RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 LINC00846Q9NV44 126 aa2.67□□□□□ -1.98
CCL20-201ENST00000358813 TMEM218A2RU14 115 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 LINC01549A6NIU2 74 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 K7EMI3 77 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 SPINK8P0C7L1 97 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 LINC00158P58513 81 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 SSBP3-AS1Q7Z2R9 100 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 ERG28Q9UKR5 140 aa2.66□□□□□ -1.98
CCL20-201ENST00000358813 APOC3P02656 99 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 COX17Q14061 63 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 Q8N8P6 123 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 CHCHD1Q96BP2 118 aaKnown RBP2.65□□□□□ -1.99
CCL20-201ENST00000358813 ZNF625Q96I27 306 aaPredicted RBP2.65□□□□□ -1.99
CCL20-201ENST00000358813 SMCO4Q9NRQ5 59 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 HSPB8Q9UJY1 196 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 V9GYV3 84 aa2.65□□□□□ -1.99
CCL20-201ENST00000358813 C9JAW5 83 aa2.64□□□□□ -1.99
CCL20-201ENST00000358813 NCR3O14931 201 aa2.64□□□□□ -1.99
CCL20-201ENST00000358813 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
CCL20-201ENST00000358813 AMELXQ99217 191 aa2.64□□□□□ -1.99
CCL20-201ENST00000358813 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
CCL20-201ENST00000358813 SMIM27A0A1W2PRY6 76 aa2.63□□□□□ -1.99
CCL20-201ENST00000358813 H3BMG7 143 aa2.63□□□□□ -1.99
CCL20-201ENST00000358813 S100A7L2Q5SY68 101 aa2.63□□□□□ -1.99
CCL20-201ENST00000358813 SEC11CQ9BY50 192 aa2.63□□□□□ -1.99
CCL20-201ENST00000358813 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
CCL20-201ENST00000358813 LINC00587B1AMM8 73 aa2.62□□□□□ -1.99
CCL20-201ENST00000358813 ADCYAP1P18509 176 aa2.62□□□□□ -1.99
CCL20-201ENST00000358813 TMEM170BQ5T4T1 132 aa2.62□□□□□ -1.99
CCL20-201ENST00000358813 SVBPQ8N300 66 aa2.62□□□□□ -1.99
CCL20-201ENST00000358813 TRBV20-1A0A075B6N2 111 aa2.61□□□□□ -1.99
CCL20-201ENST00000358813 IGIPA6NJ69 53 aa2.61□□□□□ -1.99
CCL20-201ENST00000358813 MT-ND4LP03901 98 aa2.61□□□□□ -1.99
CCL20-201ENST00000358813 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CCL20-201ENST00000358813 BRK1Q8WUW1 75 aa2.61□□□□□ -1.99
CCL20-201ENST00000358813 Q1T7F1 81 aa2.6□□□□□ -1.99
CCL20-201ENST00000358813 ATP11AUNQ6ZP68 121 aa2.6□□□□□ -1.99
CCL20-201ENST00000358813 TMEM254Q8TBM7 123 aa2.6□□□□□ -1.99
CCL20-201ENST00000358813 TRAV12-1A0A0B4J245 112 aa2.59□□□□□ -1.99
CCL20-201ENST00000358813 S100PP25815 95 aa2.59□□□□□ -1.99
CCL20-201ENST00000358813 ROMO1P60602 79 aa2.59□□□□□ -1.99
CCL20-201ENST00000358813 Q5XG85 94 aa2.59□□□□□ -1.99
CCL20-201ENST00000358813 KCNQ1DNQ9H478 68 aa2.59□□□□□ -1.99
CCL20-201ENST00000358813 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
CCL20-201ENST00000358813 hDV103S1A0JD37 113 aa2.58□□□□□ -2
CCL20-201ENST00000358813 C20orf202A1L168 122 aa2.58□□□□□ -2
CCL20-201ENST00000358813 Q6ZRX8 168 aa2.58□□□□□ -2
CCL20-201ENST00000358813 FABP4P15090 132 aa2.57□□□□□ -2
CCL20-201ENST00000358813 RPL37P61927 97 aaKnown RBP2.57□□□□□ -2
CCL20-201ENST00000358813 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
CCL20-201ENST00000358813 TRAV23DV6A0A075B6W5 121 aa2.56□□□□□ -2
CCL20-201ENST00000358813 MYMXA0A1B0GTQ4 84 aa2.56□□□□□ -2
CCL20-201ENST00000358813 SMIM13P0DJ93 91 aa2.56□□□□□ -2
CCL20-201ENST00000358813 IGLC3P0DOY3 106 aa2.56□□□□□ -2
CCL20-201ENST00000358813 BAGE3Q86Y29 109 aa2.56□□□□□ -2
CCL20-201ENST00000358813 PRO1933Q9H354 126 aa2.56□□□□□ -2
CCL20-201ENST00000358813 F8WEM9 126 aa2.55□□□□□ -2
CCL20-201ENST00000358813 SPRR1AP35321 89 aa2.55□□□□□ -2
CCL20-201ENST00000358813 AKR1D1P51857 326 aa2.55□□□□□ -2
CCL20-201ENST00000358813 KRTAP10-10P60014 251 aa2.55□□□□□ -2
CCL20-201ENST00000358813 RAB37Q96AX2 223 aa2.55□□□□□ -2
CCL20-201ENST00000358813 A0A087WSZ3 146 aa2.54□□□□□ -2
CCL20-201ENST00000358813 UQCRQO14949 82 aa2.54□□□□□ -2
CCL20-201ENST00000358813 ERC2-IT1O76042 136 aa2.54□□□□□ -2
CCL20-201ENST00000358813 HBDP02042 147 aa2.54□□□□□ -2
CCL20-201ENST00000358813 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
CCL20-201ENST00000358813 COA5Q86WW8 74 aa2.54□□□□□ -2
CCL20-201ENST00000358813 DEFB105AQ8NG35 78 aa2.54□□□□□ -2
CCL20-201ENST00000358813 J3QR89 54 aa2.53□□□□□ -2
CCL20-201ENST00000358813 SMIM6P0DI80 62 aa2.52□□□□□ -2.01
CCL20-201ENST00000358813 C12orf57Q99622 126 aa2.52□□□□□ -2.01
CCL20-201ENST00000358813 VPS25Q9BRG1 176 aa2.52□□□□□ -2.01
CCL20-201ENST00000358813 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
CCL20-201ENST00000358813 TRACP01848 142 aa2.51□□□□□ -2.01
CCL20-201ENST00000358813 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
CCL20-201ENST00000358813 CLEC2BQ92478 149 aa2.51□□□□□ -2.01
CCL20-201ENST00000358813 NPC2P61916 151 aa2.5□□□□□ -2.01
CCL20-201ENST00000358813 OBSCN-AS1Q96MR7 158 aa2.5□□□□□ -2.01
CCL20-201ENST00000358813 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
CCL20-201ENST00000358813 COX7BP24311 80 aa2.49□□□□□ -2.01
CCL20-201ENST00000358813 PMCHL1Q16048 86 aa2.49□□□□□ -2.01
CCL20-201ENST00000358813 C18orf32Q8TCD1 76 aa2.48□□□□□ -2.01
CCL20-201ENST00000358813 IFI27L1Q96BM0 104 aa2.48□□□□□ -2.01
CCL20-201ENST00000358813 Q96NJ1 140 aa2.48□□□□□ -2.01
CCL20-201ENST00000358813 LINC01546A6NGU7 62 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 ZNF815PA8K554 130 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 SPRR1BP22528 89 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 PLNP26678 52 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CCL20-201ENST00000358813 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
CCL20-201ENST00000358813 COPS9Q8WXC6 57 aa2.46□□□□□ -2.02
CCL20-201ENST00000358813 SPANXDQ9BXN6 97 aa2.46□□□□□ -2.02
CCL20-201ENST00000358813 K7ERU9 68 aa2.45□□□□□ -2.02
CCL20-201ENST00000358813 ELOF1P60002 83 aaKnown RBP2.45□□□□□ -2.02
CCL20-201ENST00000358813 KRTDAPP60985 99 aa2.45□□□□□ -2.02
CCL20-201ENST00000358813 Q6JHZ5 121 aa2.45□□□□□ -2.02
CCL20-201ENST00000358813 USH2AO75445 5202 aa2.45□□□□□ -2.02
CCL20-201ENST00000358813 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
CCL20-201ENST00000358813 DLEU1O43261 78 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms