RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
SMURF1-201ENST00000361125 RPS29P62273 56 aaKnown RBP11.91□□□□□ -0.5
SMURF1-201ENST00000361125 H3BS24 57 aa11.9□□□□□ -0.5
SMURF1-201ENST00000361125 UTP20O75691 2785 aaKnown RBP11.89□□□□□ -0.51
SMURF1-201ENST00000361125 A8MU10 97 aa11.85□□□□□ -0.51
SMURF1-201ENST00000361125 PLAC4Q8WY50 150 aa11.83□□□□□ -0.51
SMURF1-201ENST00000361125 TNRC18O15417 2968 aaPredicted RBP11.83□□□□□ -0.52
SMURF1-201ENST00000361125 LOC400499M0QZD8 3231 aa11.8□□□□□ -0.52
SMURF1-201ENST00000361125 ASH1LQ9NR48 2969 aaKnown RBP11.8□□□□□ -0.52
SMURF1-201ENST00000361125 HRNRQ86YZ3 2850 aaPredicted RBP11.8□□□□□ -0.52
SMURF1-201ENST00000361125 DMXL1Q9Y485 3027 aa11.75□□□□□ -0.53
SMURF1-201ENST00000361125 NSD1Q96L73 2696 aaPredicted RBP11.73□□□□□ -0.53
SMURF1-201ENST00000361125 APCP25054 2843 aa11.7□□□□□ -0.54
SMURF1-201ENST00000361125 A8MUU9 505 aa11.67□□□□□ -0.54
SMURF1-201ENST00000361125 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.55
SMURF1-201ENST00000361125 KRTAP21-3Q3LHN1 58 aa11.64□□□□□ -0.55
SMURF1-201ENST00000361125 STAB2Q8WWQ8 2551 aa11.63□□□□□ -0.55
SMURF1-201ENST00000361125 KMT2BQ9UMN6 2715 aaPredicted RBP11.63□□□□□ -0.55
SMURF1-201ENST00000361125 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
SMURF1-201ENST00000361125 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
SMURF1-201ENST00000361125 CRYBG3Q68DQ2 2970 aa11.6□□□□□ -0.55
SMURF1-201ENST00000361125 KRTAP25-1Q3LHN0 102 aa11.56□□□□□ -0.56
SMURF1-201ENST00000361125 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
SMURF1-201ENST00000361125 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
SMURF1-201ENST00000361125 FLG2Q5D862 2391 aaPredicted RBP11.53□□□□□ -0.56
SMURF1-201ENST00000361125 A0A0A0MQY5 61 aa11.51□□□□□ -0.57
SMURF1-201ENST00000361125 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
SMURF1-201ENST00000361125 NIPBLQ6KC79 2804 aaeCLIP11.45□□□□□ -0.58
SMURF1-201ENST00000361125 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
SMURF1-201ENST00000361125 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
SMURF1-201ENST00000361125 FBN2P35556 2912 aa11.39□□□□□ -0.59
SMURF1-201ENST00000361125 DCHS2Q6V1P9 2916 aa11.36□□□□□ -0.59
SMURF1-201ENST00000361125 RELNP78509 3460 aa11.32□□□□□ -0.6
SMURF1-201ENST00000361125 XP32Q5T750 250 aa11.3□□□□□ -0.6
SMURF1-201ENST00000361125 ASPMQ8IZT6 3477 aa11.29□□□□□ -0.6
SMURF1-201ENST00000361125 TENM4Q6N022 2769 aa11.27□□□□□ -0.61
SMURF1-201ENST00000361125 DCHS1Q96JQ0 3298 aa11.24□□□□□ -0.61
SMURF1-201ENST00000361125 NF1P21359 2839 aa11.22□□□□□ -0.61
SMURF1-201ENST00000361125 A0A1B0GVY2 172 aa11.18□□□□□ -0.62
SMURF1-201ENST00000361125 LAMA5O15230 3695 aa11.16□□□□□ -0.62
SMURF1-201ENST00000361125 CSMD1Q96PZ7 3565 aa11.16□□□□□ -0.62
SMURF1-201ENST00000361125 DMDP11532 3685 aa11.14□□□□□ -0.63
SMURF1-201ENST00000361125 KRTAP16-1A8MUX0 517 aa11.14□□□□□ -0.63
SMURF1-201ENST00000361125 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
SMURF1-201ENST00000361125 TNP1P09430 55 aa11.12□□□□□ -0.63
SMURF1-201ENST00000361125 SMG1Q96Q15 3661 aaKnown RBP11.11□□□□□ -0.63
SMURF1-201ENST00000361125 H0YAA0 97 aa11.08□□□□□ -0.64
SMURF1-201ENST00000361125 NDUFAF8A1L188 74 aa11.04□□□□□ -0.64
SMURF1-201ENST00000361125 TPRXLQ17RH7 258 aa11□□□□□ -0.65
SMURF1-201ENST00000361125 CELSR1Q9NYQ6 3014 aa10.97□□□□□ -0.65
SMURF1-201ENST00000361125 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
SMURF1-201ENST00000361125 KRTAP13-3Q3SY46 172 aa10.94□□□□□ -0.66
SMURF1-201ENST00000361125 C10orf95Q9H7T3 257 aa10.93□□□□□ -0.66
SMURF1-201ENST00000361125 TENM3Q9P273 2699 aa10.85□□□□□ -0.67
SMURF1-201ENST00000361125 KRTAP10-10P60014 251 aa10.79□□□□□ -0.68
SMURF1-201ENST00000361125 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
SMURF1-201ENST00000361125 SVEP1Q4LDE5 3571 aa10.78□□□□□ -0.68
SMURF1-201ENST00000361125 NBPF19A0A087WUL8 3843 aa10.76□□□□□ -0.69
SMURF1-201ENST00000361125 P0C880 135 aa10.74□□□□□ -0.69
SMURF1-201ENST00000361125 MUC3AQ02505 3323 aa10.72□□□□□ -0.69
SMURF1-201ENST00000361125 PDZD2O15018 2839 aa10.69□□□□□ -0.7
SMURF1-201ENST00000361125 TENM1Q9UKZ4 2725 aa10.69□□□□□ -0.7
SMURF1-201ENST00000361125 PP632Q6XCG6 107 aa10.68□□□□□ -0.7
SMURF1-201ENST00000361125 TGP01266 2768 aa10.65□□□□□ -0.7
SMURF1-201ENST00000361125 ANK3Q12955 4377 aaKnown RBP10.61□□□□□ -0.71
SMURF1-201ENST00000361125 SPENQ96T58 3664 aaKnown RBP10.57□□□□□ -0.72
SMURF1-201ENST00000361125 BSNQ9UPA5 3926 aa10.5□□□□□ -0.73
SMURF1-201ENST00000361125 PRO2289Q9P1D8 64 aa10.46□□□□□ -0.73
SMURF1-201ENST00000361125 VWFP04275 2813 aa10.42□□□□□ -0.74
SMURF1-201ENST00000361125 KRTAP12-2P59991 146 aa10.36□□□□□ -0.75
SMURF1-201ENST00000361125 KRTAP3-1Q9BYR8 98 aa10.36□□□□□ -0.75
SMURF1-201ENST00000361125 PKD1L1Q8TDX9 2849 aa10.36□□□□□ -0.75
SMURF1-201ENST00000361125 OTOGQ6ZRI0 2925 aa10.34□□□□□ -0.75
SMURF1-201ENST00000361125 CUBNO60494 3623 aa10.33□□□□□ -0.76
SMURF1-201ENST00000361125 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
SMURF1-201ENST00000361125 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
SMURF1-201ENST00000361125 ZFHX3Q15911 3703 aa10.23□□□□□ -0.77
SMURF1-201ENST00000361125 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
SMURF1-201ENST00000361125 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
SMURF1-201ENST00000361125 VPS13CQ709C8 3753 aa10.07□□□□□ -0.8
SMURF1-201ENST00000361125 KRTAP13-4Q3LI77 160 aa10.06□□□□□ -0.8
SMURF1-201ENST00000361125 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
SMURF1-201ENST00000361125 HUWE1Q7Z6Z7 4374 aaKnown RBP10□□□□□ -0.81
SMURF1-201ENST00000361125 FBN3Q75N90 2809 aa9.95□□□□□ -0.82
SMURF1-201ENST00000361125 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
SMURF1-201ENST00000361125 MT1HL1P0DM35 61 aa9.85□□□□□ -0.83
SMURF1-201ENST00000361125 MEGF8Q7Z7M0 2845 aa9.8□□□□□ -0.84
SMURF1-201ENST00000361125 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
SMURF1-201ENST00000361125 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
SMURF1-201ENST00000361125 AKAP9Q99996 3911 aa9.72□□□□□ -0.85
SMURF1-201ENST00000361125 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.85
SMURF1-201ENST00000361125 KRTAP15-1Q3LI76 137 aa9.66□□□□□ -0.86
SMURF1-201ENST00000361125 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
SMURF1-201ENST00000361125 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
SMURF1-201ENST00000361125 ZNF469Q96JG9 3925 aaPredicted RBP9.57□□□□□ -0.88
SMURF1-201ENST00000361125 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
SMURF1-201ENST00000361125 COL7A1Q02388 2944 aa9.46□□□□□ -0.89
SMURF1-201ENST00000361125 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.9
SMURF1-201ENST00000361125 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
SMURF1-201ENST00000361125 KRTAP10-12P60413 245 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms