPS1-202ENST00000372621 LINC00313P59037 77 aa7.33□□□□□ -1.24
CTPS1-202ENST00000372621 Q6ZSA8 131 aa7.33□□□□□ -1.24
CTPS1-202ENST00000372621 HYDINQ4G0P3 5121 aa7.32□□□□□ -1.24
CTPS1-202ENST00000372621 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
CTPS1-202ENST00000372621 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
CTPS1-202ENST00000372621 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
CTPS1-202ENST00000372621 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 ACYP2P14621 99 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
CTPS1-202ENST00000372621 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.24
CTPS1-202ENST00000372621 IGKV2-30P06310 120 aa7.26□□□□□ -1.25
CTPS1-202ENST00000372621 SPINK7P58062 85 aa7.26□□□□□ -1.25
CTPS1-202ENST00000372621 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
CTPS1-202ENST00000372621 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
CTPS1-202ENST00000372621 A6NN06 94 aa7.22□□□□□ -1.25
CTPS1-202ENST00000372621 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
CTPS1-202ENST00000372621 SEC61GP60059 68 aa7.17□□□□□ -1.26
CTPS1-202ENST00000372621 PKHD1P08F94 4074 aa7.14□□□□□ -1.27
CTPS1-202ENST00000372621 PLA2G1BP04054 148 aaKnown RBP7.14□□□□□ -1.27
CTPS1-202ENST00000372621 SACSQ9NZJ4 4579 aa7.14□□□□□ -1.27
CTPS1-202ENST00000372621 SPINK1P00995 79 aa7.13□□□□□ -1.27
CTPS1-202ENST00000372621 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
CTPS1-202ENST00000372621 IGKV2D-30A0A075B6S6 120 aa7.11□□□□□ -1.27
CTPS1-202ENST00000372621 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
CTPS1-202ENST00000372621 A0A1B0GU69 56 aa7.09□□□□□ -1.27
CTPS1-202ENST00000372621 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
CTPS1-202ENST00000372621 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
CTPS1-202ENST00000372621 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
CTPS1-202ENST00000372621 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
CTPS1-202ENST00000372621 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
CTPS1-202ENST00000372621 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.29
CTPS1-202ENST00000372621 APOBP04114 4563 aaKnown RBP7□□□□□ -1.29
CTPS1-202ENST00000372621 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
CTPS1-202ENST00000372621 UQCR11O14957 56 aa6.98□□□□□ -1.29
CTPS1-202ENST00000372621 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.29
CTPS1-202ENST00000372621 Q8N1X5 172 aa6.96□□□□□ -1.3
CTPS1-202ENST00000372621 FAT1Q14517 4588 aa6.95□□□□□ -1.3
CTPS1-202ENST00000372621 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
CTPS1-202ENST00000372621 A8MUU9 505 aa6.93□□□□□ -1.3
CTPS1-202ENST00000372621 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
CTPS1-202ENST00000372621 SMR3BP02814 79 aaPredicted RBP6.92□□□□□ -1.3
CTPS1-202ENST00000372621 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
CTPS1-202ENST00000372621 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
CTPS1-202ENST00000372621 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
CTPS1-202ENST00000372621 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
CTPS1-202ENST00000372621 KRTAP21-3Q3LHN1 58 aa6.84□□□□□ -1.31
CTPS1-202ENST00000372621 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
CTPS1-202ENST00000372621 RYR2Q92736 4967 aa6.8□□□□□ -1.32
CTPS1-202ENST00000372621 TNXBP22105 4242 aa6.77□□□□□ -1.32
CTPS1-202ENST00000372621 H0YAA0 97 aa6.77□□□□□ -1.33
CTPS1-202ENST00000372621 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
CTPS1-202ENST00000372621 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
CTPS1-202ENST00000372621 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
CTPS1-202ENST00000372621 A0A1B0GU33 70 aa6.71□□□□□ -1.34
CTPS1-202ENST00000372621 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
CTPS1-202ENST00000372621 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
CTPS1-202ENST00000372621 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
CTPS1-202ENST00000372621 HSPG2P98160 4391 aa6.67□□□□□ -1.34
CTPS1-202ENST00000372621 CSAG1Q6PB30 78 aa6.65□□□□□ -1.35
CTPS1-202ENST00000372621 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
CTPS1-202ENST00000372621 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
CTPS1-202ENST00000372621 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms