RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
CDC42BPB-201ENST00000361246 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
CDC42BPB-201ENST00000361246 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPB-201ENST00000361246 A0A0A0MQY5 61 aa11.32□□□□□ -0.6
CDC42BPB-201ENST00000361246 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-201ENST00000361246 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPB-201ENST00000361246 UTP20O75691 2785 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-201ENST00000361246 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-201ENST00000361246 APCP25054 2843 aa11.25□□□□□ -0.61
CDC42BPB-201ENST00000361246 STAB2Q8WWQ8 2551 aa11.25□□□□□ -0.61
CDC42BPB-201ENST00000361246 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-201ENST00000361246 KMT2BQ9UMN6 2715 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPB-201ENST00000361246 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
CDC42BPB-201ENST00000361246 ITPR1Q14643 2758 aa11.2□□□□□ -0.62
CDC42BPB-201ENST00000361246 DMXL1Q9Y485 3027 aa11.2□□□□□ -0.62
CDC42BPB-201ENST00000361246 RPS29P62273 56 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-201ENST00000361246 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.62
CDC42BPB-201ENST00000361246 H3BS24 57 aa11.15□□□□□ -0.62
CDC42BPB-201ENST00000361246 KRTAP21-3Q3LHN1 58 aa11.14□□□□□ -0.63
CDC42BPB-201ENST00000361246 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
CDC42BPB-201ENST00000361246 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
CDC42BPB-201ENST00000361246 LOC400499M0QZD8 3231 aa11.11□□□□□ -0.63
CDC42BPB-201ENST00000361246 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
CDC42BPB-201ENST00000361246 KRTAP13-1Q8IUC0 172 aa11.09□□□□□ -0.63
CDC42BPB-201ENST00000361246 NBEAQ8NFP9 2946 aa11.09□□□□□ -0.63
CDC42BPB-201ENST00000361246 DCHS1Q96JQ0 3298 aa11.05□□□□□ -0.64
CDC42BPB-201ENST00000361246 TNP1P09430 55 aa10.98□□□□□ -0.65
CDC42BPB-201ENST00000361246 C10orf95Q9H7T3 257 aa10.98□□□□□ -0.65
CDC42BPB-201ENST00000361246 XP32Q5T750 250 aa10.95□□□□□ -0.66
CDC42BPB-201ENST00000361246 KRTAP10-10P60014 251 aa10.95□□□□□ -0.66
CDC42BPB-201ENST00000361246 RELNP78509 3460 aa10.94□□□□□ -0.66
CDC42BPB-201ENST00000361246 CELSR2Q9HCU4 2923 aa10.93□□□□□ -0.66
CDC42BPB-201ENST00000361246 ZFHX4Q86UP3 3567 aa10.89□□□□□ -0.67
CDC42BPB-201ENST00000361246 LAMA5O15230 3695 aa10.89□□□□□ -0.67
CDC42BPB-201ENST00000361246 KRTAP25-1Q3LHN0 102 aa10.83□□□□□ -0.68
CDC42BPB-201ENST00000361246 FLNCQ14315 2725 aa10.83□□□□□ -0.68
CDC42BPB-201ENST00000361246 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
CDC42BPB-201ENST00000361246 KRTAP1-4P0C5Y4 121 aa10.79□□□□□ -0.68
CDC42BPB-201ENST00000361246 CSMD1Q96PZ7 3565 aa10.78□□□□□ -0.68
CDC42BPB-201ENST00000361246 DCHS2Q6V1P9 2916 aa10.76□□□□□ -0.69
CDC42BPB-201ENST00000361246 DMDP11532 3685 aa10.65□□□□□ -0.7
CDC42BPB-201ENST00000361246 CELSR1Q9NYQ6 3014 aa10.65□□□□□ -0.7
CDC42BPB-201ENST00000361246 NDUFAF8A1L188 74 aa10.65□□□□□ -0.7
CDC42BPB-201ENST00000361246 TPRXLQ17RH7 258 aa10.6□□□□□ -0.71
CDC42BPB-201ENST00000361246 A6NN06 94 aa10.57□□□□□ -0.72
CDC42BPB-201ENST00000361246 TENM1Q9UKZ4 2725 aa10.55□□□□□ -0.72
CDC42BPB-201ENST00000361246 FBN2P35556 2912 aa10.55□□□□□ -0.72
CDC42BPB-201ENST00000361246 TENM2Q9NT68 2774 aa10.55□□□□□ -0.72
CDC42BPB-201ENST00000361246 KRTAP16-1A8MUX0 517 aa10.53□□□□□ -0.72
CDC42BPB-201ENST00000361246 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-201ENST00000361246 ZANQ9Y493 2812 aa10.51□□□□□ -0.73
CDC42BPB-201ENST00000361246 NF1P21359 2839 aa10.48□□□□□ -0.73
CDC42BPB-201ENST00000361246 KRTAP13-3Q3SY46 172 aa10.47□□□□□ -0.73
CDC42BPB-201ENST00000361246 PRO2289Q9P1D8 64 aa10.46□□□□□ -0.74
CDC42BPB-201ENST00000361246 ZFHX3Q15911 3703 aa10.42□□□□□ -0.74
CDC42BPB-201ENST00000361246 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
CDC42BPB-201ENST00000361246 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
CDC42BPB-201ENST00000361246 SPENQ96T58 3664 aaKnown RBP10.38□□□□□ -0.75
CDC42BPB-201ENST00000361246 P0C880 135 aa10.38□□□□□ -0.75
CDC42BPB-201ENST00000361246 H0YAA0 97 aa10.34□□□□□ -0.75
CDC42BPB-201ENST00000361246 SVEP1Q4LDE5 3571 aa10.29□□□□□ -0.76
CDC42BPB-201ENST00000361246 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
CDC42BPB-201ENST00000361246 VWFP04275 2813 aa10.19□□□□□ -0.78
CDC42BPB-201ENST00000361246 CSMD2Q7Z408 3487 aa10.18□□□□□ -0.78
CDC42BPB-201ENST00000361246 CUBNO60494 3623 aa10.17□□□□□ -0.78
CDC42BPB-201ENST00000361246 PP632Q6XCG6 107 aa10.17□□□□□ -0.78
CDC42BPB-201ENST00000361246 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
CDC42BPB-201ENST00000361246 MUC3AQ02505 3323 aa10.06□□□□□ -0.8
CDC42BPB-201ENST00000361246 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
CDC42BPB-201ENST00000361246 TGP01266 2768 aa10□□□□□ -0.81
CDC42BPB-201ENST00000361246 KRTAP12-2P59991 146 aa9.96□□□□□ -0.81
CDC42BPB-201ENST00000361246 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
CDC42BPB-201ENST00000361246 BSNQ9UPA5 3926 aa9.82□□□□□ -0.84
CDC42BPB-201ENST00000361246 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
CDC42BPB-201ENST00000361246 PDZD2O15018 2839 aa9.78□□□□□ -0.84
CDC42BPB-201ENST00000361246 CRCT1Q9UGL9 99 aa9.75□□□□□ -0.85
CDC42BPB-201ENST00000361246 VPS13CQ709C8 3753 aa9.7□□□□□ -0.86
CDC42BPB-201ENST00000361246 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.87
CDC42BPB-201ENST00000361246 FBN1P35555 2871 aaKnown RBP9.64□□□□□ -0.87
CDC42BPB-201ENST00000361246 KRTAP15-1Q3LI76 137 aa9.62□□□□□ -0.87
CDC42BPB-201ENST00000361246 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
CDC42BPB-201ENST00000361246 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
CDC42BPB-201ENST00000361246 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
CDC42BPB-201ENST00000361246 KRTAP3-1Q9BYR8 98 aa9.52□□□□□ -0.88
CDC42BPB-201ENST00000361246 CSMD3Q7Z407 3707 aa9.48□□□□□ -0.89
CDC42BPB-201ENST00000361246 OTOGQ6ZRI0 2925 aa9.47□□□□□ -0.89
CDC42BPB-201ENST00000361246 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
CDC42BPB-201ENST00000361246 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
CDC42BPB-201ENST00000361246 FBN3Q75N90 2809 aa9.35□□□□□ -0.91
CDC42BPB-201ENST00000361246 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
CDC42BPB-201ENST00000361246 MEGF8Q7Z7M0 2845 aa9.31□□□□□ -0.92
CDC42BPB-201ENST00000361246 AKAP9Q99996 3911 aa9.26□□□□□ -0.93
CDC42BPB-201ENST00000361246 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
CDC42BPB-201ENST00000361246 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
CDC42BPB-201ENST00000361246 ZNF469Q96JG9 3925 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-201ENST00000361246 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-201ENST00000361246 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPB-201ENST00000361246 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
CDC42BPB-201ENST00000361246 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPB-201ENST00000361246 LCE3AQ5TA76 89 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms