RNA–Protein interactions for RNA: ENST00000371117.7

PKHD1-202, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKHD1, Length 16,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-202ENST00000371117 LRBAP50851 2863 aa2.74□□□□□ -1.97
PKHD1-202ENST00000371117 APCP25054 2843 aa2.74□□□□□ -1.97
PKHD1-202ENST00000371117 SZT2Q5T011 3432 aa2.74□□□□□ -1.97
PKHD1-202ENST00000371117 HIVEP1P15822 2718 aa2.73□□□□□ -1.97
PKHD1-202ENST00000371117 ADGRG4Q8IZF6 3080 aa2.73□□□□□ -1.97
PKHD1-202ENST00000371117 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
PKHD1-202ENST00000371117 CDH23Q9H251 3354 aa2.73□□□□□ -1.97
PKHD1-202ENST00000371117 TACC2O95359 2948 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 KRTAP1-3Q8IUG1 177 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 COL12A1Q99715 3063 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 UNC80Q8N2C7 3258 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 H0YAA0 97 aa2.72□□□□□ -1.97
PKHD1-202ENST00000371117 KRTAP1-1Q07627 177 aa2.71□□□□□ -1.97
PKHD1-202ENST00000371117 WDFY4Q6ZS81 3184 aa2.71□□□□□ -1.98
PKHD1-202ENST00000371117 LAMA1P25391 3075 aa2.71□□□□□ -1.98
PKHD1-202ENST00000371117 TENM1Q9UKZ4 2725 aa2.71□□□□□ -1.98
PKHD1-202ENST00000371117 COL6A3P12111 3177 aa2.7□□□□□ -1.98
PKHD1-202ENST00000371117 TENM4Q6N022 2769 aa2.69□□□□□ -1.98
PKHD1-202ENST00000371117 PKD1L1Q8TDX9 2849 aa2.69□□□□□ -1.98
PKHD1-202ENST00000371117 DMXL1Q9Y485 3027 aa2.68□□□□□ -1.98
PKHD1-202ENST00000371117 ZZEF1O43149 2961 aa2.68□□□□□ -1.98
PKHD1-202ENST00000371117 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
PKHD1-202ENST00000371117 BOD1L1Q8NFC6 3051 aa2.68□□□□□ -1.98
PKHD1-202ENST00000371117 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
PKHD1-202ENST00000371117 SPTBN5Q9NRC6 3674 aaKnown RBP2.66□□□□□ -1.98
PKHD1-202ENST00000371117 ATMQ13315 3056 aa2.64□□□□□ -1.99
PKHD1-202ENST00000371117 CELSR3Q9NYQ7 3312 aa2.63□□□□□ -1.99
PKHD1-202ENST00000371117 EYSQ5T1H1 3165 aa2.63□□□□□ -1.99
PKHD1-202ENST00000371117 TGP01266 2768 aa2.62□□□□□ -1.99
PKHD1-202ENST00000371117 VCANP13611 3396 aa2.61□□□□□ -1.99
PKHD1-202ENST00000371117 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
PKHD1-202ENST00000371117 VWFP04275 2813 aa2.61□□□□□ -1.99
PKHD1-202ENST00000371117 KRTAP10-1P60331 282 aa2.61□□□□□ -1.99
PKHD1-202ENST00000371117 Q6ZRN7 208 aaPredicted RBP2.6□□□□□ -1.99
PKHD1-202ENST00000371117 KRTAP10-2P60368 255 aa2.59□□□□□ -1.99
PKHD1-202ENST00000371117 DNAH14Q0VDD8 3507 aa2.59□□□□□ -1.99
PKHD1-202ENST00000371117 KRTAP15-1Q3LI76 137 aa2.59□□□□□ -2
PKHD1-202ENST00000371117 KRTAP10-8P60410 259 aa2.57□□□□□ -2
PKHD1-202ENST00000371117 ZANQ9Y493 2812 aa2.56□□□□□ -2
PKHD1-202ENST00000371117 KRTAP1-5Q9BYS1 174 aa2.56□□□□□ -2
PKHD1-202ENST00000371117 CELSR1Q9NYQ6 3014 aa2.55□□□□□ -2
PKHD1-202ENST00000371117 TENM2Q9NT68 2774 aa2.54□□□□□ -2
PKHD1-202ENST00000371117 USP34Q70CQ2 3546 aa2.54□□□□□ -2
PKHD1-202ENST00000371117 MXRA5Q9NR99 2828 aa2.54□□□□□ -2
PKHD1-202ENST00000371117 SPEGQ15772 3267 aa2.53□□□□□ -2
PKHD1-202ENST00000371117 TPRXLQ17RH7 258 aa2.53□□□□□ -2.01
PKHD1-202ENST00000371117 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
PKHD1-202ENST00000371117 KRTAP7-1Q8IUC3 87 aa2.51□□□□□ -2.01
PKHD1-202ENST00000371117 KRTAP13-3Q3SY46 172 aa2.5□□□□□ -2.01
PKHD1-202ENST00000371117 FBN2P35556 2912 aa2.5□□□□□ -2.01
PKHD1-202ENST00000371117 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
PKHD1-202ENST00000371117 KRTAP21-3Q3LHN1 58 aa2.48□□□□□ -2.01
PKHD1-202ENST00000371117 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
PKHD1-202ENST00000371117 WDFY3Q8IZQ1 3526 aa2.48□□□□□ -2.01
PKHD1-202ENST00000371117 HRNRQ86YZ3 2850 aaPredicted RBP2.47□□□□□ -2.01
PKHD1-202ENST00000371117 MYO15AQ9UKN7 3530 aa2.47□□□□□ -2.01
PKHD1-202ENST00000371117 LOC400499M0QZD8 3231 aa2.46□□□□□ -2.02
PKHD1-202ENST00000371117 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.02
PKHD1-202ENST00000371117 XP32Q5T750 250 aa2.45□□□□□ -2.02
PKHD1-202ENST00000371117 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
PKHD1-202ENST00000371117 NBPF19A0A087WUL8 3843 aa2.45□□□□□ -2.02
PKHD1-202ENST00000371117 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
PKHD1-202ENST00000371117 DMDP11532 3685 aa2.42□□□□□ -2.02
PKHD1-202ENST00000371117 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
PKHD1-202ENST00000371117 LAMA5O15230 3695 aa2.41□□□□□ -2.02
PKHD1-202ENST00000371117 FBN3Q75N90 2809 aa2.4□□□□□ -2.02
PKHD1-202ENST00000371117 OTOGQ6ZRI0 2925 aa2.4□□□□□ -2.03
PKHD1-202ENST00000371117 AKAP9Q99996 3911 aa2.4□□□□□ -2.03
PKHD1-202ENST00000371117 DCHS1Q96JQ0 3298 aa2.39□□□□□ -2.03
PKHD1-202ENST00000371117 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
PKHD1-202ENST00000371117 ASPMQ8IZT6 3477 aa2.39□□□□□ -2.03
PKHD1-202ENST00000371117 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
PKHD1-202ENST00000371117 ZFHX3Q15911 3703 aa2.36□□□□□ -2.03
PKHD1-202ENST00000371117 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
PKHD1-202ENST00000371117 HUWE1Q7Z6Z7 4374 aaKnown RBP2.36□□□□□ -2.03
PKHD1-202ENST00000371117 A0A1B0GVY2 172 aa2.35□□□□□ -2.03
PKHD1-202ENST00000371117 SPENQ96T58 3664 aaKnown RBP2.35□□□□□ -2.03
PKHD1-202ENST00000371117 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
PKHD1-202ENST00000371117 RELNP78509 3460 aa2.32□□□□□ -2.04
PKHD1-202ENST00000371117 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
PKHD1-202ENST00000371117 SMG1Q96Q15 3661 aaKnown RBP2.32□□□□□ -2.04
PKHD1-202ENST00000371117 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
PKHD1-202ENST00000371117 ZFHX4Q86UP3 3567 aa2.3□□□□□ -2.04
PKHD1-202ENST00000371117 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
PKHD1-202ENST00000371117 CMYA5Q8N3K9 4069 aa2.26□□□□□ -2.05
PKHD1-202ENST00000371117 KRTAP3-1Q9BYR8 98 aa2.24□□□□□ -2.05
PKHD1-202ENST00000371117 CSMD1Q96PZ7 3565 aa2.24□□□□□ -2.05
PKHD1-202ENST00000371117 DNAH6Q9C0G6 4158 aa2.22□□□□□ -2.05
PKHD1-202ENST00000371117 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
PKHD1-202ENST00000371117 ANK2Q01484 3957 aa2.21□□□□□ -2.06
PKHD1-202ENST00000371117 KRTAP3-2Q9BYR7 98 aa2.21□□□□□ -2.06
PKHD1-202ENST00000371117 VPS13CQ709C8 3753 aa2.21□□□□□ -2.06
PKHD1-202ENST00000371117 DNAH3Q8TD57 4116 aa2.2□□□□□ -2.06
PKHD1-202ENST00000371117 TRRAPQ9Y4A5 3859 aa2.19□□□□□ -2.06
PKHD1-202ENST00000371117 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
PKHD1-202ENST00000371117 DNAH10Q8IVF4 4471 aa2.18□□□□□ -2.06
PKHD1-202ENST00000371117 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
PKHD1-202ENST00000371117 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.06
PKHD1-202ENST00000371117 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms