RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 Q6ZSA8 131 aa8.57□□□□□ -1.04
SLC6A20-202ENST00000358525 KMT2BQ9UMN6 2715 aaPredicted RBP8.57□□□□□ -1.04
SLC6A20-202ENST00000358525 DCHS2Q6V1P9 2916 aa8.55□□□□□ -1.04
SLC6A20-202ENST00000358525 NF1P21359 2839 aa8.53□□□□□ -1.04
SLC6A20-202ENST00000358525 DMAC1Q96GE9 116 aa8.52□□□□□ -1.04
SLC6A20-202ENST00000358525 LCE6AA0A183 80 aa8.52□□□□□ -1.05
SLC6A20-202ENST00000358525 DCHS1Q96JQ0 3298 aa8.51□□□□□ -1.05
SLC6A20-202ENST00000358525 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
SLC6A20-202ENST00000358525 Q5VSD8 79 aa8.47□□□□□ -1.05
SLC6A20-202ENST00000358525 PRAC1Q96KF2 57 aa8.46□□□□□ -1.05
SLC6A20-202ENST00000358525 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
SLC6A20-202ENST00000358525 S4R3F8 94 aa8.45□□□□□ -1.06
SLC6A20-202ENST00000358525 MXRA5Q9NR99 2828 aa8.41□□□□□ -1.06
SLC6A20-202ENST00000358525 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
SLC6A20-202ENST00000358525 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
SLC6A20-202ENST00000358525 SMG1Q96Q15 3661 aaKnown RBP8.37□□□□□ -1.07
SLC6A20-202ENST00000358525 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
SLC6A20-202ENST00000358525 CSMD1Q96PZ7 3565 aa8.35□□□□□ -1.07
SLC6A20-202ENST00000358525 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
SLC6A20-202ENST00000358525 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
SLC6A20-202ENST00000358525 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
SLC6A20-202ENST00000358525 CAMK2N1Q7Z7J9 78 aa8.25□□□□□ -1.09
SLC6A20-202ENST00000358525 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
SLC6A20-202ENST00000358525 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
SLC6A20-202ENST00000358525 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.09
SLC6A20-202ENST00000358525 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.1
SLC6A20-202ENST00000358525 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SLC6A20-202ENST00000358525 R4GN34 69 aa8.19□□□□□ -1.1
SLC6A20-202ENST00000358525 A8MU10 97 aa8.17□□□□□ -1.1
SLC6A20-202ENST00000358525 M0R2T5 61 aa8.16□□□□□ -1.1
SLC6A20-202ENST00000358525 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.1
SLC6A20-202ENST00000358525 TENM3Q9P273 2699 aa8.13□□□□□ -1.11
SLC6A20-202ENST00000358525 ROMO1P60602 79 aa8.13□□□□□ -1.11
SLC6A20-202ENST00000358525 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
SLC6A20-202ENST00000358525 A6NN06 94 aa8.11□□□□□ -1.11
SLC6A20-202ENST00000358525 M0QZ58 72 aa8.1□□□□□ -1.11
SLC6A20-202ENST00000358525 PDZD2O15018 2839 aa8.1□□□□□ -1.11
SLC6A20-202ENST00000358525 NBPF19A0A087WUL8 3843 aa8.08□□□□□ -1.12
SLC6A20-202ENST00000358525 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
SLC6A20-202ENST00000358525 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
SLC6A20-202ENST00000358525 SPENQ96T58 3664 aaKnown RBP8.04□□□□□ -1.12
SLC6A20-202ENST00000358525 TENM1Q9UKZ4 2725 aa8.03□□□□□ -1.12
SLC6A20-202ENST00000358525 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
SLC6A20-202ENST00000358525 A8MUU9 505 aa7.99□□□□□ -1.13
SLC6A20-202ENST00000358525 KRTAP21-3Q3LHN1 58 aa7.99□□□□□ -1.13
SLC6A20-202ENST00000358525 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
SLC6A20-202ENST00000358525 BSNQ9UPA5 3926 aa7.96□□□□□ -1.14
SLC6A20-202ENST00000358525 VWFP04275 2813 aa7.92□□□□□ -1.14
SLC6A20-202ENST00000358525 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
SLC6A20-202ENST00000358525 ANK3Q12955 4377 aaKnown RBP7.88□□□□□ -1.15
SLC6A20-202ENST00000358525 H3BS24 57 aa7.88□□□□□ -1.15
SLC6A20-202ENST00000358525 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
SLC6A20-202ENST00000358525 CUBNO60494 3623 aa7.87□□□□□ -1.15
SLC6A20-202ENST00000358525 KRTAP25-1Q3LHN0 102 aa7.86□□□□□ -1.15
SLC6A20-202ENST00000358525 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
SLC6A20-202ENST00000358525 CSMD2Q7Z408 3487 aa7.85□□□□□ -1.15
SLC6A20-202ENST00000358525 FBN1P35555 2871 aaKnown RBP7.84□□□□□ -1.15
SLC6A20-202ENST00000358525 XP32Q5T750 250 aa7.78□□□□□ -1.16
SLC6A20-202ENST00000358525 ZFHX3Q15911 3703 aa7.78□□□□□ -1.16
SLC6A20-202ENST00000358525 PKD1L1Q8TDX9 2849 aa7.74□□□□□ -1.17
SLC6A20-202ENST00000358525 TGP01266 2768 aa7.74□□□□□ -1.17
SLC6A20-202ENST00000358525 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
SLC6A20-202ENST00000358525 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
SLC6A20-202ENST00000358525 H0YAA0 97 aa7.68□□□□□ -1.18
SLC6A20-202ENST00000358525 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
SLC6A20-202ENST00000358525 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
SLC6A20-202ENST00000358525 A0A0A0MQY5 61 aa7.58□□□□□ -1.2
SLC6A20-202ENST00000358525 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
SLC6A20-202ENST00000358525 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
SLC6A20-202ENST00000358525 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
SLC6A20-202ENST00000358525 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
SLC6A20-202ENST00000358525 P0C880 135 aa7.48□□□□□ -1.21
SLC6A20-202ENST00000358525 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
SLC6A20-202ENST00000358525 TNP1P09430 55 aa7.43□□□□□ -1.22
SLC6A20-202ENST00000358525 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
SLC6A20-202ENST00000358525 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
SLC6A20-202ENST00000358525 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
SLC6A20-202ENST00000358525 SRRM2Q9UQ35 2752 aaKnown RBP7.32□□□□□ -1.24
SLC6A20-202ENST00000358525 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
SLC6A20-202ENST00000358525 ZNF469Q96JG9 3925 aaPredicted RBP7.31□□□□□ -1.24
SLC6A20-202ENST00000358525 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
SLC6A20-202ENST00000358525 AKAP9Q99996 3911 aa7.25□□□□□ -1.25
SLC6A20-202ENST00000358525 KRTAP12-2P59991 146 aa7.21□□□□□ -1.25
SLC6A20-202ENST00000358525 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
SLC6A20-202ENST00000358525 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
SLC6A20-202ENST00000358525 KRTAP12-1P59990 96 aa7.09□□□□□ -1.28
SLC6A20-202ENST00000358525 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
SLC6A20-202ENST00000358525 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
SLC6A20-202ENST00000358525 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
SLC6A20-202ENST00000358525 DNAH9Q9NYC9 4486 aa7.03□□□□□ -1.28
SLC6A20-202ENST00000358525 KRTAP10-4P60372 401 aaPredicted RBP6.99□□□□□ -1.29
SLC6A20-202ENST00000358525 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
SLC6A20-202ENST00000358525 ALMS1Q8TCU4 4167 aa6.89□□□□□ -1.31
SLC6A20-202ENST00000358525 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
SLC6A20-202ENST00000358525 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
SLC6A20-202ENST00000358525 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
SLC6A20-202ENST00000358525 DNAH1Q9P2D7 4330 aa6.87□□□□□ -1.31
SLC6A20-202ENST00000358525 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
SLC6A20-202ENST00000358525 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
SLC6A20-202ENST00000358525 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 321.1 ms