RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CDH23Q9H251 3354 aa4.64□□□□□ -1.67
SHPRH-203ENST00000367505 A8MU10 97 aa4.63□□□□□ -1.67
SHPRH-203ENST00000367505 ZZEF1O43149 2961 aa4.63□□□□□ -1.67
SHPRH-203ENST00000367505 HIVEP1P15822 2718 aa4.63□□□□□ -1.67
SHPRH-203ENST00000367505 CELSR2Q9HCU4 2923 aa4.63□□□□□ -1.67
SHPRH-203ENST00000367505 BOD1L1Q8NFC6 3051 aa4.62□□□□□ -1.67
SHPRH-203ENST00000367505 VCANP13611 3396 aa4.61□□□□□ -1.67
SHPRH-203ENST00000367505 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
SHPRH-203ENST00000367505 A8MUU9 505 aa4.59□□□□□ -1.67
SHPRH-203ENST00000367505 ZANQ9Y493 2812 aa4.58□□□□□ -1.68
SHPRH-203ENST00000367505 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
SHPRH-203ENST00000367505 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
SHPRH-203ENST00000367505 DCHS2Q6V1P9 2916 aa4.55□□□□□ -1.68
SHPRH-203ENST00000367505 DNAH14Q0VDD8 3507 aa4.55□□□□□ -1.68
SHPRH-203ENST00000367505 SZT2Q5T011 3432 aa4.53□□□□□ -1.68
SHPRH-203ENST00000367505 COL6A3P12111 3177 aa4.52□□□□□ -1.69
SHPRH-203ENST00000367505 TENM4Q6N022 2769 aa4.5□□□□□ -1.69
SHPRH-203ENST00000367505 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
SHPRH-203ENST00000367505 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
SHPRH-203ENST00000367505 CFAP47Q6ZTR5 3102 aa4.5□□□□□ -1.69
SHPRH-203ENST00000367505 TNRC18O15417 2968 aaPredicted RBP4.5□□□□□ -1.69
SHPRH-203ENST00000367505 NF1P21359 2839 aa4.49□□□□□ -1.69
SHPRH-203ENST00000367505 REV3LO60673 3130 aa4.47□□□□□ -1.69
SHPRH-203ENST00000367505 FBN2P35556 2912 aa4.47□□□□□ -1.69
SHPRH-203ENST00000367505 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
SHPRH-203ENST00000367505 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
SHPRH-203ENST00000367505 TNP1P09430 55 aa4.44□□□□□ -1.7
SHPRH-203ENST00000367505 H0YAA0 97 aa4.43□□□□□ -1.7
SHPRH-203ENST00000367505 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
SHPRH-203ENST00000367505 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
SHPRH-203ENST00000367505 CRYBG3Q68DQ2 2970 aa4.41□□□□□ -1.7
SHPRH-203ENST00000367505 DMXL1Q9Y485 3027 aa4.4□□□□□ -1.71
SHPRH-203ENST00000367505 KRTAP21-3Q3LHN1 58 aa4.4□□□□□ -1.71
SHPRH-203ENST00000367505 TENM1Q9UKZ4 2725 aa4.38□□□□□ -1.71
SHPRH-203ENST00000367505 MXRA5Q9NR99 2828 aa4.37□□□□□ -1.71
SHPRH-203ENST00000367505 TGP01266 2768 aa4.36□□□□□ -1.71
SHPRH-203ENST00000367505 USP34Q70CQ2 3546 aa4.36□□□□□ -1.71
SHPRH-203ENST00000367505 XP32Q5T750 250 aa4.36□□□□□ -1.71
SHPRH-203ENST00000367505 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
SHPRH-203ENST00000367505 CELSR1Q9NYQ6 3014 aa4.34□□□□□ -1.71
SHPRH-203ENST00000367505 P0C880 135 aa4.34□□□□□ -1.71
SHPRH-203ENST00000367505 LOC400499M0QZD8 3231 aa4.33□□□□□ -1.72
SHPRH-203ENST00000367505 SPEGQ15772 3267 aa4.32□□□□□ -1.72
SHPRH-203ENST00000367505 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
SHPRH-203ENST00000367505 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
SHPRH-203ENST00000367505 PDZD2O15018 2839 aa4.25□□□□□ -1.73
SHPRH-203ENST00000367505 SPTBN5Q9NRC6 3674 aaKnown RBP4.23□□□□□ -1.73
SHPRH-203ENST00000367505 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
SHPRH-203ENST00000367505 TENM2Q9NT68 2774 aa4.17□□□□□ -1.74
SHPRH-203ENST00000367505 MYO15AQ9UKN7 3530 aa4.17□□□□□ -1.74
SHPRH-203ENST00000367505 PKD1L1Q8TDX9 2849 aa4.16□□□□□ -1.74
SHPRH-203ENST00000367505 KRTAP12-2P59991 146 aa4.1□□□□□ -1.75
SHPRH-203ENST00000367505 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
SHPRH-203ENST00000367505 VWFP04275 2813 aa4.09□□□□□ -1.75
SHPRH-203ENST00000367505 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
SHPRH-203ENST00000367505 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
SHPRH-203ENST00000367505 DCHS1Q96JQ0 3298 aa4.08□□□□□ -1.76
SHPRH-203ENST00000367505 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
SHPRH-203ENST00000367505 WDFY3Q8IZQ1 3526 aa4.06□□□□□ -1.76
SHPRH-203ENST00000367505 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
SHPRH-203ENST00000367505 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
SHPRH-203ENST00000367505 RELNP78509 3460 aa4.05□□□□□ -1.76
SHPRH-203ENST00000367505 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
SHPRH-203ENST00000367505 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
SHPRH-203ENST00000367505 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-203ENST00000367505 MEGF8Q7Z7M0 2845 aa3.98□□□□□ -1.77
SHPRH-203ENST00000367505 OTOGQ6ZRI0 2925 aa3.94□□□□□ -1.78
SHPRH-203ENST00000367505 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
SHPRH-203ENST00000367505 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
SHPRH-203ENST00000367505 CSMD1Q96PZ7 3565 aa3.91□□□□□ -1.78
SHPRH-203ENST00000367505 ZFHX4Q86UP3 3567 aa3.9□□□□□ -1.79
SHPRH-203ENST00000367505 LAMA5O15230 3695 aa3.88□□□□□ -1.79
SHPRH-203ENST00000367505 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
SHPRH-203ENST00000367505 NBPF19A0A087WUL8 3843 aa3.85□□□□□ -1.79
SHPRH-203ENST00000367505 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
SHPRH-203ENST00000367505 KRTAP3-2Q9BYR7 98 aa3.84□□□□□ -1.79
SHPRH-203ENST00000367505 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
SHPRH-203ENST00000367505 KRTAP3-3Q9BYR6 98 aa3.82□□□□□ -1.8
SHPRH-203ENST00000367505 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
SHPRH-203ENST00000367505 INE1O15225 51 aa3.78□□□□□ -1.8
SHPRH-203ENST00000367505 ANK3Q12955 4377 aaKnown RBP3.77□□□□□ -1.81
SHPRH-203ENST00000367505 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
SHPRH-203ENST00000367505 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
SHPRH-203ENST00000367505 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
SHPRH-203ENST00000367505 SVEP1Q4LDE5 3571 aa3.73□□□□□ -1.81
SHPRH-203ENST00000367505 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
SHPRH-203ENST00000367505 DMDP11532 3685 aa3.71□□□□□ -1.82
SHPRH-203ENST00000367505 MUC3AQ02505 3323 aa3.7□□□□□ -1.82
SHPRH-203ENST00000367505 CUBNO60494 3623 aa3.69□□□□□ -1.82
SHPRH-203ENST00000367505 SPENQ96T58 3664 aaKnown RBP3.66□□□□□ -1.82
SHPRH-203ENST00000367505 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
SHPRH-203ENST00000367505 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
SHPRH-203ENST00000367505 HUWE1Q7Z6Z7 4374 aaKnown RBP3.58□□□□□ -1.84
SHPRH-203ENST00000367505 BSNQ9UPA5 3926 aa3.58□□□□□ -1.84
SHPRH-203ENST00000367505 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
SHPRH-203ENST00000367505 VPS13CQ709C8 3753 aa3.51□□□□□ -1.85
SHPRH-203ENST00000367505 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
SHPRH-203ENST00000367505 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
SHPRH-203ENST00000367505 ALMS1Q8TCU4 4167 aa3.45□□□□□ -1.86
SHPRH-203ENST00000367505 KRTAP4-5Q9BYR2 181 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms