RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PRR4Q16378 134 aa9.1□□□□□ -0.95
PFDN4-201ENST00000371419 CD164Q04900 197 aa9.09□□□□□ -0.95
PFDN4-201ENST00000371419 HRCT1Q6UXD1 115 aa9.09□□□□□ -0.95
PFDN4-201ENST00000371419 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
PFDN4-201ENST00000371419 A0A0G2JQZ4 141 aa9.08□□□□□ -0.96
PFDN4-201ENST00000371419 A0A087WSZ3 146 aa9.07□□□□□ -0.96
PFDN4-201ENST00000371419 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
PFDN4-201ENST00000371419 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
PFDN4-201ENST00000371419 SMIM20Q8N5G0 67 aa9.02□□□□□ -0.96
PFDN4-201ENST00000371419 UQCRQO14949 82 aa9.02□□□□□ -0.97
PFDN4-201ENST00000371419 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
PFDN4-201ENST00000371419 SERP2Q8N6R1 65 aa9.02□□□□□ -0.97
PFDN4-201ENST00000371419 COX7CP15954 63 aa9.01□□□□□ -0.97
PFDN4-201ENST00000371419 IGLV7-46A0A075B6I9 117 aa9□□□□□ -0.97
PFDN4-201ENST00000371419 LRP2P98164 4655 aa9□□□□□ -0.97
PFDN4-201ENST00000371419 Q5XG85 94 aa9□□□□□ -0.97
PFDN4-201ENST00000371419 DSCR10P59022 87 aa8.99□□□□□ -0.97
PFDN4-201ENST00000371419 SS18L2Q9UHA2 77 aa8.99□□□□□ -0.97
PFDN4-201ENST00000371419 CCDC179H3BU77 68 aa8.98□□□□□ -0.97
PFDN4-201ENST00000371419 Q8N9L7 120 aa8.98□□□□□ -0.97
PFDN4-201ENST00000371419 LPAP08519 4548 aa8.97□□□□□ -0.97
PFDN4-201ENST00000371419 J3KT08 172 aa8.96□□□□□ -0.98
PFDN4-201ENST00000371419 LINC00472Q9H8W2 130 aa8.96□□□□□ -0.98
PFDN4-201ENST00000371419 TRAV7A0A075B6U4 112 aa8.95□□□□□ -0.98
PFDN4-201ENST00000371419 K7EQZ3 153 aa8.93□□□□□ -0.98
PFDN4-201ENST00000371419 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
PFDN4-201ENST00000371419 A8MWP4 228 aa8.9□□□□□ -0.98
PFDN4-201ENST00000371419 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
PFDN4-201ENST00000371419 C1orf195Q5TG92 126 aa8.9□□□□□ -0.98
PFDN4-201ENST00000371419 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
PFDN4-201ENST00000371419 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
PFDN4-201ENST00000371419 NDUFB1O75438 58 aa8.88□□□□□ -0.99
PFDN4-201ENST00000371419 KRTAP13-3Q3SY46 172 aa8.87□□□□□ -0.99
PFDN4-201ENST00000371419 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
PFDN4-201ENST00000371419 Q96NJ1 140 aa8.85□□□□□ -0.99
PFDN4-201ENST00000371419 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
PFDN4-201ENST00000371419 UBR4Q5T4S7 5183 aa8.84□□□□□ -0.99
PFDN4-201ENST00000371419 CASC2Q6XLA1 102 aa8.78□□□□□ -1
PFDN4-201ENST00000371419 WFDC13Q8IUB5 93 aa8.78□□□□□ -1
PFDN4-201ENST00000371419 C20orf197Q8N268 126 aa8.78□□□□□ -1
PFDN4-201ENST00000371419 KLKP1Q107X0 134 aa8.77□□□□□ -1.01
PFDN4-201ENST00000371419 A0A1B0GVX0 72 aa8.76□□□□□ -1.01
PFDN4-201ENST00000371419 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
PFDN4-201ENST00000371419 MMP24-AS1A0A0U1RRL7 71 aa8.74□□□□□ -1.01
PFDN4-201ENST00000371419 XP32Q5T750 250 aa8.73□□□□□ -1.01
PFDN4-201ENST00000371419 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
PFDN4-201ENST00000371419 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
PFDN4-201ENST00000371419 C8orf17Q9NRJ1 99 aa8.72□□□□□ -1.01
PFDN4-201ENST00000371419 hDV103S1A0JD37 113 aa8.71□□□□□ -1.01
PFDN4-201ENST00000371419 NDUFC1O43677 76 aa8.71□□□□□ -1.01
PFDN4-201ENST00000371419 TMEM258P61165 79 aa8.71□□□□□ -1.01
PFDN4-201ENST00000371419 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
PFDN4-201ENST00000371419 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
PFDN4-201ENST00000371419 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
PFDN4-201ENST00000371419 SNURFQ9Y675 71 aa8.68□□□□□ -1.02
PFDN4-201ENST00000371419 MUC17Q685J3 4493 aa8.67□□□□□ -1.02
PFDN4-201ENST00000371419 C8orf87E5RJ46 101 aa8.67□□□□□ -1.02
PFDN4-201ENST00000371419 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
PFDN4-201ENST00000371419 SEC61BP60468 96 aaKnown RBP8.65□□□□□ -1.02
PFDN4-201ENST00000371419 MP68P56378 58 aa8.64□□□□□ -1.03
PFDN4-201ENST00000371419 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
PFDN4-201ENST00000371419 H7BZZ5 65 aa8.64□□□□□ -1.03
PFDN4-201ENST00000371419 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
PFDN4-201ENST00000371419 H3BPC8 53 aa8.63□□□□□ -1.03
PFDN4-201ENST00000371419 H0Y9P7 68 aa8.58□□□□□ -1.04
PFDN4-201ENST00000371419 LINC00313P59037 77 aa8.58□□□□□ -1.04
PFDN4-201ENST00000371419 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
PFDN4-201ENST00000371419 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
PFDN4-201ENST00000371419 FAM236DA0A1B0GTK5 79 aa8.57□□□□□ -1.04
PFDN4-201ENST00000371419 FAM236CP0DP71 79 aa8.57□□□□□ -1.04
PFDN4-201ENST00000371419 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
PFDN4-201ENST00000371419 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
PFDN4-201ENST00000371419 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
PFDN4-201ENST00000371419 NDUFS5O43920 106 aa8.56□□□□□ -1.04
PFDN4-201ENST00000371419 MUC2Q02817 5179 aa8.55□□□□□ -1.04
PFDN4-201ENST00000371419 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
PFDN4-201ENST00000371419 LINC00208Q96KT6 92 aa8.54□□□□□ -1.04
PFDN4-201ENST00000371419 Q75L30 129 aa8.53□□□□□ -1.04
PFDN4-201ENST00000371419 RPS28P62857 69 aaKnown RBP8.51□□□□□ -1.05
PFDN4-201ENST00000371419 C20orf166-AS1Q96NR2 134 aa8.51□□□□□ -1.05
PFDN4-201ENST00000371419 A8MUU9 505 aa8.5□□□□□ -1.05
PFDN4-201ENST00000371419 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
PFDN4-201ENST00000371419 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
PFDN4-201ENST00000371419 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
PFDN4-201ENST00000371419 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
PFDN4-201ENST00000371419 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
PFDN4-201ENST00000371419 SERP1Q9Y6X1 66 aa8.45□□□□□ -1.06
PFDN4-201ENST00000371419 LOC101927531A0A1B0GV80 90 aa8.4□□□□□ -1.06
PFDN4-201ENST00000371419 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
PFDN4-201ENST00000371419 Q5W150 140 aa8.38□□□□□ -1.07
PFDN4-201ENST00000371419 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
PFDN4-201ENST00000371419 FAT4Q6V0I7 4981 aa8.31□□□□□ -1.08
PFDN4-201ENST00000371419 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
PFDN4-201ENST00000371419 H3BS24 57 aa8.29□□□□□ -1.08
PFDN4-201ENST00000371419 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
PFDN4-201ENST00000371419 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
PFDN4-201ENST00000371419 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
PFDN4-201ENST00000371419 IGKV2D-30A0A075B6S6 120 aa8.17□□□□□ -1.1
PFDN4-201ENST00000371419 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
PFDN4-201ENST00000371419 HRES1P13985 223 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms