RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 A8MU10 97 aa6.46□□□□□ -1.38
TMC3-201ENST00000359440 STAB2Q8WWQ8 2551 aa6.44□□□□□ -1.38
TMC3-201ENST00000359440 ASH1LQ9NR48 2969 aaKnown RBP6.44□□□□□ -1.38
TMC3-201ENST00000359440 Q6ZSA8 131 aa6.44□□□□□ -1.38
TMC3-201ENST00000359440 DMDP11532 3685 aa6.41□□□□□ -1.38
TMC3-201ENST00000359440 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
TMC3-201ENST00000359440 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
TMC3-201ENST00000359440 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
TMC3-201ENST00000359440 LOC400499M0QZD8 3231 aa6.39□□□□□ -1.39
TMC3-201ENST00000359440 CFAP47Q6ZTR5 3102 aa6.38□□□□□ -1.39
TMC3-201ENST00000359440 DMXL1Q9Y485 3027 aa6.38□□□□□ -1.39
TMC3-201ENST00000359440 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
TMC3-201ENST00000359440 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
TMC3-201ENST00000359440 HIVEP1P15822 2718 aa6.37□□□□□ -1.39
TMC3-201ENST00000359440 J3QL48 77 aa6.36□□□□□ -1.39
TMC3-201ENST00000359440 CELSR2Q9HCU4 2923 aa6.36□□□□□ -1.39
TMC3-201ENST00000359440 NF1P21359 2839 aa6.33□□□□□ -1.4
TMC3-201ENST00000359440 FBN2P35556 2912 aa6.32□□□□□ -1.4
TMC3-201ENST00000359440 MXRA5Q9NR99 2828 aa6.32□□□□□ -1.4
TMC3-201ENST00000359440 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
TMC3-201ENST00000359440 DCHS2Q6V1P9 2916 aa6.29□□□□□ -1.4
TMC3-201ENST00000359440 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
TMC3-201ENST00000359440 R4GN34 69 aa6.28□□□□□ -1.4
TMC3-201ENST00000359440 A8MUU9 505 aa6.27□□□□□ -1.41
TMC3-201ENST00000359440 C20orf166-AS1Q96NR2 134 aa6.26□□□□□ -1.41
TMC3-201ENST00000359440 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
TMC3-201ENST00000359440 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.41
TMC3-201ENST00000359440 M0QZ58 72 aa6.21□□□□□ -1.42
TMC3-201ENST00000359440 Q5VSD8 79 aa6.2□□□□□ -1.42
TMC3-201ENST00000359440 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
TMC3-201ENST00000359440 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
TMC3-201ENST00000359440 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
TMC3-201ENST00000359440 KRTAP1-4P0C5Y4 121 aa6.17□□□□□ -1.42
TMC3-201ENST00000359440 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
TMC3-201ENST00000359440 CRYBG3Q68DQ2 2970 aa6.14□□□□□ -1.43
TMC3-201ENST00000359440 ZFHX4Q86UP3 3567 aa6.12□□□□□ -1.43
TMC3-201ENST00000359440 SPENQ96T58 3664 aaKnown RBP6.11□□□□□ -1.43
TMC3-201ENST00000359440 TENM3Q9P273 2699 aa6.1□□□□□ -1.43
TMC3-201ENST00000359440 H0YAA0 97 aa6.09□□□□□ -1.43
TMC3-201ENST00000359440 LAMA5O15230 3695 aa6.06□□□□□ -1.44
TMC3-201ENST00000359440 DCHS1Q96JQ0 3298 aa6.05□□□□□ -1.44
TMC3-201ENST00000359440 CELSR1Q9NYQ6 3014 aa6.04□□□□□ -1.44
TMC3-201ENST00000359440 SMG1Q96Q15 3661 aaKnown RBP6.02□□□□□ -1.45
TMC3-201ENST00000359440 TENM4Q6N022 2769 aa5.99□□□□□ -1.45
TMC3-201ENST00000359440 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
TMC3-201ENST00000359440 PDZD2O15018 2839 aa5.97□□□□□ -1.45
TMC3-201ENST00000359440 KRTAP21-3Q3LHN1 58 aa5.97□□□□□ -1.45
TMC3-201ENST00000359440 RELNP78509 3460 aa5.96□□□□□ -1.46
TMC3-201ENST00000359440 TGP01266 2768 aa5.93□□□□□ -1.46
TMC3-201ENST00000359440 TENM1Q9UKZ4 2725 aa5.92□□□□□ -1.46
TMC3-201ENST00000359440 M0R2T5 61 aa5.9□□□□□ -1.47
TMC3-201ENST00000359440 XP32Q5T750 250 aa5.9□□□□□ -1.47
TMC3-201ENST00000359440 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
TMC3-201ENST00000359440 VWFP04275 2813 aa5.87□□□□□ -1.47
TMC3-201ENST00000359440 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
TMC3-201ENST00000359440 CSMD1Q96PZ7 3565 aa5.84□□□□□ -1.47
TMC3-201ENST00000359440 P0C880 135 aa5.83□□□□□ -1.48
TMC3-201ENST00000359440 BSNQ9UPA5 3926 aa5.8□□□□□ -1.48
TMC3-201ENST00000359440 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
TMC3-201ENST00000359440 SVEP1Q4LDE5 3571 aa5.8□□□□□ -1.48
TMC3-201ENST00000359440 TNP1P09430 55 aa5.8□□□□□ -1.48
TMC3-201ENST00000359440 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
TMC3-201ENST00000359440 OTOGQ6ZRI0 2925 aa5.73□□□□□ -1.49
TMC3-201ENST00000359440 KRTAP10-8P60410 259 aa5.72□□□□□ -1.49
TMC3-201ENST00000359440 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
TMC3-201ENST00000359440 PKD1L1Q8TDX9 2849 aa5.68□□□□□ -1.5
TMC3-201ENST00000359440 ZFHX3Q15911 3703 aa5.67□□□□□ -1.5
TMC3-201ENST00000359440 A0A1B0GVY2 172 aa5.66□□□□□ -1.5
TMC3-201ENST00000359440 TENM2Q9NT68 2774 aa5.65□□□□□ -1.51
TMC3-201ENST00000359440 ANK3Q12955 4377 aaKnown RBP5.64□□□□□ -1.51
TMC3-201ENST00000359440 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
TMC3-201ENST00000359440 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
TMC3-201ENST00000359440 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
TMC3-201ENST00000359440 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
TMC3-201ENST00000359440 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
TMC3-201ENST00000359440 FBN3Q75N90 2809 aa5.54□□□□□ -1.52
TMC3-201ENST00000359440 SRRM2Q9UQ35 2752 aaKnown RBP5.54□□□□□ -1.52
TMC3-201ENST00000359440 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
TMC3-201ENST00000359440 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
TMC3-201ENST00000359440 CSMD2Q7Z408 3487 aa5.48□□□□□ -1.53
TMC3-201ENST00000359440 CUBNO60494 3623 aa5.47□□□□□ -1.53
TMC3-201ENST00000359440 NBPF19A0A087WUL8 3843 aa5.47□□□□□ -1.53
TMC3-201ENST00000359440 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
TMC3-201ENST00000359440 TRRAPQ9Y4A5 3859 aa5.4□□□□□ -1.54
TMC3-201ENST00000359440 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.55
TMC3-201ENST00000359440 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
TMC3-201ENST00000359440 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
TMC3-201ENST00000359440 HUWE1Q7Z6Z7 4374 aaKnown RBP5.29□□□□□ -1.56
TMC3-201ENST00000359440 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
TMC3-201ENST00000359440 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
TMC3-201ENST00000359440 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
TMC3-201ENST00000359440 ZNF469Q96JG9 3925 aaPredicted RBP5.24□□□□□ -1.57
TMC3-201ENST00000359440 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
TMC3-201ENST00000359440 MT1HL1P0DM35 61 aa5.23□□□□□ -1.57
TMC3-201ENST00000359440 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
TMC3-201ENST00000359440 DNAH9Q9NYC9 4486 aa5.06□□□□□ -1.6
TMC3-201ENST00000359440 INE1O15225 51 aa5.04□□□□□ -1.6
TMC3-201ENST00000359440 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
TMC3-201ENST00000359440 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
TMC3-201ENST00000359440 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms