RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
VAV3-202ENST00000370056 FLG2Q5D862 2391 aaPredicted RBP12.46□□□□□ -0.41
VAV3-202ENST00000370056 LOC400499M0QZD8 3231 aa12.44□□□□□ -0.42
VAV3-202ENST00000370056 DCHS2Q6V1P9 2916 aa12.43□□□□□ -0.42
VAV3-202ENST00000370056 CAMK2N1Q7Z7J9 78 aa12.42□□□□□ -0.42
VAV3-202ENST00000370056 RPS29P62273 56 aaKnown RBP12.37□□□□□ -0.43
VAV3-202ENST00000370056 H1FX-AS1Q4G0G2 97 aa12.36□□□□□ -0.43
VAV3-202ENST00000370056 SEC61BP60468 96 aaKnown RBP12.35□□□□□ -0.43
VAV3-202ENST00000370056 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
VAV3-202ENST00000370056 NF1P21359 2839 aa12.33□□□□□ -0.44
VAV3-202ENST00000370056 KRTAP13-2Q52LG2 175 aa12.32□□□□□ -0.44
VAV3-202ENST00000370056 TENM4Q6N022 2769 aa12.31□□□□□ -0.44
VAV3-202ENST00000370056 FBN2P35556 2912 aa12.31□□□□□ -0.44
VAV3-202ENST00000370056 R4GN34 69 aa12.29□□□□□ -0.44
VAV3-202ENST00000370056 SPATA8Q6RVD6 105 aa12.25□□□□□ -0.45
VAV3-202ENST00000370056 LUZP6Q538Z0 58 aa12.24□□□□□ -0.45
VAV3-202ENST00000370056 ROMO1P60602 79 aa12.19□□□□□ -0.46
VAV3-202ENST00000370056 CRYBG3Q68DQ2 2970 aa12.19□□□□□ -0.46
VAV3-202ENST00000370056 M0R2T5 61 aa12.19□□□□□ -0.46
VAV3-202ENST00000370056 MYO15AQ9UKN7 3530 aa12.1□□□□□ -0.47
VAV3-202ENST00000370056 M0QZ58 72 aa12.09□□□□□ -0.47
VAV3-202ENST00000370056 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
VAV3-202ENST00000370056 A6NN06 94 aa12.06□□□□□ -0.48
VAV3-202ENST00000370056 ADM2Q7Z4H4 148 aa12.06□□□□□ -0.48
VAV3-202ENST00000370056 KRTAP21-3Q3LHN1 58 aa11.94□□□□□ -0.5
VAV3-202ENST00000370056 A8MU10 97 aa11.92□□□□□ -0.5
VAV3-202ENST00000370056 A8MUU9 505 aa11.9□□□□□ -0.5
VAV3-202ENST00000370056 C20orf166-AS1Q96NR2 134 aa11.86□□□□□ -0.51
VAV3-202ENST00000370056 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
VAV3-202ENST00000370056 RELNP78509 3460 aa11.83□□□□□ -0.52
VAV3-202ENST00000370056 TENM3Q9P273 2699 aa11.83□□□□□ -0.52
VAV3-202ENST00000370056 H3BS24 57 aa11.81□□□□□ -0.52
VAV3-202ENST00000370056 CELSR1Q9NYQ6 3014 aa11.81□□□□□ -0.52
VAV3-202ENST00000370056 KRTAP25-1Q3LHN0 102 aa11.76□□□□□ -0.53
VAV3-202ENST00000370056 WDFY3Q8IZQ1 3526 aa11.69□□□□□ -0.54
VAV3-202ENST00000370056 DCHS1Q96JQ0 3298 aa11.67□□□□□ -0.54
VAV3-202ENST00000370056 TENM1Q9UKZ4 2725 aa11.67□□□□□ -0.54
VAV3-202ENST00000370056 PLAC4Q8WY50 150 aa11.63□□□□□ -0.55
VAV3-202ENST00000370056 A0A0A0MQY5 61 aa11.6□□□□□ -0.55
VAV3-202ENST00000370056 KRTAP16-1A8MUX0 517 aa11.58□□□□□ -0.56
VAV3-202ENST00000370056 PDZD2O15018 2839 aa11.55□□□□□ -0.56
VAV3-202ENST00000370056 LAMA5O15230 3695 aa11.54□□□□□ -0.56
VAV3-202ENST00000370056 ZFHX4Q86UP3 3567 aa11.51□□□□□ -0.57
VAV3-202ENST00000370056 XP32Q5T750 250 aa11.49□□□□□ -0.57
VAV3-202ENST00000370056 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
VAV3-202ENST00000370056 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
VAV3-202ENST00000370056 TGP01266 2768 aa11.41□□□□□ -0.58
VAV3-202ENST00000370056 PKD1L1Q8TDX9 2849 aa11.35□□□□□ -0.59
VAV3-202ENST00000370056 VWFP04275 2813 aa11.34□□□□□ -0.59
VAV3-202ENST00000370056 KRTAP13-3Q3SY46 172 aa11.34□□□□□ -0.59
VAV3-202ENST00000370056 H0YAA0 97 aa11.34□□□□□ -0.59
VAV3-202ENST00000370056 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
VAV3-202ENST00000370056 DMDP11532 3685 aa11.32□□□□□ -0.6
VAV3-202ENST00000370056 FBN1P35555 2871 aaKnown RBP11.27□□□□□ -0.6
VAV3-202ENST00000370056 OTOGQ6ZRI0 2925 aa11.27□□□□□ -0.61
VAV3-202ENST00000370056 TPRXLQ17RH7 258 aa11.25□□□□□ -0.61
VAV3-202ENST00000370056 CSMD1Q96PZ7 3565 aa11.24□□□□□ -0.61
VAV3-202ENST00000370056 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
VAV3-202ENST00000370056 TNP1P09430 55 aa11.19□□□□□ -0.62
VAV3-202ENST00000370056 NDUFAF8A1L188 74 aa11.14□□□□□ -0.63
VAV3-202ENST00000370056 A0A1B0GVY2 172 aa11.1□□□□□ -0.63
VAV3-202ENST00000370056 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
VAV3-202ENST00000370056 KRTAP10-8P60410 259 aa11.07□□□□□ -0.64
VAV3-202ENST00000370056 C10orf95Q9H7T3 257 aa11.06□□□□□ -0.64
VAV3-202ENST00000370056 P0C880 135 aa11.03□□□□□ -0.64
VAV3-202ENST00000370056 PP632Q6XCG6 107 aa11.02□□□□□ -0.64
VAV3-202ENST00000370056 ANK3Q12955 4377 aaKnown RBP10.92□□□□□ -0.66
VAV3-202ENST00000370056 SVEP1Q4LDE5 3571 aa10.92□□□□□ -0.66
VAV3-202ENST00000370056 ZFHX3Q15911 3703 aa10.85□□□□□ -0.67
VAV3-202ENST00000370056 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
VAV3-202ENST00000370056 SPENQ96T58 3664 aaKnown RBP10.77□□□□□ -0.69
VAV3-202ENST00000370056 CSMD2Q7Z408 3487 aa10.73□□□□□ -0.69
VAV3-202ENST00000370056 KRTAP3-1Q9BYR8 98 aa10.72□□□□□ -0.69
VAV3-202ENST00000370056 CUBNO60494 3623 aa10.66□□□□□ -0.7
VAV3-202ENST00000370056 MEGF8Q7Z7M0 2845 aa10.64□□□□□ -0.71
VAV3-202ENST00000370056 TRRAPQ9Y4A5 3859 aa10.64□□□□□ -0.71
VAV3-202ENST00000370056 SRRM2Q9UQ35 2752 aaKnown RBP10.63□□□□□ -0.71
VAV3-202ENST00000370056 KRTAP10-10P60014 251 aa10.63□□□□□ -0.71
VAV3-202ENST00000370056 KRTAP12-2P59991 146 aa10.6□□□□□ -0.71
VAV3-202ENST00000370056 BSNQ9UPA5 3926 aa10.6□□□□□ -0.71
VAV3-202ENST00000370056 KRTAP12-1P59990 96 aa10.49□□□□□ -0.73
VAV3-202ENST00000370056 COL7A1Q02388 2944 aa10.43□□□□□ -0.74
VAV3-202ENST00000370056 PRO2289Q9P1D8 64 aa10.41□□□□□ -0.74
VAV3-202ENST00000370056 KRTAP10-6P60371 365 aaPredicted RBP10.38□□□□□ -0.75
VAV3-202ENST00000370056 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
VAV3-202ENST00000370056 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
VAV3-202ENST00000370056 MT1HL1P0DM35 61 aa10.21□□□□□ -0.77
VAV3-202ENST00000370056 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
VAV3-202ENST00000370056 VPS13CQ709C8 3753 aa10.15□□□□□ -0.79
VAV3-202ENST00000370056 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
VAV3-202ENST00000370056 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
VAV3-202ENST00000370056 ZNF469Q96JG9 3925 aaPredicted RBP9.81□□□□□ -0.84
VAV3-202ENST00000370056 DNAH9Q9NYC9 4486 aa9.79□□□□□ -0.84
VAV3-202ENST00000370056 KRTAP4-5Q9BYR2 181 aa9.73□□□□□ -0.85
VAV3-202ENST00000370056 ALMS1Q8TCU4 4167 aa9.7□□□□□ -0.86
VAV3-202ENST00000370056 AKAP9Q99996 3911 aa9.68□□□□□ -0.86
VAV3-202ENST00000370056 CSMD3Q7Z407 3707 aa9.64□□□□□ -0.87
VAV3-202ENST00000370056 KRTAP15-1Q3LI76 137 aa9.63□□□□□ -0.87
VAV3-202ENST00000370056 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
VAV3-202ENST00000370056 DNAH1Q9P2D7 4330 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms