RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 REV3LO60673 3130 aa8.27□□□□□ -1.09
PCNX3-201ENST00000355703 TEP1Q99973 2627 aaKnown RBP8.26□□□□□ -1.09
PCNX3-201ENST00000355703 NOTCH1P46531 2555 aa8.25□□□□□ -1.09
PCNX3-201ENST00000355703 COL6A3P12111 3177 aa8.23□□□□□ -1.09
PCNX3-201ENST00000355703 BOD1L1Q8NFC6 3051 aa8.23□□□□□ -1.09
PCNX3-201ENST00000355703 KMT2BQ9UMN6 2715 aaPredicted RBP8.21□□□□□ -1.1
PCNX3-201ENST00000355703 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
PCNX3-201ENST00000355703 CFAP47Q6ZTR5 3102 aa8.19□□□□□ -1.1
PCNX3-201ENST00000355703 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
PCNX3-201ENST00000355703 KRTAP13-1Q8IUC0 172 aa8.14□□□□□ -1.11
PCNX3-201ENST00000355703 BAHCC1Q9P281 2608 aa8.14□□□□□ -1.11
PCNX3-201ENST00000355703 H0YAA0 97 aa8.13□□□□□ -1.11
PCNX3-201ENST00000355703 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
PCNX3-201ENST00000355703 DMXL2Q8TDJ6 3036 aa8.13□□□□□ -1.11
PCNX3-201ENST00000355703 KALRNO60229 2985 aa8.09□□□□□ -1.11
PCNX3-201ENST00000355703 TACC2O95359 2948 aa8.09□□□□□ -1.11
PCNX3-201ENST00000355703 SPTBN5Q9NRC6 3674 aaKnown RBP8.08□□□□□ -1.12
PCNX3-201ENST00000355703 ZNF292O60281 2723 aa8.06□□□□□ -1.12
PCNX3-201ENST00000355703 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
PCNX3-201ENST00000355703 LOC400499M0QZD8 3231 aa8.04□□□□□ -1.12
PCNX3-201ENST00000355703 IGSF10Q6WRI0 2623 aa8.03□□□□□ -1.12
PCNX3-201ENST00000355703 ATMQ13315 3056 aa8.01□□□□□ -1.13
PCNX3-201ENST00000355703 ZZEF1O43149 2961 aa7.97□□□□□ -1.13
PCNX3-201ENST00000355703 WDFY3Q8IZQ1 3526 aa7.96□□□□□ -1.14
PCNX3-201ENST00000355703 GCN1Q92616 2671 aaKnown RBP7.96□□□□□ -1.14
PCNX3-201ENST00000355703 NBEAL2Q6ZNJ1 2754 aa7.95□□□□□ -1.14
PCNX3-201ENST00000355703 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
PCNX3-201ENST00000355703 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
PCNX3-201ENST00000355703 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
PCNX3-201ENST00000355703 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
PCNX3-201ENST00000355703 DCHS1Q96JQ0 3298 aa7.87□□□□□ -1.15
PCNX3-201ENST00000355703 LRBAP50851 2863 aa7.86□□□□□ -1.15
PCNX3-201ENST00000355703 ITPR2Q14571 2701 aa7.86□□□□□ -1.15
PCNX3-201ENST00000355703 MUC3AQ02505 3323 aa7.82□□□□□ -1.16
PCNX3-201ENST00000355703 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
PCNX3-201ENST00000355703 APCP25054 2843 aa7.79□□□□□ -1.16
PCNX3-201ENST00000355703 DMXL1Q9Y485 3027 aa7.79□□□□□ -1.16
PCNX3-201ENST00000355703 ASPMQ8IZT6 3477 aa7.77□□□□□ -1.17
PCNX3-201ENST00000355703 FLNCQ14315 2725 aa7.77□□□□□ -1.17
PCNX3-201ENST00000355703 ASH1LQ9NR48 2969 aaKnown RBP7.77□□□□□ -1.17
PCNX3-201ENST00000355703 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
PCNX3-201ENST00000355703 TNRC18O15417 2968 aaPredicted RBP7.73□□□□□ -1.17
PCNX3-201ENST00000355703 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
PCNX3-201ENST00000355703 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
PCNX3-201ENST00000355703 UBR5O95071 2799 aaPredicted RBP7.65□□□□□ -1.19
PCNX3-201ENST00000355703 ZFHX4Q86UP3 3567 aa7.62□□□□□ -1.19
PCNX3-201ENST00000355703 DMDP11532 3685 aa7.59□□□□□ -1.19
PCNX3-201ENST00000355703 LAMA5O15230 3695 aa7.58□□□□□ -1.2
PCNX3-201ENST00000355703 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
PCNX3-201ENST00000355703 NF1P21359 2839 aa7.55□□□□□ -1.2
PCNX3-201ENST00000355703 RELNP78509 3460 aa7.54□□□□□ -1.2
PCNX3-201ENST00000355703 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
PCNX3-201ENST00000355703 UTP20O75691 2785 aaKnown RBP7.48□□□□□ -1.21
PCNX3-201ENST00000355703 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
PCNX3-201ENST00000355703 FBN2P35556 2912 aa7.47□□□□□ -1.21
PCNX3-201ENST00000355703 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
PCNX3-201ENST00000355703 HRNRQ86YZ3 2850 aaPredicted RBP7.46□□□□□ -1.21
PCNX3-201ENST00000355703 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
PCNX3-201ENST00000355703 CELSR2Q9HCU4 2923 aa7.43□□□□□ -1.22
PCNX3-201ENST00000355703 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
PCNX3-201ENST00000355703 CSMD1Q96PZ7 3565 aa7.39□□□□□ -1.23
PCNX3-201ENST00000355703 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
PCNX3-201ENST00000355703 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
PCNX3-201ENST00000355703 TENM1Q9UKZ4 2725 aa7.36□□□□□ -1.23
PCNX3-201ENST00000355703 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
PCNX3-201ENST00000355703 MXRA5Q9NR99 2828 aa7.35□□□□□ -1.23
PCNX3-201ENST00000355703 CUBNO60494 3623 aa7.33□□□□□ -1.24
PCNX3-201ENST00000355703 TENM4Q6N022 2769 aa7.32□□□□□ -1.24
PCNX3-201ENST00000355703 TENM2Q9NT68 2774 aa7.29□□□□□ -1.24
PCNX3-201ENST00000355703 SVEP1Q4LDE5 3571 aa7.28□□□□□ -1.24
PCNX3-201ENST00000355703 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
PCNX3-201ENST00000355703 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
PCNX3-201ENST00000355703 NIPBLQ6KC79 2804 aaeCLIP7.21□□□□□ -1.266e-10■■■■■ 29
PCNX3-201ENST00000355703 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
PCNX3-201ENST00000355703 TGP01266 2768 aa7.15□□□□□ -1.26
PCNX3-201ENST00000355703 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
PCNX3-201ENST00000355703 INE1O15225 51 aa7.09□□□□□ -1.27
PCNX3-201ENST00000355703 PDZD2O15018 2839 aa7.05□□□□□ -1.28
PCNX3-201ENST00000355703 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
PCNX3-201ENST00000355703 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
PCNX3-201ENST00000355703 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
PCNX3-201ENST00000355703 VWFP04275 2813 aa6.98□□□□□ -1.29
PCNX3-201ENST00000355703 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.29
PCNX3-201ENST00000355703 PKD1L1Q8TDX9 2849 aa6.94□□□□□ -1.3
PCNX3-201ENST00000355703 FBN1P35555 2871 aaKnown RBP6.84□□□□□ -1.31
PCNX3-201ENST00000355703 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
PCNX3-201ENST00000355703 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
PCNX3-201ENST00000355703 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
PCNX3-201ENST00000355703 BSNQ9UPA5 3926 aa6.72□□□□□ -1.33
PCNX3-201ENST00000355703 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
PCNX3-201ENST00000355703 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
PCNX3-201ENST00000355703 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
PCNX3-201ENST00000355703 VPS13CQ709C8 3753 aa6.57□□□□□ -1.36
PCNX3-201ENST00000355703 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
PCNX3-201ENST00000355703 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
PCNX3-201ENST00000355703 FBN3Q75N90 2809 aa6.49□□□□□ -1.37
PCNX3-201ENST00000355703 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
PCNX3-201ENST00000355703 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
PCNX3-201ENST00000355703 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
PCNX3-201ENST00000355703 SPRR2EP22531 72 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms