RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 CFAP47Q6ZTR5 3102 aa9.61□□□□□ -0.87
SCAF8-201ENST00000367178 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
SCAF8-201ENST00000367178 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
SCAF8-201ENST00000367178 R4GN34 69 aa9.58□□□□□ -0.88
SCAF8-201ENST00000367178 NOTCH2NLQ7Z3S9 236 aa9.54□□□□□ -0.88
SCAF8-201ENST00000367178 LUZP6Q538Z0 58 aa9.53□□□□□ -0.88
SCAF8-201ENST00000367178 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
SCAF8-201ENST00000367178 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
SCAF8-201ENST00000367178 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
SCAF8-201ENST00000367178 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
SCAF8-201ENST00000367178 NF1P21359 2839 aa9.43□□□□□ -0.9
SCAF8-201ENST00000367178 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
SCAF8-201ENST00000367178 SPEGQ15772 3267 aa9.41□□□□□ -0.9
SCAF8-201ENST00000367178 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
SCAF8-201ENST00000367178 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
SCAF8-201ENST00000367178 SPTBN5Q9NRC6 3674 aaKnown RBP9.4□□□□□ -0.91
SCAF8-201ENST00000367178 M0QZ58 72 aa9.39□□□□□ -0.91
SCAF8-201ENST00000367178 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
SCAF8-201ENST00000367178 FBN2P35556 2912 aa9.38□□□□□ -0.91
SCAF8-201ENST00000367178 LOC400499M0QZD8 3231 aa9.35□□□□□ -0.91
SCAF8-201ENST00000367178 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
SCAF8-201ENST00000367178 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
SCAF8-201ENST00000367178 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.92
SCAF8-201ENST00000367178 A6NN06 94 aa9.25□□□□□ -0.93
SCAF8-201ENST00000367178 ROMO1P60602 79 aa9.24□□□□□ -0.93
SCAF8-201ENST00000367178 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.93
SCAF8-201ENST00000367178 A0A0A0MQY5 61 aa9.21□□□□□ -0.94
SCAF8-201ENST00000367178 A8MU10 97 aa9.21□□□□□ -0.94
SCAF8-201ENST00000367178 MXRA5Q9NR99 2828 aa9.16□□□□□ -0.94
SCAF8-201ENST00000367178 PLAC4Q8WY50 150 aa9.15□□□□□ -0.95
SCAF8-201ENST00000367178 MYO15AQ9UKN7 3530 aa9.15□□□□□ -0.95
SCAF8-201ENST00000367178 A8MUU9 505 aa9.08□□□□□ -0.96
SCAF8-201ENST00000367178 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
SCAF8-201ENST00000367178 CELSR1Q9NYQ6 3014 aa9.06□□□□□ -0.96
SCAF8-201ENST00000367178 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
SCAF8-201ENST00000367178 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
SCAF8-201ENST00000367178 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
SCAF8-201ENST00000367178 PKD1L1Q8TDX9 2849 aa9.02□□□□□ -0.97
SCAF8-201ENST00000367178 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
SCAF8-201ENST00000367178 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
SCAF8-201ENST00000367178 RELNP78509 3460 aa8.93□□□□□ -0.98
SCAF8-201ENST00000367178 XP32Q5T750 250 aa8.88□□□□□ -0.99
SCAF8-201ENST00000367178 NDUFAF8A1L188 74 aa8.85□□□□□ -0.99
SCAF8-201ENST00000367178 VWFP04275 2813 aa8.81□□□□□ -1
SCAF8-201ENST00000367178 TGP01266 2768 aa8.81□□□□□ -1
SCAF8-201ENST00000367178 PDZD2O15018 2839 aa8.78□□□□□ -1
SCAF8-201ENST00000367178 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
SCAF8-201ENST00000367178 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
SCAF8-201ENST00000367178 FBN1P35555 2871 aaKnown RBP8.73□□□□□ -1.01
SCAF8-201ENST00000367178 TNP1P09430 55 aa8.66□□□□□ -1.02
SCAF8-201ENST00000367178 LAMA5O15230 3695 aa8.65□□□□□ -1.02
SCAF8-201ENST00000367178 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.03
SCAF8-201ENST00000367178 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
SCAF8-201ENST00000367178 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
SCAF8-201ENST00000367178 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
SCAF8-201ENST00000367178 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
SCAF8-201ENST00000367178 ASPMQ8IZT6 3477 aa8.53□□□□□ -1.04
SCAF8-201ENST00000367178 ZFHX4Q86UP3 3567 aa8.5□□□□□ -1.05
SCAF8-201ENST00000367178 MUC3AQ02505 3323 aa8.5□□□□□ -1.05
SCAF8-201ENST00000367178 NBPF19A0A087WUL8 3843 aa8.48□□□□□ -1.05
SCAF8-201ENST00000367178 H0YAA0 97 aa8.48□□□□□ -1.05
SCAF8-201ENST00000367178 ZFHX3Q15911 3703 aa8.47□□□□□ -1.05
SCAF8-201ENST00000367178 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.06
SCAF8-201ENST00000367178 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
SCAF8-201ENST00000367178 P0C880 135 aa8.4□□□□□ -1.06
SCAF8-201ENST00000367178 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
SCAF8-201ENST00000367178 DMDP11532 3685 aa8.35□□□□□ -1.07
SCAF8-201ENST00000367178 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
SCAF8-201ENST00000367178 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
SCAF8-201ENST00000367178 SMG1Q96Q15 3661 aaKnown RBP8.21□□□□□ -1.1
SCAF8-201ENST00000367178 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
SCAF8-201ENST00000367178 CSMD2Q7Z408 3487 aa8.17□□□□□ -1.1
SCAF8-201ENST00000367178 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
SCAF8-201ENST00000367178 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
SCAF8-201ENST00000367178 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
SCAF8-201ENST00000367178 SVEP1Q4LDE5 3571 aa8.07□□□□□ -1.12
SCAF8-201ENST00000367178 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
SCAF8-201ENST00000367178 KRTAP3-1Q9BYR8 98 aa8.03□□□□□ -1.12
SCAF8-201ENST00000367178 CUBNO60494 3623 aa8.03□□□□□ -1.12
SCAF8-201ENST00000367178 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
SCAF8-201ENST00000367178 SPENQ96T58 3664 aaKnown RBP7.94□□□□□ -1.14
SCAF8-201ENST00000367178 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
SCAF8-201ENST00000367178 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
SCAF8-201ENST00000367178 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
SCAF8-201ENST00000367178 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
SCAF8-201ENST00000367178 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
SCAF8-201ENST00000367178 BSNQ9UPA5 3926 aa7.7□□□□□ -1.18
SCAF8-201ENST00000367178 KRTAP4-5Q9BYR2 181 aa7.67□□□□□ -1.18
SCAF8-201ENST00000367178 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
SCAF8-201ENST00000367178 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
SCAF8-201ENST00000367178 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
SCAF8-201ENST00000367178 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
SCAF8-201ENST00000367178 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
SCAF8-201ENST00000367178 DNAH9Q9NYC9 4486 aa7.32□□□□□ -1.24
SCAF8-201ENST00000367178 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
SCAF8-201ENST00000367178 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
SCAF8-201ENST00000367178 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
SCAF8-201ENST00000367178 DNHD1Q96M86 4753 aa7.24□□□□□ -1.25
SCAF8-201ENST00000367178 ZNF469Q96JG9 3925 aaPredicted RBP7.24□□□□□ -1.25
SCAF8-201ENST00000367178 CSMD3Q7Z407 3707 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms