RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RPL37P61927 97 aaKnown RBP2.79□□□□□ -1.96
SCN3A-202ENST00000360093 KRTAP11-1Q8IUC1 163 aa2.78□□□□□ -1.96
SCN3A-202ENST00000360093 CYSTM1Q9H1C7 97 aa2.78□□□□□ -1.96
SCN3A-202ENST00000360093 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
SCN3A-202ENST00000360093 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
SCN3A-202ENST00000360093 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
SCN3A-202ENST00000360093 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
SCN3A-202ENST00000360093 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
SCN3A-202ENST00000360093 SPEGQ15772 3267 aa2.75□□□□□ -1.97
SCN3A-202ENST00000360093 M0QZ58 72 aa2.75□□□□□ -1.97
SCN3A-202ENST00000360093 ROMO1P60602 79 aa2.75□□□□□ -1.97
SCN3A-202ENST00000360093 CELSR2Q9HCU4 2923 aa2.75□□□□□ -1.97
SCN3A-202ENST00000360093 ZANQ9Y493 2812 aa2.74□□□□□ -1.97
SCN3A-202ENST00000360093 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
SCN3A-202ENST00000360093 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
SCN3A-202ENST00000360093 ADM2Q7Z4H4 148 aa2.74□□□□□ -1.97
SCN3A-202ENST00000360093 TENM4Q6N022 2769 aa2.74□□□□□ -1.97
SCN3A-202ENST00000360093 ASH1LQ9NR48 2969 aaKnown RBP2.74□□□□□ -1.97
SCN3A-202ENST00000360093 MXRA5Q9NR99 2828 aa2.72□□□□□ -1.97
SCN3A-202ENST00000360093 DCHS2Q6V1P9 2916 aa2.72□□□□□ -1.97
SCN3A-202ENST00000360093 A8MUU9 505 aa2.72□□□□□ -1.97
SCN3A-202ENST00000360093 DMDP11532 3685 aa2.71□□□□□ -1.98
SCN3A-202ENST00000360093 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
SCN3A-202ENST00000360093 SPATA8Q6RVD6 105 aa2.71□□□□□ -1.98
SCN3A-202ENST00000360093 MYO15AQ9UKN7 3530 aa2.71□□□□□ -1.98
SCN3A-202ENST00000360093 ZFHX4Q86UP3 3567 aa2.7□□□□□ -1.98
SCN3A-202ENST00000360093 NF1P21359 2839 aa2.69□□□□□ -1.98
SCN3A-202ENST00000360093 FBN2P35556 2912 aa2.68□□□□□ -1.98
SCN3A-202ENST00000360093 CELSR1Q9NYQ6 3014 aa2.67□□□□□ -1.98
SCN3A-202ENST00000360093 KRTAP1-4P0C5Y4 121 aa2.66□□□□□ -1.98
SCN3A-202ENST00000360093 WDFY3Q8IZQ1 3526 aa2.66□□□□□ -1.98
SCN3A-202ENST00000360093 NBPF19A0A087WUL8 3843 aa2.66□□□□□ -1.98
SCN3A-202ENST00000360093 TPRXLQ17RH7 258 aa2.65□□□□□ -1.99
SCN3A-202ENST00000360093 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
SCN3A-202ENST00000360093 ASPMQ8IZT6 3477 aa2.64□□□□□ -1.99
SCN3A-202ENST00000360093 TENM1Q9UKZ4 2725 aa2.64□□□□□ -1.99
SCN3A-202ENST00000360093 SPENQ96T58 3664 aaKnown RBP2.63□□□□□ -1.99
SCN3A-202ENST00000360093 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
SCN3A-202ENST00000360093 XP32Q5T750 250 aa2.62□□□□□ -1.99
SCN3A-202ENST00000360093 RELNP78509 3460 aa2.62□□□□□ -1.99
SCN3A-202ENST00000360093 LAMA5O15230 3695 aa2.62□□□□□ -1.99
SCN3A-202ENST00000360093 PDZD2O15018 2839 aa2.6□□□□□ -1.99
SCN3A-202ENST00000360093 SMG1Q96Q15 3661 aaKnown RBP2.59□□□□□ -1.99
SCN3A-202ENST00000360093 TNP1P09430 55 aa2.59□□□□□ -1.99
SCN3A-202ENST00000360093 A6NN06 94 aa2.59□□□□□ -2
SCN3A-202ENST00000360093 AKAP9Q99996 3911 aa2.59□□□□□ -2
SCN3A-202ENST00000360093 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
SCN3A-202ENST00000360093 A0A1B0GVY2 172 aa2.58□□□□□ -2
SCN3A-202ENST00000360093 TENM3Q9P273 2699 aa2.57□□□□□ -2
SCN3A-202ENST00000360093 A8MU10 97 aa2.57□□□□□ -2
SCN3A-202ENST00000360093 BSNQ9UPA5 3926 aa2.57□□□□□ -2
SCN3A-202ENST00000360093 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
SCN3A-202ENST00000360093 KRTAP13-3Q3SY46 172 aa2.56□□□□□ -2
SCN3A-202ENST00000360093 KRTAP17-1Q9BYP8 105 aa2.56□□□□□ -2
SCN3A-202ENST00000360093 PP632Q6XCG6 107 aa2.56□□□□□ -2
SCN3A-202ENST00000360093 KRTAP10-8P60410 259 aa2.55□□□□□ -2
SCN3A-202ENST00000360093 DCHS1Q96JQ0 3298 aa2.55□□□□□ -2
SCN3A-202ENST00000360093 VWFP04275 2813 aa2.55□□□□□ -2
SCN3A-202ENST00000360093 MUC3AQ02505 3323 aa2.54□□□□□ -2
SCN3A-202ENST00000360093 TENM2Q9NT68 2774 aa2.53□□□□□ -2
SCN3A-202ENST00000360093 ZFHX3Q15911 3703 aa2.53□□□□□ -2
SCN3A-202ENST00000360093 ANK3Q12955 4377 aaKnown RBP2.51□□□□□ -2.01
SCN3A-202ENST00000360093 PRO2289Q9P1D8 64 aa2.51□□□□□ -2.01
SCN3A-202ENST00000360093 TGP01266 2768 aa2.51□□□□□ -2.01
SCN3A-202ENST00000360093 H3BS24 57 aa2.51□□□□□ -2.01
SCN3A-202ENST00000360093 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
SCN3A-202ENST00000360093 PKD1L1Q8TDX9 2849 aa2.5□□□□□ -2.01
SCN3A-202ENST00000360093 CSMD1Q96PZ7 3565 aa2.49□□□□□ -2.01
SCN3A-202ENST00000360093 H0YAA0 97 aa2.47□□□□□ -2.01
SCN3A-202ENST00000360093 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
SCN3A-202ENST00000360093 TRRAPQ9Y4A5 3859 aa2.45□□□□□ -2.02
SCN3A-202ENST00000360093 FBN1P35555 2871 aaKnown RBP2.44□□□□□ -2.02
SCN3A-202ENST00000360093 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
SCN3A-202ENST00000360093 VPS13CQ709C8 3753 aa2.43□□□□□ -2.02
SCN3A-202ENST00000360093 P0C880 135 aa2.42□□□□□ -2.02
SCN3A-202ENST00000360093 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
SCN3A-202ENST00000360093 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
SCN3A-202ENST00000360093 CSMD2Q7Z408 3487 aa2.38□□□□□ -2.03
SCN3A-202ENST00000360093 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
SCN3A-202ENST00000360093 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
SCN3A-202ENST00000360093 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
SCN3A-202ENST00000360093 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
SCN3A-202ENST00000360093 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.03
SCN3A-202ENST00000360093 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.03
SCN3A-202ENST00000360093 KRTAP3-1Q9BYR8 98 aa2.33□□□□□ -2.04
SCN3A-202ENST00000360093 COL7A1Q02388 2944 aa2.33□□□□□ -2.04
SCN3A-202ENST00000360093 KRTAP12-2P59991 146 aa2.33□□□□□ -2.04
SCN3A-202ENST00000360093 SRRM2Q9UQ35 2752 aaKnown RBP2.32□□□□□ -2.04
SCN3A-202ENST00000360093 MT1HL1P0DM35 61 aa2.32□□□□□ -2.04
SCN3A-202ENST00000360093 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
SCN3A-202ENST00000360093 ZNF469Q96JG9 3925 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-202ENST00000360093 CUBNO60494 3623 aa2.3□□□□□ -2.04
SCN3A-202ENST00000360093 ANK2Q01484 3957 aa2.29□□□□□ -2.04
SCN3A-202ENST00000360093 KRTAP10-4P60372 401 aaPredicted RBP2.28□□□□□ -2.04
SCN3A-202ENST00000360093 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
SCN3A-202ENST00000360093 HECTD4Q9Y4D8 3996 aa2.26□□□□□ -2.05
SCN3A-202ENST00000360093 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
SCN3A-202ENST00000360093 LYSTQ99698 3801 aa2.26□□□□□ -2.05
SCN3A-202ENST00000360093 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
SCN3A-202ENST00000360093 KRTAP3-3Q9BYR6 98 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms