RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
PCGF3-201ENST00000362003 ATMQ13315 3056 aa9.07□□□□□ -0.96
PCGF3-201ENST00000362003 HIVEP1P15822 2718 aa9.07□□□□□ -0.96
PCGF3-201ENST00000362003 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
PCGF3-201ENST00000362003 FLNCQ14315 2725 aa9.02□□□□□ -0.96
PCGF3-201ENST00000362003 VCANP13611 3396 aa9.02□□□□□ -0.97
PCGF3-201ENST00000362003 EYSQ5T1H1 3165 aa9.01□□□□□ -0.97
PCGF3-201ENST00000362003 APCP25054 2843 aa9□□□□□ -0.97
PCGF3-201ENST00000362003 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
PCGF3-201ENST00000362003 A0A1B0GVY2 172 aa9□□□□□ -0.97
PCGF3-201ENST00000362003 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
PCGF3-201ENST00000362003 COL12A1Q99715 3063 aa8.96□□□□□ -0.97
PCGF3-201ENST00000362003 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
PCGF3-201ENST00000362003 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
PCGF3-201ENST00000362003 DMXL2Q8TDJ6 3036 aa8.92□□□□□ -0.98
PCGF3-201ENST00000362003 FRYLO94915 3013 aa8.92□□□□□ -0.98
PCGF3-201ENST00000362003 KRTAP10-8P60410 259 aa8.92□□□□□ -0.98
PCGF3-201ENST00000362003 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
PCGF3-201ENST00000362003 ADGRG4Q8IZF6 3080 aa8.9□□□□□ -0.98
PCGF3-201ENST00000362003 BOD1L1Q8NFC6 3051 aa8.9□□□□□ -0.98
PCGF3-201ENST00000362003 H0YAA0 97 aa8.89□□□□□ -0.99
PCGF3-201ENST00000362003 USP34Q70CQ2 3546 aa8.87□□□□□ -0.99
PCGF3-201ENST00000362003 TACC2O95359 2948 aa8.86□□□□□ -0.99
PCGF3-201ENST00000362003 NDUFAF8A1L188 74 aa8.86□□□□□ -0.99
PCGF3-201ENST00000362003 HRNRQ86YZ3 2850 aaPredicted RBP8.85□□□□□ -0.99
PCGF3-201ENST00000362003 KRTAP10-10P60014 251 aa8.81□□□□□ -1
PCGF3-201ENST00000362003 NIPBLQ6KC79 2804 aaeCLIP8.76□□□□□ -1.01
PCGF3-201ENST00000362003 ZZEF1O43149 2961 aa8.76□□□□□ -1.01
PCGF3-201ENST00000362003 TENM4Q6N022 2769 aa8.75□□□□□ -1.01
PCGF3-201ENST00000362003 NBEAQ8NFP9 2946 aa8.74□□□□□ -1.01
PCGF3-201ENST00000362003 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
PCGF3-201ENST00000362003 PRO2289Q9P1D8 64 aa8.73□□□□□ -1.01
PCGF3-201ENST00000362003 P0C880 135 aa8.7□□□□□ -1.02
PCGF3-201ENST00000362003 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
PCGF3-201ENST00000362003 DMXL1Q9Y485 3027 aa8.67□□□□□ -1.02
PCGF3-201ENST00000362003 CFAP47Q6ZTR5 3102 aa8.63□□□□□ -1.03
PCGF3-201ENST00000362003 REV3LO60673 3130 aa8.61□□□□□ -1.03
PCGF3-201ENST00000362003 ASH1LQ9NR48 2969 aaKnown RBP8.6□□□□□ -1.03
PCGF3-201ENST00000362003 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
PCGF3-201ENST00000362003 ZANQ9Y493 2812 aa8.55□□□□□ -1.04
PCGF3-201ENST00000362003 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
PCGF3-201ENST00000362003 SPEGQ15772 3267 aa8.48□□□□□ -1.05
PCGF3-201ENST00000362003 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
PCGF3-201ENST00000362003 FBN2P35556 2912 aa8.39□□□□□ -1.07
PCGF3-201ENST00000362003 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
PCGF3-201ENST00000362003 NF1P21359 2839 aa8.38□□□□□ -1.07
PCGF3-201ENST00000362003 LOC400499M0QZD8 3231 aa8.37□□□□□ -1.07
PCGF3-201ENST00000362003 ANK3Q12955 4377 aaKnown RBP8.36□□□□□ -1.07
PCGF3-201ENST00000362003 PDZD2O15018 2839 aa8.34□□□□□ -1.07
PCGF3-201ENST00000362003 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
PCGF3-201ENST00000362003 CELSR1Q9NYQ6 3014 aa8.3□□□□□ -1.08
PCGF3-201ENST00000362003 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
PCGF3-201ENST00000362003 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
PCGF3-201ENST00000362003 MYO15AQ9UKN7 3530 aa8.25□□□□□ -1.09
PCGF3-201ENST00000362003 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
PCGF3-201ENST00000362003 MXRA5Q9NR99 2828 aa8.23□□□□□ -1.09
PCGF3-201ENST00000362003 TENM3Q9P273 2699 aa8.19□□□□□ -1.1
PCGF3-201ENST00000362003 ASPMQ8IZT6 3477 aa8.19□□□□□ -1.1
PCGF3-201ENST00000362003 TGP01266 2768 aa8.18□□□□□ -1.1
PCGF3-201ENST00000362003 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
PCGF3-201ENST00000362003 WDFY3Q8IZQ1 3526 aa8.15□□□□□ -1.1
PCGF3-201ENST00000362003 RELNP78509 3460 aa8.13□□□□□ -1.11
PCGF3-201ENST00000362003 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
PCGF3-201ENST00000362003 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
PCGF3-201ENST00000362003 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
PCGF3-201ENST00000362003 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
PCGF3-201ENST00000362003 ZFHX4Q86UP3 3567 aa7.95□□□□□ -1.14
PCGF3-201ENST00000362003 HUWE1Q7Z6Z7 4374 aaKnown RBP7.95□□□□□ -1.14
PCGF3-201ENST00000362003 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
PCGF3-201ENST00000362003 LAMA5O15230 3695 aa7.88□□□□□ -1.15
PCGF3-201ENST00000362003 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
PCGF3-201ENST00000362003 DCHS1Q96JQ0 3298 aa7.86□□□□□ -1.15
PCGF3-201ENST00000362003 CSMD1Q96PZ7 3565 aa7.82□□□□□ -1.16
PCGF3-201ENST00000362003 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
PCGF3-201ENST00000362003 DMDP11532 3685 aa7.81□□□□□ -1.16
PCGF3-201ENST00000362003 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
PCGF3-201ENST00000362003 VWFP04275 2813 aa7.79□□□□□ -1.16
PCGF3-201ENST00000362003 SMG1Q96Q15 3661 aaKnown RBP7.76□□□□□ -1.17
PCGF3-201ENST00000362003 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
PCGF3-201ENST00000362003 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
PCGF3-201ENST00000362003 PKD1L1Q8TDX9 2849 aa7.75□□□□□ -1.17
PCGF3-201ENST00000362003 BSNQ9UPA5 3926 aa7.67□□□□□ -1.18
PCGF3-201ENST00000362003 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
PCGF3-201ENST00000362003 SPENQ96T58 3664 aaKnown RBP7.59□□□□□ -1.19
PCGF3-201ENST00000362003 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
PCGF3-201ENST00000362003 ZFHX3Q15911 3703 aa7.57□□□□□ -1.2
PCGF3-201ENST00000362003 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
PCGF3-201ENST00000362003 FBN3Q75N90 2809 aa7.5□□□□□ -1.21
PCGF3-201ENST00000362003 DNAH9Q9NYC9 4486 aa7.48□□□□□ -1.21
PCGF3-201ENST00000362003 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
PCGF3-201ENST00000362003 SVEP1Q4LDE5 3571 aa7.46□□□□□ -1.21
PCGF3-201ENST00000362003 CSMD2Q7Z408 3487 aa7.45□□□□□ -1.22
PCGF3-201ENST00000362003 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
PCGF3-201ENST00000362003 AKAP9Q99996 3911 aa7.42□□□□□ -1.22
PCGF3-201ENST00000362003 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
PCGF3-201ENST00000362003 CUBNO60494 3623 aa7.37□□□□□ -1.23
PCGF3-201ENST00000362003 INE1O15225 51 aa7.37□□□□□ -1.23
PCGF3-201ENST00000362003 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
PCGF3-201ENST00000362003 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
PCGF3-201ENST00000362003 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms